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1 Branching and Self-Organization in Marine Modular Colonial Organisms: An Ecological Approach. Juan A. Sánchez (1), Howard R. Lasker (1), J. Dario Sánchez (2) and Michael J. Woldenberg (3). (1) Department of Biological Sciences, 109 Cooke Hall, University at Buffalo (The State University of New York), Buffalo, NY 14260, USA. [email protected]; [email protected] phone: 716-645-2881; fax: 717-645-2975 (2) Departamento de Matematicas, Universidad Nacional de Colombia, Bogotá, Colombia. [email protected] phone 011-571-2692265; fax 011-571-2697853 (3) Department of Geography, University at Buffalo, (The State University of New York), NY 14260, USA. (716) 645-2722 x29 [email protected] Key words: branching, modular organisms, self-organization, gorgonian coral, colony development, branch interference. Running head: Branching in modular organisms.

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Branching and Self-Organization in Marine Modular Colonial Organisms:

An Ecological Approach.

Juan A. Sánchez (1), Howard R. Lasker (1), J. Dario Sánchez (2) and Michael J. Woldenberg (3).

(1) Department of Biological Sciences, 109 Cooke Hall, University at Buffalo (The State

University of New York), Buffalo, NY 14260, USA. [email protected]; [email protected]

phone: 716-645-2881; fax: 717-645-2975

(2) Departamento de Matematicas, Universidad Nacional de Colombia,

Bogotá, Colombia. [email protected]

phone 011-571-2692265; fax 011-571-2697853

(3) Department of Geography, University at Buffalo,

(The State University of New York), NY 14260, USA.

(716) 645-2722 x29

[email protected]

Key words: branching, modular organisms, self-organization, gorgonian coral, colony

development, branch interference.

Running head: Branching in modular organisms.

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Abstract

Regardless of the relevance and universality of branching pattern in modular colonial

organisms, there is no clear explanation about its development nor what makes these organisms

to preserve shape during growth. Modular organisms such as gorgonian corals branch sub-

apically and depicting hierarchical mother-daughter relationships among branches. Mother

branch size frequency distribution followed a scaling power-law dependence suggesting self-

organized criticality. Shape is preserved in these tree-like networks by maintaining a constant

ratio between total branches and mother branches (c). It is assumed that c, an integer in terms of

number of branches, is dynamically maintained by the production of mother branches (from an

old daughter branch) when the number of total branches is off the neighborhood of c. Using that

simple rule, we modeled both the intrinsic process of branching along with the global-ecological

effects by adapting a discrete logistic equation. It exhibited a very predictable trajectory ending

without fixed points or stable equilibrium, converging to a fixed number of branches. The

branching trajectory was sigmoid with a rapid exponential phase that ended in a short asymptotic

period, which has been observed by a number of empirical studies on hydroids and octocorals.

Different colony architectures may have very different qualitative behaviors depending on the

relationship between branching (r) and c. The inclusion of another parameter accounting for

branch interference and allometry, had endorsement from size and resource capture constraints.

The complex and dynamic nature of branching is still modulated criticality by the interaction

between r and c but global ecological constraints prevail throughout colony development.

Introduction

The study or branching and tree-like networks concerns a great number of disciplines as

well as both physical and biological systems. Branching networks are present from the tiniest

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vessels in the human body or insect wing to the continental size of the Amazon or Mississippi

basins. Many marine modular colonial organisms, such as sponges, corals and hydroids among

others, are also branching structures themselves (i.e. Waller and Steingraeber, 1985). The great

importance of the study of branching for these organisms is that their main interaction with the

environment is through branching. Life-history and fitness in sessile modular organisms are

related to the colony shape and size (i.e. Hughes, 1983; Hughes et al., 1992). Despite the

relevance and universality of the problem of branching, there is no clear explanation about how

is branching dynamically achieved during development nor what makes these organisms to

preserve form or to stop growing (see reviews in Buss, 2001 and Lasker and Sánchez, 2002).

Some of them are indeed classified as having indeterminate growth (i.e. plastic attenuating

growth: Sebens, 1987). This study, based on empirical observations, aims to explain the limits of

branching in modular colonial organisms according to a few parameters that interact dynamically

and how this system self-organizes to preserve shape throughout development.

Although being among the most primitive and basal metazoans, modular colonial

organisms such as cnidarians contain complex developmental machinery such as homeotic genes

(i.e. Finnerty and Martindale, 1997). Genes, such as Cnox-2 for instance, seem to be iteratively

expressed throughout development of hydroid colonies, providing a simple basis for an intrinsic

mechanism of growth but no clear distinction for producing a new branch or extending an old

one has been found (Cartwright et al., 1999; Cartwright and Buss, 2000; Cartwright, pers. com.).

Colonial growth seems to be partially controlled and shaped by environmental stimuli (Buss,

2001). Branching in these organisms, consequently, is not just a developmental matter but an

ecological process too. Computer models demonstrate that with a few rules and environmental

input is possible to mimic colony growth of modular colonial organisms with remarkable realism

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(see review in Kaandorp and Klueber, 2001). It is therefore reasonable to think that branching in

a modular colonial organism be a combination of both internal and external factors that shape

dynamically the system like in any other ecological process (e.g. logistic population growth,

host-parasite, predator-prey interactions, etc.). A challenging goal for a model of branching in

modular organisms is to include the interplay between an intrinsic growth process and global

ecological effects.

