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CARBON NANOTUBES SYNTHESIS USING DOUBLE STAGE CHEMICAL VAPOR DEPOSITION (DS-CVD) FOR SKIM LATEX PROTEIN SEPARATION BY MUBARAK MUJAWAR A thesis submitted in fulfilment of the requirement for the degree of Master of Science (Biotechnology Engineering) Kulliyyah of Engineering International Islamic University Malaysia APRIL 2010

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CARBON NANOTUBES SYNTHESIS USING

DOUBLE STAGE CHEMICAL VAPOR

DEPOSITION (DS-CVD) FOR SKIM LATEX

PROTEIN SEPARATION

BY

MUBARAK MUJAWAR

A thesis submitted in fulfilment of the requirement

for the degree of Master of Science (Biotechnology

Engineering)

Kulliyyah of Engineering

International Islamic University Malaysia

APRIL 2010

ii

ABSTRACT

Carbon nanotubes (CNTs) are one of the most exciting discoveries in nanoscale

sciences. The interest in CNTs is increasing due to their unique properties, large

surface area and wide range of application in biomedical and bio-engineering aspects.

The present work aims to demonstrate the optimized production of CNTs using

fabricated Double Stage Chemical Vapor Deposition (DS-CVD) followed by the

evaluation of its application in protein purification. To optimize the process

parameters of CNTs production with respect to achieving high purity and yield, a

statistical approach using Design Expert software was adopted. The operating

parameters namely reaction time, reaction temperature and flow rates of the precursor

gases, C2H2 and H2 were varied for production optimization. The CNTs produced

were analyzed for purity and morphology using Field Emission Scanning Electron

Microscope (FESEM), Transmission Electron Microscope (TEM) and Thermo

Gravimetric Analysis (TGA). Before they were applied for protein purification, CNTs

were submitted for acid purification and functionalization. In order to evaluate the

capacity of CNTs in protein purification, skim latex serum was used as model protein.

Skim latex serum is recovered from skim latex, a by-product of natural latex

concentrate industries, which are usually considered as a waste, thus lavishly thrown

away. CNTs were used as the column chromatographic media and its nanosized

structure will lead to separation of protein from skim latex. As the column

chromatographic media, CNTs were used after covalent and non-covalent

functionalization and the ability was compared with the non-functionalized ones.

Guided by the functional groups available on the surface, CNTs were used differently;

functionalized CNTs as in Ion Exchange Chromatography (IEC) media and non-

functionalized CNTs as in Hydrophobic Interaction Chromatography (HIC) media.

For optimization of the purification process, the pH as well as the salt concentration of

running buffer were varied. CNTs have been successfully produced by DS-CVD and

the statistical analysis reveals that the optimized conditions for the best yield of CNTs

production is 850°C reaction temperature, 60 mins reaction time with gases flow rates

of 40 and 150 ml/min for C2H2 and H2 respectively. The TGA analysis shows that the

purity of CNTs produced as about 95% purity. FESEM and TEM analyses reveal that

the uniformly dispersed CNTs have diameters ranging from 35 to 45nm. This work

further demonstrated that CNTs can perform as IEC and HIC column

chromatographic media. Chromatographic separation of our skim latex protein shows

that CNTs can be used as HIC media as compared to IEC. Results show that as usual

the efficiency of the protein purification is dependent upon pH and ionic strength of

the running buffer. In HIC, bound protein was observed most when chromatography

was carried out with 50mM Tris-HCl, pH 7, and using 2M ammonium sulphate as the

neutral salt. This study concludes that CNTs produced can be replace the high cost

commercialized HIC media in up-scale process. The nano -sized structured CNTs

leads to functioning as a better chromatographic media than the commercialized

product. CNTs have many uses and this work adds to another dimension in the

numerous applications of CNTs.

iii

CNTs

CNTs

CNTs

(DS-CVD)

Design ExpertCNTs

C2H2H2CNTs

FESEMTEM

TGACNTs

CNTs

CNTsCNTs

(IEC)CNTs

HICCNTs

CVD-DSCNTs°85060

40150C2H2H2TGA

CNTs95FESEMTEMCNTs

3545CNTsIEC

HICCNTs

HICIEC

HIC50mM Tris-HCl72

CNTs

HICCNTs

CNTs

iv

APPROVAL PAGE

I certify that I have supervised and read this study and that in my opinion, it conforms

to acceptable standards of scholarly presentation and is fully adequate, in scope and

quality, as a thesis for the degree of Master of Science (Biotechnology Engineering).

