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CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

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Page 1: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism

General, Organic, & Biological ChemistryJanice Gorzynski Smith

Page 2: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

2

CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism

Learning Objectives: Role in Metabolism of fatty acid oxidation, glycolysis, & Amino acid

catabolism Reactions catalyzed by: kinase, isomerase, dehydrogenase, decarboxylase,

carboxylase Glycolysis: steps & net reaction Pyruvate conversion to acetyl Coenzyme A Gluconeogenesis: steps in synthesis of glucose Catabolism of Triacylglycerols: beta-oxidation Synthesis of ketone bodies: ketogenesis Catabolism of Amino acids:

transamination & oxidative deamination Ketogenic vs glucogenic amino acid catabolism

CH 24 Homework:End of Chapter problems: 30, 36, 38, 42, 47, 52, 58, 60, 64, 68, 71, 75, 76, 78, 80, 82, 96, 98

Page 3: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Metabolism

3

Step 2 of Metabolism

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

• Fatty acid oxidation

• Glycolysis

• Amino Acid Catabolism

All lead to the production of Acetyl CoA

Page 4: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

•In the catabolism of carbohydrates, glycolysis converts glucose into pyruvate, which is then metabolized into acetyl CoA.

Metabolism Step 2 of Metabolism

Page 5: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Metabolism Step 2 of Metabolism

•In the catabolism of lipids, fatty acids are converted into thioesters and then cleaved into many acetyl CoA units.

Page 6: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Metabolism Step 2 of Metabolism

•Amino acids are usually reassembled into new proteins.

•Since excess amino acids are not stored in the body, they can also be catabolized for energy.

•The amino groups (NH2) are converted to urea [(NH2)2C=O], which is excreted in urine.

Page 7: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Metabolism Step 2 of Metabolism: Urea Cycle

http://www.t3portal.org/T3_Portal_v1/!SSL!/WebHelp/ales_vancura Catabolism_of_amino_acids.htm

Page 8: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Biochemical Rxns

Common Enzymes

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed. 8

Page 9: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Biochemical Rxns

Common Enzymes: Example

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed. 9

•The transfer of a phosphate unit from ATP to the fructose 6-phosphate molecule is catalyzed by a kinase enzyme.

Page 10: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Definition

10Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Glycolysis is a linear, 10-step anaerobic pathway that converts glucose into two molecules of pyruvate.

•Steps [1] – [5] comprise the energy investment phase, where 2 ATP molecules are hydrolyzed.

•Steps [6] – [10] comprise the energy-generating phase, producing 1 NADH and 2 ATPs for each pyruvate formed.

•The 6-carbon glucose molecule is converted into two 3-carbon segments.

Page 11: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Energy Investment

11Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

Page 12: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Energy Generation

12Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

Page 13: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 1

13Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Step [1] begins with the phosphorylation of glucose into glucose 6-phosphate, using an ATP and a kinase enzyme.

Page 14: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 2

14Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Step [2] isomerizes glucose 6-phosphate to fructose 6-phosphate with an isomerase enzyme.

Page 15: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 3

15Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Step [3] is the phosphorylation of fructose 6-phosphate into fructose 1,6-bisphosphate with a kinase enzyme.

Steps [1-3] add 2 phosphate groups and isomerize a 6-membered ring into a 5-membered ring. Energy is stored as 2 ATP molecules.

Page 16: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 4

16Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Step [4] cleaves the fructose ring into a dihydroxy- acetone phosphate and a glyceraldehyde 3-phosphate.

Page 17: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 5

17Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•Step [5] isomerizes the dihydroxyacetone phosphate into another glyceraldehyde 3-phosphate.

•Thus, the first phase of glycolysis converts glucose into 2 glyceraldehyde 3-phosphate units.

Page 18: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 6

18Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•In step [6] the aldehyde end of the molecule is oxidized and phosphorylated by a dehydrogenase enzyme and NAD+; this produces 1,3-bisphospho- glycerate and NADH.

Page 19: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 7

19Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•In step [7], the phosphate group is transferred onto an ADP with a kinase enzyme, forming 3-phosphoglycerate and ATP.

Page 20: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 8

20Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•In step [8], the phosphate group is isomerized to a new position in 2-phosphoglycerate.

Page 21: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 9

21Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•In step [9], water is lost to form phosphoenol- pyruvate.

Page 22: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Step 10

22Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•In step [10], the phosphate is transferred to an ADP,yielding pyruvate and ATP with a kinase enzyme.

•The 2 glyceraldehyde 3-phosphate units are converted into 2 pyruvate units in Phase two of glycolysis.

•Overall, the energy-generating phase forms 2 NADHs and 4 ATPs.

Page 23: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis Overall Reaction

23Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

•2 ATPs are used in phase one of glycolysis, and 4 ATPs are made in phase two of glycolysis.

•The net result is the synthesis of 2 ATPs from glycolysis

•The 2 NADHs formed are made in the cytoplasm and must be transported to the mitochondria to join the electron transport chain and make ATP.

Page 24: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Pyruvate can be converted into three possibleproducts depending on the conditions and the organism.

under aerobicconditions

under anaerobicconditions

in fermentationby microorganisms

Glycolysis Pyruvate

24Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

Page 25: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis ATP Yield

25Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

Page 26: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Glycolysis ATP Yield

26Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed.

2 x 2.5 ATP = 5 ATP

2 x 2.5 ATP = 5 ATP

2 ATP 6 x 2.5 = 15 ATP

2 x 1.5 = 3 ATP

Page 27: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Gluconeogenesis Definition

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed. 27

•Gluconeogenesis is the synthesis of glucose from noncarbohydrate sources—lactate, amino acids, or glycerol.

•Gluconeogenesis is an anabolic pathway since it results in the synthesis of larger molecules from smaller ones.

Page 28: CHAPTER 24: Carbohydrate, Lipid, & Protein Metabolism General, Organic, & Biological Chemistry Janice Gorzynski Smith

Gluconeogenesis Cori Cycle

Smith, Janice Gorzynski. General, Organic, & Biological Chemistry 2nd Ed. 28