The study of branching networks, in contrast, has usually involved the study of ordering,

which depicts hierarchical relationships among branches as different orders. Branching in non-

colonial systems and rivers has had considerable theoretical attention. Ordering systems are

classified into two groups: centrifugal and centripetal. Centrifugal, is when orders increase in the

same direction as a growing tree. Keill (1613-1719) developed elaborated centrifugal scaling

laws based on measurements of casts of the arterial system assuming dichotomous branching of

the arteries (Woldenberg, 1997). Although centrifugal approaches were very realistic on the

hierarchy of branches and nodes, it was replaced almost completely by centripetal schemes.

Horton (1945) proposes a centripetal ordering scheme assigning orders from the periphery

towards the trunk, where unbranched tributaries are assigned order one and excessive side

branches have to be ignored or treat like a constant. When two branches of order one meet, they

create a branch of order two and so on. Strahler’s (1952) modification of Horton’s method is the

most widely used ordering system in the study of river and biological tree-like networks. Both

systems are well suited to creating empirical geometric series or number of branches, mean

branch length, mean basin area, etc. for asymmetrical trees. A similar centripetal system allows

more orders than Strahler or Horton systems and the geometric series are not as generalized

(Horsfield, 1981). In spite of the dominance of the Strahler order systems for rivers and

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biological systems (i.e. Woldenberg et al., 1993), there is some discontent with the fact that the

Horton-Strahler ordering system does not change when lower order branches join the higher

order branch.

These generational systems are well suited for modeling the growth of symmetrically

bifurcating networks. Unfortunately, few, if any of these systems occur in nature (but see review

in Kaandorp and Klueber, 2001). Instead, naturally occurring trees have asymmetrical branching.

Another major problem of Horton-Strahler ordering has been excessive side branching found in

nature (e.g. pinnate branching networks: Fig. 1). Tokunaga (1978) proposed an elegant way to

assign order to asymmetrical trees with many side branches. Using this modification of the

Horton-Strahler ordering systems, statistical symmetry has been recently found between

geological and geophysical branching patterns (Turcotte and Newman, 1996) as well as between

living and non-living systems (Pelletier and Turcotte, 2000; Kaandorp and Klueber, 2001). Some

modular colonial organisms such as gorgonian coral trees have been analyzed using the

traditional Horton-Strahler ordering (Brazeau and Lasker, 1988; Mitchell et al., 1993) whereas

some other could not due to excessive side branching (Sanchez et al., submitted). Using the

Tokunaga ordering scheme, a common feature of rivers and leaves’ networks was the nearly

perfect linearity in the number of branches (N) per order (i) when using semi-log scale (Pelletier

and Turcotte, 2000), N ∝10 αi, where α ≈ -0.65. The mean branch length (L) in terms of order in

rivers and leaves is also a linear function using semi-log scale, L ∝10βi, where β ≈ 0.34.

However, other modular organisms such as gorgonian corals do not exactly follow the same

pattern. For the “simple” pseudo-dichotomous species (e.g. candelabrums Fig. 2 B) there was not

apparent change among or within orders in the semi-logarithmic plot, which suggests that all

orders have approximately the same branching properties (e.g. growth rates). On the other hand,

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“complex” pinnate species (e.g. feathers Fig. 1) exhibit a great deal of within- and among-order

variation that could be due to the differential growth rates observed between main and side

branches (i.e. Lasker et al., in prep.). Nevertheless, L(i) for corals was very different from which

was found in rivers and leaves (L ∝10βi). Therefore, the behavior of number of branches and

mean branch length per order are not universally similar in all branching patterns of modular

organisms such as gorgonian corals (see Sanchez et al., submitted). This could be due to the

different nature of the marine animal networks or simply because they do not really bifurcate

during branching, which seems to be the case at least for gorgonian corals.

In this paper, we provide new theoretical ground on the ordering and dynamical behavior

of branching and colony development. We aimed to explain the problem of branching with self-

organization and ecological grounds. Particular goals of the study were (1) to examine the

branching and ordering process in modular organisms using gorgonian corals as model system,

(2) to identify critic parameters for the branching dynamics and (3) to propose a model

explaining such dynamics. Particularly for such model we deduced analytically an expression

combining a difference logistic equation (i.e. May, 1976; Case, 2000) with the process of

branching and ordering observed empirically. Finally, the convergence of the discrete succession

of branching was examined to see if the model provides an explanation for determinate growth

and when/how a colony stops branching. This model does not aim to explain both mechanistic

and external controls on branching but to help understanding the numerical behavior of

branching as a discrete process. We wanted to show that although the internal controls face the

changing environment of the colony forming a dynamic ecological interaction colony form is

preserve until the end of development.

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Colonial growth in marine modular invertebrates

Multiple observations on colony growth/development from several marine modular

organisms have a common feature: growth decreases with size/age. For instance, complete

observations on the colony growth kinetics of the branching hydroid Campanularia flexuosa

have shown that there is a decline in growth as size increases (Stebbing, 1981). It is worth noting

that those hydroid colonies after stopping growth keep desorbing hydrants without becoming

senescent. Even more interesting is the numerical behavior of the growth rate of C. flexuosa

though time, which exhibited cyclic non-linear behavior always decreasing after a high peak (i.e.