_________________

Faridah Yusof

Supervisor

_________________

Maan Alkhatib

Co-supervisor

I certify that I have read this study and that in my opinion it conforms to acceptable

standards of scholarly presentation and is fully adequate, in scope and quality, as a

thesis for the degree of Master of Biotechnology Engineering.

___________________

Ibrahim Ali Noorbatcha

Internal Examiner

This dissertation was submitted to the Department of Biotechnology Engineering and

is accepted as a partial fulfilment of the requirements for the degree of Master of

Biotechnology Engineering.

_____________________

Md Zahangir Alam

Head, Department of

Biotechnology Engineering

This dissertation was submitted to the Kulliyyah of Engineering and is accepted as a

partial fulfillment of the requirements for the degree of Master of Biotechnology

Engineering.

______________________

Amir Akramin Shafie

Dean, Kulliyyah of

Engineering

v

DECLARATION

I hereby declare that this dissertation is the result of my own investigations, except

where otherwise stated. I also declare that it has not been previously or concurrently

submitted as a whole for any other degrees at IIUM or other institutions.

Mubarak Mujawar

Signature ____________________ Date _____________________

vi

INTERNATIONAL ISLAMIC UNIVERSITY MALAYSIA

DECLARATION OF COPYRIGHT AND AFFIRMATION

OF FAIR USE OF UNPUBLISHED RESEARCH

Copyright © 2010 by Mubarak Mujawar. All rights reserved.

SYNTHESIS OF CARBON NANOTUBES AND ITS APPLICATION IN

PROTEIN PURIFICATION

No part of this unpublished research may be reproduced, stored in a retrieval system,

or transmitted, in any form or by any means, electronic, mechanical, photocopying,

recording or otherwise without prior written permission of the copyright holder except

as provided below.

1. Any material contained in or derived from this unpublished research may

only be used by others in their writing with due acknowledgement.

2. IIUM or its library will have the right to make and transmit copies (print or

electronic) for institutional and academic purposes.

3. The IIUM library will have the right to make, store in a retrieval system

and supply copies of this unpublished research if requested by other

universities and research libraries.

Affirmed by Mubarak Mujawar.

__________________ __________________

Signature Date

vii

ACKNOWLEDGEMENTS

First of all I would like to raise my hand of syukr (appreciation) to Allah (s.w.t) for

the guidance, wisdom and barakah for all these years til now, where I have reached to

this important destination of my journey in life to accomplish my goal.

I also would like to dedicate my deepest gratitude to my supervisor, Assoc.

Prof. Dr. Faridah Yusof and my co-supervisor, Assist. Prof. Dr. Ma’an Fahmi Al

khatib for their excellent supervision, good guidance and moral support throughout the

duration of this research study. My sincere thanks also go to all the lab technicians of

Biotechnology Engineering Department and Material Engineering Department for

their good cooperation and assistance provided throughout this research study. I also

want to thank my mother and my brothers for their blessings, support and

encouragement.

Last but not the least, my special thanks goes to postgraduate colleague, Br

Emad, Khalid, Mohammad Al Saadi, Salwudin for their kind assistance provided

throughout the period of study during the experimental work as well as dissertation

writing.

viii

TABLE OF CONTENTS

Abstract in English………………………………………………………..............

Abstract in Arabic………………………………………………………………...

Approval Page…………………………………………………………………….

Declaration Page………………………………………………………………….

Copy right Page…………………………………………………………………...

Acknowledgements …………………………………………………………..…..

Table of Content……………………………………………………………….....

List of Tables ……………………………………………………………….........

List of Figures ………………………………………………………………........

List of Abbreviations ……………………………………………………………...

ii

iii

iv

v

vi

vii

viii

xii

xiv

xix

CHAPTER ONE: INTRODUCTION …………………………………………..

1.1 Overview...……………………….………………………….................

1.2 Problem Statement …..………………………………….......................

1.3 Research Objectives…………………………….........….......................

1.4 Research Methodology …………………………………………...........

1.5 Research philosophy…………………………………………………..

1.5 Significance of Study…………………………………………………..

1.6 Scope of Study…………………………………………………………

1.7 Thesis Organization……………………………………………………

CHAPTER TWO: LITERATURE REVIEW ...………………………………...

2.1 Histrory of Carbon nanotubes (CNTs)…………………………………

2.2 Structure of Carbon Nanotubes (CNTs) …………………………….....

2.3 Properties of CNTs………………………….………………………....

2.3.1 Electronic Properties…….…………..………………..................

2.3.2 Mechanical Properties…...……………………….......................

2.3.3 Thermal Conductivity ………...………………………………..

2.3.4 Field Emission ………..………………………………………..

2.4 Productions Methods of CNTs………………………………………….

2.4.1Arc Discharge …….………………………………….................