Stebbing, 1981, Figs. 11-12). Colony growth in gorgonian corals, our model system, has also

been documented to stop/decrease in a determinate fashion when the colonies are reaching

certain size. For instance, growth of the Pacific gorgonian coral Muricea californica decreases as

function of height (Grigg, 1974). Sea whip gorgonians Leptogorgia spp. from the Gulf of

Mexico also exhibit reduction of growth rate with height (Mitchell et al., 1993). Colonies of the

Mediterranean gorgonian coral Paramuricea clavata exhibit also size-specific negative growth

(Coma et al., 1998). Similarly, Lasker et al. (in prep.) showed in an extensive survey of the

Caribbean gorgonian Pseudopterogorgia elisabethae how colonies decrease and finally stop

growing near certain size. Growth from the Mediterranean sea-fan Eunicella clavolinii adjusts to

sigmoid growth models (Velimirov, 1875). Other octocoral such as the deep-sea soft octocoral

Anthomastus ritteri presents a sigmoid Gompertz growth trajectory ending asymptotically at the

biggest/oldest colonies (Cordes et al., 2001). Consequently, it is reasonable to think that if

colonies are decreasing growth when reaching certain size, there could be such a fixed number

indicating the maximum capacity of branches before complete interference. These observations

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also suggested a sigmoid- or logistic-like growth trajectory, which must be met by the

predictions of a realistic model of branching.

Branching in modular organisms: a self-organized process

Modular colonial organisms such as gorgonian corals branch sub-apically and depicting

hierarchical mother-daughter relationships among branches, which could be observed on young

colonies of Pseudopterogorgia bipinnata (Fig. 1 A-B; see also Lasker and Sánchez, in press).

This pattern also occurs among species with sub-apical growth (production of branches below

the apex), which are the case for most branching cnidarians as well as most plants (see review in

Prusinkiewicz, 1998) and fungi (i.e. Watters et al., 2000). Mother branches resemble a pine

branch with many pinnules and are self-similar (e.g. first mother main stem, secondary mother

branch, tertiary mother branch, etc.). Daughter branches, the pinnules, have determinate growth

in short periods of time (Lasker et al., in prep.). The pattern defining the mother-daughter

ordering scheme is far from having fixed branching ratios. It has indeed a parabolic-like behavior

in terms of branches per order and a logistic- or sigmoid-like appearance when accumulating the

number of branches per order. However, any of the colonies follow the same developmental

trajectory and it is reasonable to think that there is no such deterministic rule as the case of

centripetal of centrifugal ordering and bifurcation schemes. Hundreds of colonies of the

gorgonian coral Pseudopterogorgia elisabethae were examined during two years showing that

any daughter branch can turn in a mother branch but its exact location under natural conditions is

uncertain (unpublished). Similarly, every colony branch distribution (e.g. locations of mother

branches, number of daughter branches, etc.) has its unique identity like a fingerprint but they

preserve similar species-specific form. These observations suggested us to think a different

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direction to understand branching. This system seems to grow in a more autonomous and

individualistic way.

Branching on modular organisms seems to be critically controlled by a parameter

indicating the ratio between total branches (N) and mother branches (S) or SN

c = (Fig. 2).

Colonies from two different gorgonian species (Gorgoniidae: Pseudopterogorgia bipinnata;

Plexauridae: Plexaura flexuosa) maintain a linear relationship between total branches and mother

braches, which slope is c (Fig. 2). Shape is preserved in these tree-like networks by maintaining

a constant ratio between total branches and mother branches (c). It is assumed that c, an integer

in terms of number of branches, is dynamically maintained by the production of mother branches

(from an old daughter branch) when the number of total branches is off the neighborhood of c. It

means that every time mother branches are producing daughter branches they are moving the

system off c, which eventually reaches c again after new growth fronts (e.g. mother branches) are

produced and so on. It is assumed that c is related to a branching threshold or an intrinsic

mechanism of branching, which is species- or colony form-specific.

To explain the branching process dynamically let us describe branching as a discrete

recurrent process. Dynamical models may not always be transmitted in terms of differential

equations for those which variables change discretely (Case, 2000). Studying slow-growing

modular organisms such as Pseudopterogorgia spp., there is no way to calculate an

instantaneous growth rate. This, indeed, should be calculated from discrete periods of time (i.e.

Goh and Chou, 1995; Coma et al., 1998; Lasker and Sánchez, in press). Finite discrete equations

also show the iterative nature of colony development where the growing variables are a function

of the previous conditions or X t+1 = f (X t) (i.e. Kaandorp, 1994). Therefore, let us consider a

population of branches N (daughter and mother branches) integrated as a colony from a

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primordial mother branch S0=1. Under initial conditions, the number of branches per mother

branch increases r daughter branches after every iteration from t to t + 1 (branching rate). As the

number of daughter branches increases from iterations of t to t + 1, it reaches eventually c

branches (or is close to), that provokes the production of mother branches from an old daughter

branch. It indeed produces “grandchildren branches” respect to S0 and so on (Fig. 1 A-B).

Therefore the further production of mother branches or growth “avalanches” has this recurrence

form:

crS

SS ttt +=+1 or,

+=+ c

rSS tt 11 (1).

Expression (1) describes the process of branching producing self-similar mother branches

in a self-organized process. For instance, a hypothetical species with r = 12 and c = 20 produced

109 mother branches after 11 iterations and their size frequency distribution (assuming an

increment of r daughter branches per mother branch after every iteration) follows a power law

(Fig. 3 C). If branching is leaded by a critical state the size frequency distribution of branching

fronts size (daughter branches mother branch -1, D) must be dependant of a scaling power law of

the form D(n) ~ n -τ, where n is the frequency of D(n) daughter branches per mother branch and

-τ is a fractal exponent. Interestingly, if we compare the mother branch size frequency

distribution of different colonies from Pseudopterogorgia bipinnata and Plexaura flexuosa, it is

observed a very similar pattern as the observed iterating expression (1) and only noting

qualitative differences between species due to different fractal scaling powers (-1.6 and -2.4: Fig.

3 A and B). Consequently, there is an exponential decrease in branch size (or number of daughter

branches mother branch -1) as their frequency in the branching system increases.

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These theoretical and empirical observations suggest the great importance of parameters

such as c for branching preserving shape. An idea to explain this finding is the behavior of some

dynamic systems that evolve spontaneously from apparently stationary stages without tuning of

parameters (self-organized criticality, see review in Bak, 1996). Such system evolution around a

parameter is due to the critical effect of such parameter as variables increase such as the case of

the slope in the sand pile/avalanche model (i.e. Carlson and Swindle, 1995). Branching and

colony development can be reduced as the production of new and overlapping growth fronts of

mother branches. Branching can be considered as a self-organized criticality phenomenon

oscillating as c is being approached/retreated. Since branching continues as well as the effect of c

in the process, these “avalanches” of mother branches will be more frequent and the colony will

keep branching at many mother-daughter hierarchies simultaneously like in a self-organized

criticality (e.g. Fig. 1 C). Besides to be an actual phenomenon, this process explains satisfactorily

empirical observations on branching for gorgonian corals and the c parameter reveals a

morphospace when compared with module size for the different colony architectures of 24

Caribbean octocoral species (Sanchez et al., in prep.). However, this “intrinsic” branching

mechanism does not seem to explain when this process should end. Expression (1) predicts an

exponential production of branches (Fig. 2 D), which is not observed empirically. The rapid

growth by means of new growth fronts of mother branches brings along both allometric and

branch interference constraints that could influence to resource capture and growth rates.

Consequently, it is reasonable to think that there is an independent effect from the “intrinsic

branching” process that prevents colonies to grow exponentially. The following model aims to

settle both the intrinsic process of branching with the global-ecological effects.

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An ecological approach

This model shapes the intrinsic mechanism that produces and links mother and daughter

branches in a colony explained above (1) by including global ecological effects. The model

predicts a reduction of branching as the number of mother branches reaches a maximum number

or charge capacity (k). As we have seen previously, the two variables (mother and daughter

branches) are phenomena well distinguished during the growth of branching colonies. Although

there is a centrifugal ordering involved in the process of colony development, this model predicts

the production of branches only with the information of mother-daughter branch ratio, which is

independent of ordering. However, the exponential increment for the number of mother branches

observed in (1) does not count for crowdedness effects or the density-dependant/allometric

constraints for the rapidly increasing colony size (e.g. Fig. 3 D). Counting for likely branch

density-dependant constraints, a maximum number of mother branches due to branch

interference, or k, could shape dynamically branching in a logistic-like form. Here, it is assumed

that the natural biggest colonies of a population exhibiting low (or asymptotic) branching are in

the neighborhood of such number. Now the aim is to portray branching in a logistic-like dynamic

process but still dependant of mother branch production (as empirically observed). Under such

circumstances we can modify a population discrete logistic equation like this (2):

−+=+ k

SrSNN t

ttt 11 (2).

Where N is the total number of branches in a colony (both daughter and mother) and S is the

number of mother branches. Even though expression (2) includes the intrinsic branching rate r it

does not show how the branching process occurs. Therefore, the model is a system that needs the

recurrence expressions (1) and (2) to fully depict the dynamic interaction of branching.

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Results

According to the results from integrating expression (1) as shown in the Appendix A, we

have expression (3) for any value of t giving only the initial conditions S0.

t

t crSS

+= 10 (3).

This expression is also needed in order to find the analytic solution for all N t+1, our variable of

interest, in terms of St, the leading variable that behaves according to a mother-daughter

relationship. Now we can replace (3) to reduce (1) to initial conditions (4):

+

++=+ k

crS

crrSNN

t

t

tt

111

0

01 (4).

Following the analytic solution for Nt according to initial conditions S0 (expressions 5-10,

Appendix B). Then we have production of branches Nt+1 in terms of parameters and initial

conditions (10):

+−

+−

−−

+−

+= 2

2

00

0

11

1111

crcr

S

cr

cr

kk

rSNN

tt

t (10).

There is also a special case when 1=cr , or r = c and we can quite reduce the expression (11):

( ) ( )

−−−+= tt

t kS

krS

NN 21213

2000 (11).

Our empirical observations showed us that all tree-like modular organisms such as gorgonian

corals start always with one single source branch (S0 = 1), which is the only branch too at initial

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conditions (N0 = 1). Then we can have the model only in terms of parameters after the first

iteration N1 (12):

+−

+−

−−

+−

+= 2

2

1

11

11111

crcr

cr

cr

kkrN ,

−−

+−

+= 111

11

cr

cr

kkrN or,

krrN −+= 11 (12).