2.4.2 Laser Ablation……………………………………………….....

2.4.3 Chemical Vapour Deposition……………………………………

2.4.3.1 Advantages and Limitations of CVD……………………

2.4.3.2 Vapor Phase Growth……………………………………

2.4.3.3 CVD Method using Substrate Catalyst………………….

2.4.3.4 Plasma Enhanced Chemical Vapour Deposition

(PE- CVD)............................................................................

2.4.3.5 Fluidized-Bed CVD Method.............................................

2.4.3.6 Double Stage Chemical Vapor Deposition (DS-CVD….

2.4.3.7 Statistical design for production of CNTs…………...

2.5 Comparision of Nanotube Synthesis Methods………………………….

2.6 Factors Influencing the Growth Mechanism of CNTs…………………

2.7 Functionalization of CNTs……………………………………………

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47

49

51

52

53

ix

2.7.1 Covalent Functionalization …………………………………….

2.7.2 Non-covalent Functionalization of CNTs………………………

2.8 Applications of CNTs......………………………………………………

2.8.1 Biological Applications of CNTs……………………………….

2.8.1.1 Drug and Gene Delivery…………………………………

2.8.1.2 CNTs for cancer therapy…………………………………

2.8.1.3 CNTs for HIV/AIDS therapy……………………...…...

2.8.2 Nanotube Sensors………………………………………………

2.8.5.1Carbon Nanotubes as Gas sensor .....................................

2.8.5.2 Carbon Nanotubes Array –Based Biosensor……………

2.8.3 Hydrogen Storage ……………………..………………………

2.8.4 Causes and Effects on Application of CNTs………………….

2.9 Skim Latex………………………………………………......................

2.9.1 Natural Rubber …………….…………………………………...

2.9.2 Types of Protein in Skim Latex………………………………...

2.9.3 CNTs as the Filter for Protein Separation ……………………...

2.9.4 Advantage of CNTs Filter……………………………………....

2.10 Protein Purification……………………………………………………

2.11 Column Chromatography …………………………….........................

2.11.1 Ion Exchange Chromatography ………………………………

2.11.2 Hydrophobic Interaction Chromatography……………………

2.12 Summary………………………………………………………………

CHAPTER THREE: MATERIALS & METHODS ……………………….…..

3.1 Materials………………………….…………………………………….

3.2 Characterization………………..…….....................................................

3.3 Methods………………………………………………………………..

3.3.1 Design of Experiment for CNTs Production……………………

3.3.2 Design of Experiment for protein purification …………..……..

3.3.3 The Modified Double Stage Chemical Vapor Deposition

(DS-CVD)…………………………………………………………

3.3.4 Production of MWCNTs………………………………….……

3.3.5 Purification of CNTs…………………………………….........

3.3.6 Functionalization of CNTs…………………..........................

3.3.6.1 Covalent Functionalization by using two step

Carbodiimide Activated Amidation……………........

3.3.6.2 Non Covalent Functionalization of CNTs………………

3.3.7 Purity Measurement of CNTs…………………………………..

3.3.8 Preparation of Skim Latex Serum Protein…………………….

3.3.8.1 Acidification of Skim Latex ……………………………

3.3.8.2 Centrifugation of Skim Latex……………………………

3.3.8.3 Freeze Drying of Skim Latex Serum Protein…………. …

3.3.8.4 Dialyses of Skim Latex Serum Protein …………………

3.3.9 Purification of Skim Latex Proteins…………………………….

3.3.9.1 Protein Purification using Non Functionalized CNTs….

3.3.9.2 Protein Purification using Covalently Functionalized

CNTs……………………………………………………..

3.3.9.3 Protein Purification using Non Covalently

Functionalized CNTs……………………………………

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100

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102

102

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106

x

3.3.9.4 Protein Purification using phenyl sephrose ……………..

3.3.10 Analysis of Proteins……………………………………………

3.3.10.1 Chromatographic Protein Profile of Skim Latex

Serum………………………………………………...

3.3.10.2 Sodium Dodecyl Sulfate-Polyacrylamide Gel

Electrophoresis (SDS-PAGE) ……………………..

3.4 Summary………………………………………………………………..

CHAPTER FOUR: RESULTS AND DISCUSSION …………………………..

4.1 Introduction…………………………………………………………….

4.2 Production of CNTs ………………………………………………........

4.2.1 Statistical Analysis of CNTs………………………………......

4.2.2 Effect of Process Parameters on CNTs yield……………..…...

4.3 Purification of CNTs………………………………………………….

4.3.1 Characterization of CNTs using FESEM……….......................

4.3.2 Characterization of CNTs using TEM…………………….......

4.3.3 Characterization of CNTs using FTIR………….......................

4.3.4 Characterization of CNTs using TGA………………………...

4.4 Purification of Skim Latex Serum Protein…….……………………..

4.4.1 Protein Purification using Non Functionalized CNTs………..

4.4.2 Protein Purification using Functionalized CNTs……………...

4.4.2.1 Protein Purification using Covalently Functionalized

CNTs…………………………………………………...