This shows that only after the second iteration the organism start having daughter branches or

“branching” as the reason of the discrete branching rate r with a minor effect of the charge

capacity, because there is only one mother branch and low interference is expected. After the

second iteration the branching increases in a more complex way under the full scope of

parameters, when it is presumably reaching the neighborhood of c (13).

+−

+−

−−

+−

+= 2

42

12

11

1111

crcr

cr

cr

kkrNN (13).

Fixed point, convergence, and qualitative behaviors. If expression (10) is the solution

for a system describing the quantitative behavior of branches during colony development, it is

expected a predictable outcome per species because it is a process to build a discrete structure

instead of a continuous stabilizing population. Therefore, the process should have a very stable

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trajectory before to reach a fixed point otherwise should converge to a common numerical

neighborhood for each colony (or species) sharing the same branching parameters. Initially, if we

want to know a fixed point for Nt we should get:

*lim NNt

t =∞→

,

as:

−−

−−

−+= t

tt

t S

cr

kk

rSNN

ααα

111 2

00

0 ,

wherecr

+= 1α . Therefore, the ∞→n

tNlim exists only if

021111101lim0lim <<−⇔<+<−⇔<+⇔=

+⇔=

∞→∞→ cr

cr

cr

cr t

t

t

tα .

However, r and c are by definition positive parameters (number of branches). Therefore, r > 0

and c > 0, then cr will never be lower than 0 and Nt does not have a fixed point. If there is not

fixed point for a branching colony, then, what is the fate of this dynamic system? We can study

the convergence of the iterative system from a different approach. For instance, since there is

proportionality between the variables (mother and total branches) or c (14):

cN

S tt = (14).

This expression could be also used to examine the convergence for all N through time. For

instance, if we substitute (14) in (1), we obtain (15):

2

2

1 1kc

rNcrNN t

tt −

+=+ (15).

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Let us suppose initially that the succession is convergent and then there is the LNtn=

∞→lim . Thus,

taking the limit at both sides of (15):

221 lim1limlim tttttt

Nkcr

crNN

∞→∞→+∞→−

+= .

However, with { } Ν∈+ ttN 1 it is a sub-succession of{ } Ν∈ttN , then,

LNN tttt==

∞→+∞→limlim 1 , and, 22lim LNtt

=∞→

.

Hence, we can calculate the value of L in the expression (16):

221 L

kcr

crLL −

+= (16).

Since N0 ≠ 0, then L ≠ 0 and we can simplify (16) obtaining:

kcLcr

kcL

crL

kcr

cr

=⇔=⋅⇔−+= 211

This is the case where the succession { } Ν∈ttN is convergent to L = kc and we have two

possibilities (see appendix C for convergence criterion):

I) If 2

2

1 1kc

rNcrNN t

tt −

+=+ > Nt in some interval (e.g. when the curve

221 1 ttt N

kcr

crNN −

+=+ is over the straight line Nt = Nt + 1) then the succession

{ } Ν∈ttN increases as long as its values remain in that interval.

II) If 2

2

1 1kc

rNcrNN t

tt −

+=+ < Nt in an interval (e.g. when the curve

221 1 ttt N

kcr

crNN −

+=+ in under the straight line Nt = Nt + 1) then the succession

{ } Ν∈ttN decreases as longs as its values remain on that interval.

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The convergence can also be corroborated by using the quantitative solution of

expression (10) and hypothetical values of parameters. Overall there is initially a steady

increment in the number of new branches Nt produced between discrete periods of time that

turned abruptly after reaching maximum production per period of time (Fig. 4 A). The turning

point was usually above the line Nt = Nt + 1 but it crosses the trajectory at the turning point when

the value or r was much smaller than c (Fig. 4 A). The cumulative number of branches time

series, indicator of colony size, had a sigmoid trajectory with a short period of low growth

followed by exponential increment and ending after a short asymptotic period (Fig. 4 B).

Hypothetical species also showed how the interplay between parameters r and c resulted

in modified qualitative behaviors of the branching trajectory (Fig. 4). There are two main

qualitative behaviors. One is when r << c corresponding to feather-like pinnate colonies such as

Pseudopterogorgia bipinnata, which branches produce many daughter branches before than one

of these start producing grandchildren branches (Fig. 5 A). The other outcome was those species

with very similar values for r and c, where almost every branch will for sure have daughter

branches (Fig. 5 B). These are pseudo-dichotomous or candelabrum-like colonies, such as

Plexaura flexuosa, that present many overlapping generations of mother branches. The model

has a simplified version due to r ≅ c (expression 11: Fig. 3 B). Even though the fate of branching

seemed very deterministic, Rekin diagrams of these two outcomes show how the pinnate

colonies might keep growing in a cycle of period 10 around the turning point (Fig. 5 A). The

absence of a fixed point at the intercept with the line Nt = Nt + 1 suggest that this is a very unlikely

event but qualitatively possible. Nonetheless, it is clear that the case of pseudo-dichotomous

colonies is more predictable than pinnate ones because the values of Nt + 1 under the turning point

are still in the neighborhood of the maximum branch production in the latter (Fig. 5 A). This

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kind of behavior might be also observed if external perturbation affects the critical parameter c

(e.g. grazing, disturbance, etc.).

Discussion

Branching in modular colonial organisms can be understood as self-organized process

that produces fast pulses of branching. This process is shaped by the changing environment of

the growing colony (e.g. branch interference and global colony size). Like in many ecological

systems, branching may have size- and density-dependant constraints explaining reduction of

growth. Colonial growth, though shaped logistically, converges very predictably to their

expected maximum number of branches, when branching stops completely by its own branch

interference. It was theoretically demonstrated that there is no fixed point during the process of

branching and that the recurrence succession converges to kc, which is nothing but the maximum

number of total branches. Consequently, the branching of modular colonial organisms under the

scheme exposed above follow a very predictable outcome. This is a dramatic difference with a

logistic population model where there may be stable points and/or periodic cycles and the

population perishes (i.e. May, 1976). The branching trajectory was sigmoid with a rapid

exponential phase that ended in a short asymptotic period. The new branches produced during

each discrete period of time was nearly symmetric above and below the line Nt = Nt + 1 indicating

a half-life turning point where growth starts to decrease. Nonetheless, the different colony

architectures may have very different qualitative behaviors depending on the relationship

between growth and production of new growth fronts as new mother branches. The model

predictions adjusted to what were observed by several studies on growth of marine modular

invertebrates, which were logistic- or sigmoid-like growth trajectories.

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Branching and self-organized criticality. The model presented here showed a process

where a simple modular system can drive itself without the need of fine tuning of any parameter.

This self-organized process allowed to branch through time preserving colony shape. Although

this kind of behavior has been identified mostly on physical systems (e.g. sandpiles, avalanches,

forest fire, etc.), there is an increasing number of applications for biological systems including

branching process. Self-organized criticality (SOC) has been found in the “avalanches” of alveoli

activation during lung inflammation, which is a self-similar branching structure (see review in

Csahok, 2000). Branched polymer growth has been explained by a SOC state of a regulating rule

for the aggregation of monomers (Andrade et al., 1997). Even the punctuated equilibrium

evolution model, leading to evolutionary branching, can be explained as a SOC phenomenon

(see review in Bak and Paczuski, 1995). It was surprised to find that a model as SOC explains

more adequately the dynamic process of branching in modular colonial organisms than

traditional approaches such as ordering.

Here was exposed by the first time how the form and development of branching modular

organisms can be partially explained by SOC. It was clear how the scaling of mother branches

size (both empirical and theoretical) followed power law frequency dependence. It was identified

a critical parameter (c) that keeps the system in a spontaneous dynamics whereas preserving

form. Should mother branches produce more daughter branches, or, daughter branches produce

more mother branches? This is the critical state that keeps the colony actively growing. But,

what biological mechanism could provide such self-organized state? Buss (2001) model of

hydroid colony growth by intussusceptions is conceptually a SOC, where colonies keep adding

modules responding to certain threshold of internal fluid tension. A similar approach has been

proposed using redox control for the same kind of hydroids (Blackstone, 1999), which also

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suggest the presence of thresholds triggering colonial expansion. Although we do not know the

interplay between resource transport and developmental genes expression in gorgonian corals,

the critical state c in a colony could indicate certain differential between resource availability and

surplus that could trigger new growth fronts. It is, as a result, testable to find a physiological or

proteonomical correspondence to the pulses of growth observed in gorgonian corals.

Crowdedness and branch interference. Size increment brings along a series of

constraints that affect the colony design and module interference (see review in Lasker and

Sánchez, in press). Space is the primary limiting constraint for clonal sessile taxa (Jackson,

1977). For instance, the design of branching colonies of modular organisms such as cheilostome

bryozoans have been shaped both to prevent dragging and breakage, and, to minimize

crowdedness and module interference (Cheetham and Thomsen, 1981; Cheetham, 1986). During

the growth of byozoans, branches initially divergence and progressively converge beginning to

interfere with their functions, which seems to limit the maximum colony size (Cheetham and

Hayek, 1983). Stebbing (1981) suggested that Campanularia flexuosa stops growing when the

spaces for asexual production of zooids are completely filled or in close proximity to other

zooids. In gorgonian corals, for instance, experimental evidence shows that crowding among

branches impedes the capture of resources at the shaded branches (self-shading: Kim and Lasker,

1997). There are indeed allometric constraints for resource capture during modular growth

because internal modules begin to be resource-depleted by the expansion of new exterior

modules (Kim and Lasker, 1998). Some octocoral colonies (soft coral Sarcophyton) start

growing and calcifying from the base up to the branches (Tentori E., Central Queensland Univ.,

personal communication). Both soft and gorgonian corals have direct connections from every

module down to the colony base (Bayer, 1961). In the case of gorgonian corals it can be

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plausible that the growth and extension of their internal axial channels (solenia) be linked to the

production of new branches (unpublished). If resources are being depleted as the colony

“colonizes” its periphery, there should be such maximum extension point (e.g. k) when no

surplus is then provided to the base and growth and branching would stop.

The inclusion of a new parameter controlling branching in modular organisms such as k,

or maximum branch capacity, had supports from size and interference constraints, which are

evident phenomena during colony growth. The complex nature of branching is still modulated

criticality by the interaction between r and c but global ecological constraints prevail throughout

colony development. Nevertheless, direct empirical observations to fulfill a complete ecological

theory of branching are needed. Some biological other aspects of modular colonial organisms

such as reproduction and regeneration were not cover in this model and could have and

important effect on branching. Straightforward parameters have been identified and a number of

model organisms seem appropriate for such tests. Future observations on colony growth could

greatly increase the knowledge in this field by including branching parameters instead of

height/width or other indirect measurements of modularity.