4.4.2.2 Protein Purification using Non Covalently

Functionalized CNTs…………………………………..

4.4.2.3 The behavior of Covalent and Noncovalent on

Chromatography…………………….…………………

4.4.3 The Effect of pH on Purification Method……………..............

4.4. 4 The Effect of Concentration of Buffer Salts and Neutral salt

on purification method………………………………………..

4.5 Sodium Dodecyl Sulphate Polyacrylamide Gel Electrophoresis

(SDS-PAGE) Analysis of protein …………………………… ……

4.6 Comparison Between the capacity of Non Functionalized CNTs

and Phenyl Sepharose as HIC media……………………………….

4.6.1 Effect of pH on HIC media…………………………………...

4.6.2 Concentration of Buffer CNTs vs phenyl Sephrose………......

4.6.3 Effect of Neutral Salts on HIC media……………………... .

4.7 Summary……………………………………………………………..

CHAPTER FIVE: CONCLUSIONS AND RECOMMENDATIONS ...……

5.1 Conclusions…………………………………………………………...

5.2 Recommendations…………………………………………………….

BIBLIOGRAPHY………….....................................................................………..

PUBLICATIONS………………………………………………………………..

APPENDIX A…………………………………………………………………....

APPENDIX B………………………………………………………………........

APPENDIX C…………………………………………………………………....

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xi

LIST OF TABLES

Table No. Page No.

2.1

2.2

2.3

2.4

2.5

2.6

2.7

2.8

2.9

3.1

3.2

3.3

3.4

3.5

3.6

3.7

Summary of synthesis of CNTs using CVD techniques

Comparison of Arc-Discharge, Laser Ablation and Chemical Vapor

Deposition

Functionalization of CNTs with wide range of molecules

Summary for some of the Hydrogen Storage Reports up to 2001

Typical Fresh Latex Composition (from Rubber Foundation

Information Centre for Natural Rubber)

Differences between proteins and their exploitation for purification

High dynamic binding capacities of ion exchange resins

Two Types of Ion Exchange Resins

Properties of phenyl sephrose Fast Flow

Four Levels Half Factorial Design with real factors values and level

ranges with four factors (A,B,C,D), three replicate, one block and

three center points per block

Two Level Full Factorial Design with real factors values and level

ranges with two factors, two replicate, one block and one center points

per block

Operating Parameters for Protein Purification by Non-Functionalized

CNTs.

Non functionalized CNTs for Protein Purification with Different

buffer, pH and Ionic Strength

Operating Parameters for Protein Purification by Covalently

Functionalized CNTs

Covalently Functionalized CNTs used for Protein Purification with

Different buffer, pH and Ionic Strength

Operating Parameters for Protein Purification by Non-Covalently

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xii

3.8

3.9

3.10

4.1

4.2

4.3

4.4

4.5

4.6

4.7

4.8

Functionalized CNTs

Non -Covalently Functionalized CNTs used for Protein Purification

with Different buffer, pH and Ionic Strength

Quantity (ml) of components for preparing a 12 % separating gel.

Quantity (ml) of components for preparing a 12 % stacking gel

Values of Observed Response for Production of CNTs

TGA Analysis of High Yield CNTs Samples

Analysis of Variance (ANOVA) for Selected Factorial Model for

CNTs yield

Validation Study for Selection of Best yield, high quality and high

purity of CNTs

EDX analysis of CNTs

Purification of protein from skim latex serum

Area under the elution peak for Purification of Protein by HIC media

CNTs

Comparison of area under the elution peak between HIC media CNTs

and phenyl sephrose

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xiii

LIST OF FIGURES

Figure No. Page No.

2.1

2.2

2.3

2.4

2.5

2.6

2.7

World of Carbon Related Materials (www.iljinnanotech.co.kr,

2002).