Acknowledgments

J. A. Sánchez acknowledges Fulbright-Laspau-COLCIENCIAS for a doctoral scholarship

and great support during 1998-2002. The Complex Systems Summer School at the Central

European University, Budapest, Hungary, the Santa Fe Institute (New Mexico, USA), G. Yan

(University at Buffalo, SUNY), and A. Cheetham (Smithsonian Institution) gave to J.A. S. new

insights and good discussion in the studying of branching. The National Center for Ecological

Analysis and Synthesis (NCEAS), University of California, Santa Barbara, workshop “Modeling

of growth and form in sessile marine organisms” 1999 (J. Kaandorp and J.E. Kubler) provided

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great feedback and discussions. The Bahamas Field Station (1999-2000), Gerace Research

Center-College of the Bahamas, San Salvador, Bahamas, provided field facilities for observing

gorgonian corals. Comments and discussions from C. Mitchell, D. J. Taylor, S.D. Cairns, M.A.

Coffroth and G. Yan (University at Buffalo, SUNY) greatly helped during early stages of the

study.

APENDIX A

Mother branches Sn for all t giving only initial conditions S0.

+=+ c

rSS tt 11 (2).

If we keep iterating equation (2) by discrete periods back in time to get the initial conditions S0

we got:

+= − c

rSS tt 11

+= −− c

rSS tt 121

+=

crSS 112

+=

crSS 101 .

And by multiplying them member to member,

1

01211211 1......+

−−−+

+=

t

tttttt crSSSSSSSSSS .

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We have a simplified form of (2) for all S given the initial conditions S0 iterated t+1 or t times

(3):

1

01 1+

+

+=

t

t crSS or,

t

t crSS

+= 10 (3).

APPENDIX B

Analytical solution for Nt according to initial conditions N0 and S0.

We have this system of discrete difference equations:

+=+ c

rSS tt 11 (1).

−+=+ k

SrSNN t

ttt 11 (2).

Replacing (1) into (2)

+

++=+ k

crS

crrSNN

t

t

tt

111

0

01 (4).

For better manipulation of (4) we can define α (5) as:

cr

+= 1α (5).

Then our recurrence equation (4) gets the form (6):

−+=+ k

SrSNN

tt

ttα

α 001 1 or:

( )020

1 Skk

rSNN tt

tt αα −=−+ (6).

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This is a telescopic formula given the first values or t, starting from t=0 and then t=1, t=2…etc.,

and it has the following solution:

)(,0 00

01 Skk

rSNNt −=−→=

)(,1 020

12 Skk

rSNNt αα −=−→=

)(,2 0420

23 Skk

rSNNt αα −=−→=

)(,1 020

1 Skk

rSNNt tt

tt αα −=−→+ + .

Adding and equaling member to member it is obtained (7):

( ) ( )[ ]ttt Sk

krS

NN 220

001 ...1...1 αααα +++−+++=−+ (7).

The summation of 1+α+ α2+…+ αt is a geometric progression and it may have a value Bt:

tt ααα ++++=Β ...1 2 (8).

Then if we multiply Bt by α we have:

12 ...1 ++++++=Β ttt ααααα

So now,

11 +−=Β−Β ttt αα

or:

( ) 111 +−=−Β tt αα .

If

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01 ≠+=crα , then

ααααα−−

=++++=Β+

11...1

12

tt

t

Likewise:

2

2222

11...1

ααααα−−

=+++++t

t .

Therefore:

( )

−−

−−

+=++

+ 2

12

0

10

01 11

11

αα

αα tt

t Skk

rSNN (9).

Using the original parameters r and c according to (5), then we have production of branches Nt+1

in terms of parameters and initial conditions (10):

( )

+−

+−

−−

+−

+=

++

+ 2

12

0

1

001

11

1111

cr

cr

S

crcr

kk

rSNN

tt

t or,

+−

+−

−−

+−

+= 2

2

00

0

11

1111

crcr

S

cr

cr

kk

rSNN

tt

t (10).

APPENDIX C

Convergence criterion.

In summary the convergence criterion can be portrayed as follows: Being L = kc, obtained above,

the fixed point of the function 221)( x

kcr

crxxf −

+= is the interval I, then

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(i) If f’(L) > 1, then the succession { } Ν∈ttN does not converge to L = kc, excepting the

case where the succession has a constant value L, it means that the succession would

have been reduced to {N0, N1,…, Nt, L, L, L,…}.

(ii) If 0< f’(L) < 1, then the succession { } Ν∈ttN converges to the limit L = kc, in a

monotonous way in the neighborhood of the fixed point L = kc.

Additionally:

1) We say that { } Ν∈ttN converges to L in the neighborhood of L if { } Ν∈ttN tends to L = kc

when N0 belongs to the neighborhood of L.

2) If , 221)( x

kcr

crxxf −

+= , then

( ) ( )

( ) ( )crck

kcr

crckx

kcr

cr

kcx

ckxkcr

crkcx

kcxckfxfkcf

kcx

kcxkcx

−=−+=

+−

+=

−−

+−

=−−

=

→→

1211lim

1lim)()(lim)('

22

2222

Therefore crkcf −= 1)(' . Since r and c are positive numbers

cr

−1 may not be higher than 1.