A graphene sheet made of C atoms placed at the corners of

hexagons forming the lattice with arrows AA and ZZ denoting

the rolling direction of the sheet to make (b) a (5,5) armchair

nanotube and (c) a (10,0)zigzag nanotube(Deepaketal., 2003)

(a) Zig-Zag Single-Walled Nanotube. Note the zig-zag pattern

around circumference and m = 0. (b) Chiral Single-Walled

Nanotube. Note twisting of hexagons around tubule body. (c)

Armchair Single-Walled Nanotube. Note the chair-like pattern

around circumference and n = m (Harris, 2001)Activated Carbon:

Surface and Pores-Scanning Electron Microscope Image

Schematic illustrations of the structures of (A) armchair, (B)

zigzag, and(C) chiral SWNTs. Projections normal to the tube axis

and perspective views along the tube axis are on the top and

bottom, respectively. (D) Tunneling electron microscope image

showing the helical structure of a 1.3- nm-diameter chiral

SWNT. (E) Transmission electron microscope (TEM) image of a

MWNT containing a concentrically nested array of nine SWNTs.

(F) TEM micrograph showing the lateral packing of 1.4-nm-

diameter SWNTs in a bundle. (G) Scanning electron microscope

(SEM) image of an array of MWNTs grown as a nanotube

forest (Ray et al., 2002)

Diagram showing rolling direction of nanotube (Dresselhaus et

al., 1998)

Structures of carbon nanotubes

Different structures of MWCNTs. Top-left: cross-section of a

MWCNT the different walls are obvious, they are separated by

0.34nm. Rotation around the symmetry axis gives us the

MWCNT. Top-right: Symmetrical or non-symmetrical cone

shaped end caps of MWCNTs. Bottom-left: A SWCNT with a

diameter of 1,2nm and a bundle of SWCNTs covered with

amorphous carbon. Bottom-right: A MWCNT with defects. In

point, P a pentagon defects and in point H a heptagon defect

(Ajayany and Ebbesenz, 1997)Structures of carbon nanotubes

(www.iljinnanotech.co.kr , 2002)

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xiv

2.8

2.9

2.10

2.11

2.12

2.13

2.14

2.14

2.15

2.16

2.17

2.18

2.19

Schematic diagram of arc-discharge apparatus

Schematic drawings of a laser ablation apparatus

TEM images of a bundle of SWCNTs catalyzed by Ni/Y (2:0.5

%) mixture, produced with a continuous laser (Thess et al.,

1996)

Schematics drawings of a CVD deposition oven

Schematic diagram of a vapour phase growth apparatus

(www.iljinnanotech.co.kr, 2002)

Schematic diagram of thermal CVD apparatus [w Schematic

diagram of spurting machine (www.angstromsciences.com,

2002 ww.iljinnanotech.co.kr, 2002)

Schematic diagram of Plasma Enhanced CVD apparatus

(www.iljinnanotech.co.kr, 2002)

Schematic diagram of the fluidized-bed reactor (Mauron et al.,

2003)

Common strategies for covalent functionalization of CNTs

via end side (Banerjee et al., 2005)

Common strategies for covalent sidewall functionalization

of CNTs (Banerjee et al, 2005)

Some specific biomedical applications of CNTs beingexplored

by various groups as novel delivery systems (Kam et al., 2006)

Schematic representation of the helical crystallization of proteins

on the outer surface of a carbon nanotube. a) Computed power

spectrum of the Fourier transform of a helical array of

streptavidin molecules. The helical repeat is 12.8 nm and the

arrow indicates 1/2.5 nmÿ1. b) Noise-free view of the helical

repeats obtained by correlation. c) Three-dimensional model of

streptavidin assemblies calculated by retroprojecting the noise-

free helical repeat shown in (b) along the Euler angles deduced

from the analysis of the diffraction pattern. The bar represents 25

nm in (b) and 12.5 nm in (c) (Balavoine et al., 1999)

Schematic diagram of the carbon nanotube array biosensor. The

enzyme immobilization allows for the direct electron transfer from

the enzyme to platinum transducer were obtained with a JEOL-

JSM 840 scanning microscope at 10 KV. Subsequently, enzyme

immobilization was achieved by incubation for 3 h of both freshly

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xv

2.20

2.21

2.22

2.23

2.24

2.26

3.1

3.2

4.1

4.2

4.3

4.4

4.5

4.6

4.7

oxidized sensors in an enzymatic solution (1500 to 2500 U/mL)

SEM images of the Pt-aligned carbon nanotube array (A) in

original state, (B) after being chemically etched with a mixture of

concentrated H2SO4 and HNO3 acids (3:1, 98% and 65% re-

spectively) for 8 h at 40 °C, washed with deionized water and

dried at 100 °C overnight, and (C) after air oxidation at 600 °C for

5 min under air flow. SEM images were obtained with a JEOL-

JSM 840 scanning microscope at 10 KV and Scale Bar is 1 µm

Temperature-dependent behavior of desorption of hydrogen

(Dillon, et al., 2001)

Segment of Natural Rubber polymer chain (smith, 1996)

Working range of anion and cation exchangers

Ion Exchange Chromatography mechanism

Structural formulae of the 8 commonly occurring amino acids that

display hydrophobic characteristics

Flow chart of the overall experiment

Schematic diagram of DS-CVD

Relationship between Predicted and Experimental values of yield

of CNTs

3D Surface Plots: Effect of process parameters on CNTs yield. (a)

interaction plot of yield of CNTs, reaction time and reaction

temperature (b)interaction plot of H2 and reaction temperature,

(c)interaction plot of C2H2 and reaction temperature, (d)

interaction plot of yield of CNTs, flow rates of C2H2 and H2

( a-d) FESEM images of CNTs produced at reaction temperature

850°C, before purification with acid HCl

( a-d) FESEM images of CNTs produced at reaction temperature

850°C, after purification with acid HCl

(a-b) FESEM images of CNTs (wall) produced at reaction

temperature 850°C

( a-b) FESEM images of CNTs produced at reaction temperature

850°C, before functionalization

( a-b) FESEM images of CNTs produced at reaction temperature

850°C, after functionalization

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xvi

4.8

4.9

4.10

4.11

4.12

4.13

4.14

4.15

4.16

4.17

4.18

4.19

4.20

4.21

(a-c)HRTEM images of CNTs produced at reaction temperature

850°C at different magnification TEM image of CNTS at 850 oC

(a-c) HRTEM images CNTs produced at reaction temperature

850°C at different magnification TEM image of CNTS at 850 oC

FTIR Absorption Spectra, a) Functionalized CNTs, b) Non-

functionalized CNTs

EDX analysis of (a) non functionalized CNTs (b) functionalized

CNTs

TGA analysis of CNTs produced at reaction temperature 850°C

TGA analysis of CNTs produced at reaction temperature 600°C

Chromatographic protein profile of skim latex serum on non

functionalized CNTs as media; U-unbound protein, B-bound

protein (run 4)

Chromatographic protein profile skim latex serum on covalently

functionalized CNTs as media; U-unbound protein, B-bound

protein (run 5)

Chromatographic protein profile skim latex serum on non

covalently functionalized CNTs as media; U-unbound protein,

B-bound protein (run 4)

SDS-PAGE for for non functionalized CNTs

Chromatographic protein profile of skim latex serum on non

functionalized CNTs as media at pH7; U-unbound protein, B-

bound protein

Chromatographic protein profile of skim latex serum on HIC using

phenyl sephrose as media at pH7; U-unbound protein, B-bound

protein

Chromatographic protein profile of skim latex serum on HIC using

CNTs as media at pH5; U-unbound protein, B-bound protein

Chromatographic protein profile of skim latex serum on HIC

using phenyl sephrose as media at pH5; U-unbound protein, B-

bound protein

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xvii

LIST OF ABBREVIATIONS

CNTs

SWCNTs

MWCNTs

DS-CVD

FESEM

TEM

FTIR

EDX

AFM

IEC

HIC

OD

OD595mm

kDa

SDS-PAGE

DMTA

NHS

EDAC

Carbon Nanotube

Single walled Carbon nanotube

Multiwalled Carbon Nanotubes

Double Stage chemical vapour deposition

Field Emission Scanning Electron Microscope (SEM)

Transmission Electron Microscope

Fourier Infrared spectroscopy

Electron Dispersive Array

Atomic Force Microscopy

Ion Exchange Chromatography

Hydrophobic Interaction Chromatography

Optical density

Optical Density at 595nm wavelength

kilo Dalton

Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis

Dynamic mechanical thermal analyzer

N-hydroxysuccinimide

N-ethyl-N’-(3-dimethylaminopropyl) carbodiimide

hydrochloride

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CHAPTER ONE

INTRODUCTION

1.1 INTRODUCTION

Research on new materials technology is attracting the attention of researchers all over

the world. Developments are being made to improve the properties of the materials

and to find alternative precursors that can give desirable properties on the materials.

Nanotechnology, which is one of the new technologies, refers to the development of

devices, structures, and systems whose size varies from 1 to 100 nanometers (nm).

The last decade has seen advancement in every side of nanotechnology such as:

nanoparticles and powders, nanolayers and coats, electrical optic and mechanical

nanodevices, and nanostructured biological materials. Nanotechnology is estimated to

be influential in the next 20-30 years, in all fields of science and technology (Harris et

al., 2001).