Thus, 11 <−cr and because 0 < f ’(kc) < 1 and therefore 0 <

cr

−1 < 1, then we should have

that r < c when there is a neighborhood for kc of

{ }δδδδ +<<−ℜ∈=+− ckxkcxkckc /),( ,

such as

xxfkc << )( when ),( δ+∈ kckcx

xxfkc >> )( when ),( kckcx δ−∈

consequently, if ),( δδ +−∈ kckcNn then,

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nn NNkc << +1 when ),( δ+∈ kckcNn

nn NNkc >> +1 when ),( kckcNn δ−∈

Therefore, the succession { } Ν∈ttN increases (or decreases) and is delineated by kc if

),(0 δ+∈ kckcN (or ),(0 kckcN δ−∈ respectively), and due to succession theory, the

succession { } Ν∈ttN converges in the neighborhood of kc. However, kc is the only limit of the

succession { } Ν∈ttN in ),( δδ +− kckc consequently { } Ν∈ttN converges to kc monotonously in the

neighborhood of kc.

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Figure Legends

Figure 1. Photographs of living colonies of the gorgonian coral Pseudopterogorgia

bipinnata (San Salvador, Bahamas). A-B. Examples of two young colonies at December 1999 (t)

and July, 2000 (t + 1), the arrows in t depict the daughter branches that turned into a new mother

branch in t + 1. C. Adult colony showing multiple growing mother branches (grid 10 x 10 cm).

Figure 2. Plots of the number of total branches vs. mother branches colony -1 with mean

and 95% predictive intervals indicated. A. From 20 colonies of Pseudopterogorgia bipinnata (c

= 19; r2 = 0.69; P<0.05). B. From 9 colonies of Plexaura flexuosa (c = 5; r2 = 0.88; P<0.05) (San

Salvador, Bahamas). Both inset photos: San Salvador, Bahamas.

Figure 3. A-C. Size frequency distribution of number of daughter branches branch -1 in

log-log scale. A. From 176 mother branches of 11 photographed colonies of Pseudopterogorgia

bipinnata (r2 = 0.93; P<0.05). B. From 211 mother branches of 6 photographed colonies of

Plexaura flexuosa (r2 = 0.92; P<0.05) (San Salvador, Bahamas). C. From a hypothetical colony

iterating expression (1) eleven times, with r = 12 (assuming an extension of r at every mother

branch per iteration) and c = 20, 109 branches mother branches (r2 = 0.96, P<0.05). D.

Cumulative time series of mother branches S, data from C.

Figure 4. Results from the iteration of the model for a hypothetical species with k = 30

and c = 20. A. Different number of new branches for Nt and N t + 1 with different values of r (4, 8,

10, 12, and 20). B. Cumulative total number of branches N for different values of r (4, 8, 10, 12,

and 20) along 6-month periods.

Figure 5. Rekin diagrams showing two different quantities behaviors for the number of

new branches (net growth per iteration) for the map of all Nt and N t + 1 (k = 30). A. When r = 4

and c = 20,. B. When r = 20 and c = 20.

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A B

C

t t + 1 t t + 1

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Mother branches0 5 10 15 20 25 30

To

tal b

ran

ches

0

200

400

600

800

1000

Mother branches0 10 20 30 40 50 60 70 80

To

tal b

ran

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0

100

200

300

400

A B

Page 35: Branching and Self-Organization in Marine Modular Colonial …pdodds/teaching/courses/2009-08UVM-300/docs/othe… · 1 Branching and Self-Organization in Marine Modular Colonial Organisms:

t0 2 4 6 8 10 12

S

0

20

40

60

80

100

120

Daughter Branches Branch -1

10 100

Bra

nc

h F

req

ue

nc

y

1

10

100

Daughter Branches Branch -11 10 100

Bra

nch

Fre

qu

ency

1

10

100

Daughter Branches Branch -110 100

Bra

nch

Fre

qu

ency

1

10

100

A B

C D

Page 36: Branching and Self-Organization in Marine Modular Colonial …pdodds/teaching/courses/2009-08UVM-300/docs/othe… · 1 Branching and Self-Organization in Marine Modular Colonial Organisms:

N t0 200 400 600

N t+

1

0

100

200

300

400

500

600

r =4 r =

20

A N t= N t+1

t 0 5 10 15 20 25 30

N (

cu

mu

lati

ve

)

0

1000

2000

3000

4000

5000

6000

r =4

r =20

B

Page 37: Branching and Self-Organization in Marine Modular Colonial …pdodds/teaching/courses/2009-08UVM-300/docs/othe… · 1 Branching and Self-Organization in Marine Modular Colonial Organisms:

N t0 100 200 300 400 500 600 700 800

N t+

1

0

100

200

300

400

500

600

700

800

N t= N t+1

N t0 100 200 300 400 500

N t+

1

0

100

200

300

400

500

N t= N t+1

BA

( ) ( )

−−−+= tt

t kSkrSNN 2121

3200

0

+−

+−

−−

+−

+= 2

2

00

0

11

1111

crcr

S

crcr

kkrSNN

tt

t

c >> r c ≅ r