Great interest has recently been developed in the area of nanostructures carbon

materials. Carbon nanostructure materials are becoming of considerable commercial

importance with interest growing rapidly over the decade or so since the discovery of

buckminsterfullerene, carbon nanotubes, and carbon nanofibers (Dresselhaus et al.,

2001). Carbon nanotubes (CNTs) and carbon nanofibers (CNFs) are among the most

eminent materials in the first rank of revolution nanotechnology. The most eye-

catching features of these structures are their electronic, mechanical, optical and

chemical characteristics, which open a way to future applications. These properties

can even be measured on single nanotubes and nanofiber. For commercial application,

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large quantities of purified carbon nanotubes are needed (Dresselhaus et al., 1998 and

Thomas, 1997).

Fundamental and practical nanotube researches have shown possible

applications in the fields of energy storage, molecular electronics (transistors,

capacitors), nanomechanic devices, and composite materials. The main avenues of

potential applications of carbon nanotubes and carbon nanofibers are: ultimate

reinforcement fibers for composites (high strength, high aspect ratio, high thermal and

chemical stability), conducting nanowire, field emitters (individual nanotube field

emitters and large area flat panel displays); nanotools (tips for Scanning Tunneling,

Atomic Force, Magnetic Resonance Force and Scanning Near Field Optical,

Chemical/Biological Force Microscope tips, nano manipulators, nano tweezers)

(www.xintek.com, 2002 and http ://www.applied-nono-technology.com, 2001).

Skim latex or rubber serum is produced as a by-product during the preparation

of latex concentrate upon centrifugation. It contained a dry rubber content of only 3 to

7 % (Tangboriboonrat et al., 1999) with very low dirt content. Serum is the non rubber

aqueous portion of latex which can be obtained via acid coagulation or membrane

filtration. The serum contains a rich source of nitrogen, carbohydrates, proteins,

enzymes and lipids. Some of these proteins are important enzymes which have great

demand in pharmaceutical, food and detergent industries. Hence, there is a need in the

technology to improve the efficiency and yield of protein separation. Purification

steps will involve the use of column chromatographies, namely the Ion Exchange

Chromatography (IEC) and Hydrophobic Interaction Chromatography (HIC). This

process helps to purify and obtain high efficiency of protein separation from skim

latex, using non functionalized and functionalized CNTs as the chromatographic

media.

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1.2 PROBLEM STATEMENT

Recently, Chemical vapor Deposition (CVD) seems to be the most promising method

for CNTs production.CVD is very different from the other two common methods used

for CNTs production namely; arc discharge and laser ablation (Ebbesen and Ajayan,

1992, Journet et al.,1997 and Thess et al., 1996). At the moment, arc discharge

methods generally produce larger quantities of impure material and produces small

amount of CNTs yield (Journet and Bernier, 1998). Whereas for laser ablation, the

method was said to be uneconomically feasible due to high laser power required and

involves high-purity graphite rods, as well as it produces small amounts of nanotubes

(Kalpana et al., 2005). The material prepared by these techniques has to be purified

using chemical and separation methods (Strong et al., 2003). None of these techniques

are scalable (Lijima, 1991, Guo et al., 1995) to make the industrial quantities needed

for many applications (e.g., in composites), and this has been a bottleneck in nanotube

research and development (R&D).

In recent years, work has focused on developing Chemical Vapor Deposition

(CVD) (Dong et al., 2006) which is one of the most popular method to produce CNTs

using C2H2 and H2 as precursors, while Argon (Ar) acts as parching gas. CVD seems

to be the most promising method for possible industrial scale-up due to the relatively

low growth temperature, high yields and high purities that can be achieved (Thomas,

1997). Chemical Vapor Deposition (CVD) is a very promising process with respect to

large-scale production of different kinds of carbon nanostructures materials as for

example for multi, and single-walled carbon nanotubes.

Latex extraction from the rubber tree, Hevea brasiliensis, can be done by

tapping the tree, and as the latex exudes from the cut, it was further centrifuged to

produce concentrated latex and skim latex as by-products. The concentrated latex

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serves as the main raw material for the further process of product manufacturing while

the skim latex on the other hand is the waste product of rubber industry. The skim

latex is conventionally being treated using oxidation ditch or waste stabilization ponds

before discharging it into the stream. Instead of leaving this abundantly available

skim latex untouched and prolong affecting the environment, it is better to make use

of this useful material. This can maximize the usage of rubber product, minimize

pollution on the environment, and undeniably generate promising revenue to the

rubber growers as well as our country as a whole.

1.3 RESEARCH OBJECTIVES

1. To produce high purity of Carbon Nanotubes (CNTs) by using Double

Stage Chemical Vapor Deposition (DS-CVD).

2. To investigate the effect of production parameters on CNTs production

by varying gase flow rates (C2H2 and H2), reaction temperature and

reaction time by using Design Expert®

Version 6.0.8.

3. To optimize the process parameters in skim latex protein separation by

varying pH and concentration of buffer salt.

4. To compare the separation of protein from skim latex using non-

functionalized CNTs and functionalized CNTs as protein purification

media in column chromatography.

1.4 RESEARCH METHODOLOGY

In this research, carbon nanotube is produced using Double Stage Chemical Vapor

Deposition (DS-CVD). In order to achieve high purity of CNTs, the process

parameters were optimized, such as gas flow rates of H2 and C2H2, reaction time,

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reaction temperature, using Design Expert®

version 6.0.8. The CNTs produced were

purified by using acid washing. Covalent functionalization was carried out using two

step diimide activated amidation process. The process was carried to obtain functional

groups such as amine or carboxylic group on the surface of CNTs. The noncovalent

functionalization was obtained by irreversibly attaching 1-pyrenebutyric acid

succinimidyl ester onto the sidewall of the MWNTs via π-π stacking of the pyrene

group. In column chromatography, selection of chromatographic media namely

functionalized and non functionalized CNTs were essential in order to separate protein

from skim latex serum. The purification of CNTs using the functionalized CNTs

which guided by the functional group such as carboxylic or amine group that exists on

the surface of CNTs was performed by Ion Exchange Chromatography (IEC). Non

functionalized CNTs which contain only carbon on its surface undergo the

Hydrophobic Interactions Chromatography (HIC) which based on the hydrophobic

interaction between the proteins and CNTs matrix.

1.5 RESEARCH PHILOSOPHY

Proteins separation in conjunction with carbon nanotubes is expected to create a

major breakthrough in the coming future. Carbon nonotubes with its supernatural

ability to perform multidisciplinary functions can find niche applications in both the

immobilization of protein and selective removal of proteins. However, synthesis

conditions have major influences on the nature of the carbon nanotube product

formed. Reaction conditions including temperature, gas composition, and the nature

and composition of metallic catalysts leading to the nanotube formation which in turn

affects the properties of the final product have to be still explored to understand these

influences. Moreover, issues regarding the synthesis and purification as well as the

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functionalization and solubilization of carbon nanotubes are relevant topics in this

rapidly growing field.

1.6 SIGNIFICANCE OF STUDY

CNTs are in the limelight globally as a new dream material in the 21st century

and are broadening their applications to almost all the scientific areas, such as

aerospace science, bioengineering, environmental energy, materials industry, medical

and medicine science, electronic computer, security and safety, and science education.

Now they are known to be superior to any other existing material in mechanical,

electrical, and hydrogen storage characteristics.

1. The effect of process parameters such as reaction temperature, reaction

time and gas flow rate of acetylene and hydrogen were essential in order

to produce carbon nanotube.

2. Separation of protein from skim latex serum using CNTs as a

chromatographic media.

3. Functionalize carbon nanotubes (CNTs), to be used as a filter in separating

the proteins from skim latex serum.

4. The research of CNTs functionaliztion has been intensified due to their

potential for biomedical and biotechnological application (Davis et al.,

1998).

5. Material for biomedical application such as fillers in property–enhanced

nanocomposites supports matrix in enzyme immobilization and

chromatographic media in protein purification.

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1.7 SCOPE OF RESEARCH

In this research, Double Stage Chemical Vapor Deposition (DS-CVD) was used to

produce a high purity of CNTs. DS-CVD was chosen because it can divide the

growing process of MWCNT or SWNT into a nucleation stage and a growth stage.

Nucleation stage is at the beginning of MWCNT or SWNT growth and in very short

time, in which the catalyst particles get ready to catalyze the growth of MWCNTs or

SWNTs and short nanotubes nucleated on the nanoparticles. In the following growth

stage, the nanotubes grow longer within certain period of time. These produced CNTs

were used in separation of protein from skim latex. This invention was a novel study

to use three types of CNTs namely non functionalized, covalent and non covalent

functionalized, as a column chromatographic media for skim latex protein separation.

The CNTs produced were characterized by using Field Emission Scanning Electron

Microscopy (FESEM), Transmission Electron Microscopy (TEM),

Thermogravimetric Analysis (TGA) and Fourier Transform Infrared Spectroscopy

(FTIR). The separation of protein from skim latex serum, the process conditions such

as pH and concentration of buffer salt will be invistigated

1.8 THESIS ORGANIZATION

Chapter one an introduction/background of the research works. Chapter two provides

a review of literature concerning the various methods of production of CNTs,

applications of CNTs and skim latex serum which contains different types of protein.

Chapter three covers the methodology of the research. Chapter four provides and

discusses the findings obtained from the research work. Chapter five is the conclusion

coupled with some recommendations on how to improve the research.