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Review
A review on sample entropy applications for the non-invasive analysis of atrialfibrillation electrocardiograms
R. Alcaraz a,*, J.J. Rieta b
a Innovation in Bioengineering Research Group, University of Castilla-La Mancha, Campus Universitario, 16071 Cuenca, Spainb Biomedical Synergy, Electronic Engineering Department, Universidad Polite cnica de Valencia, Campus de Gandia, 46730 Gandia, Spain
Contents
1. Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
2. Short description of atrial fibrillation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
3. Surface ECG recordings . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
4. The concept of sample entropy. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
5. Atrial activity analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4
5.1. Paroxysmal AF termination prediction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4
5.2. Paroxysmal AF organization time course. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
5.3. Electrical cardioversion outcome prediction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
6. Ventricular activity analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
6.1. Paroxysmal AF onset prediction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
7. Conclusions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
Acknowledgements . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
References . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
Biomedical Signal Processing and Control 5 (2010) 114
A R T I C L E I N F O
Article history:
Received 19 May 2009Received in revised form 24 September 2009
Accepted 18 November 2009
Available online 29 December 2009
Keywords:
Atrial fibrillation
Electrocardiogram
Electrical cardioversion
Heart rate variability
Main atrial wave
Non-linear regularity metrics
Sample entropy
A B S T R A C T
The application of non-linear metrics to physiological signals is a valuable tool because hidden
information related to underlying mechanisms can be obtained. In this respect, approximate entropy
(ApEn)is the most popularnon-linear regularityindex thathas beenapplied to physiological time series.
However, ApEn presents some shortcomings, such as bias, relative inconsistency and dependence on the
sample length. A modification of ApEn, named sample entropy (SampEn), was introduced to overcome
these deficiencies. Recently, in the context of electrocardiography, SampEn has been applied to study
non-invasively atrial fibrillation (AF), which is the most common arrhythmia encountered in clinical
practice with unknown mechanisms provoking its onset and termination. Useful clinical information,
that could help for a better understanding of AF mechanisms, has been obtained through the application
of SampEn to electrocardiographic (ECG) recordings. This work reviews its application in the context of
non-invasive analysis of AF. During this arrhythmia, atrial and ventricular components can be regarded
as unsynchronizedactivities, whereby, the application of SampEn to the analysis of eachcomponentwill
be described separately.In first place, clinical challenges in which SampEn has beensuccessfully applied
to estimate AF organization from the atrial activity pattern are presented. The AF organization study can
provide information on the number of active reentries, which can help to improve AF treatment and to
take the appropriate decisions on its management. Next, the heart rate variability study via SampEn, to
characterize ventricular response and predict AF onset, is described. Through the aforementionedapplications it is remarked throughout this review that SampEn can be considered as a very promising
and useful tool towards the non-invasive understanding of AF.
2009 Elsevier Ltd. All rights reserved.
* Corresponding author. Postal Address: E.U. Politecnica de Cuenca, Campus Universitario, 16071 Cuenca, Spain. Tel.: +34 969 179 100x4847; fax: +34 969 179 119.
E-mail address: [email protected] (R. Alcaraz).
Contents lists available at ScienceDirect
Biomedical Signal Processing and Control
j o u r n a l h o m e p a g e : w w w . e l s e v i e r . c o m / l o c a t e / b s p c
1746-8094/$ see front matter 2009 Elsevier Ltd. All rights reserved.
doi:10.1016/j.bspc.2009.11.001
mailto:[email protected]://www.sciencedirect.com/science/journal/17468094http://dx.doi.org/10.1016/j.bspc.2009.11.001http://dx.doi.org/10.1016/j.bspc.2009.11.001http://www.sciencedirect.com/science/journal/17468094mailto:[email protected]8/14/2019 BioMed Signal Processing and Control
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1. Introduction
Non-linear analysis metrics are valuable in the assessment of
physiological time series, because hidden information related to
underlying mechanisms can be sometimes obtained [1,2]. To this
day, a high amount of non-linear complexity measures exists, such
as dimensions, Lyapunov exponents and entropies. However, their
computation is frequently compared with the problem of
insufficient number of data points [3]. Additionally, most
dimension and entropy definitions present application limitations
associated to real world time series, since all recorded data are of
limited duration and, to a certain degree, contaminated by noise. In
this respect, a 2% noise is serious enough to prevent accurate
estimation [4]. To solve the problems of short and noisy recordings
in physiological signals, Pincus [5] presented approximate entropy
(ApEn) as a measure of complexity that is applicable to noisy and
medium-sized datasets. ApEn determines the conditional proba-
bility of similarity between a chosen data segment andthe next set
of segments of the same duration. The higher the probability, the
smaller the ApEn value,indicating less irregularity of thedata. This
index has been successfully applied to analyze physiological
signals in diverse applications. For instance, ApEn has been used to
study intracranial hypertension episodes in pediatric patients with
traumatic brain injury [6,7], to analyze temperature registers withthe objective of predicting survival of critical patients [8,9], to
analyze time series generated by schizophrenic patients [6], to
study heart rate variability in disease and aging [10], etc.
Despiteits popularity, ApEn has some knownshortcomings, such
as bias, relative inconsistency, anddependence on thesamplelength
[2]. These shortcomings have led to the development of a related
non-linear measure, sample entropy (SampEn) [2]. Theoretically,
SampEnreduces thebias of ApEn by avoiding counting self-matches,
it is independent of the time series length, and it is more consistent
than ApEn. Additionally, SampEn is easier to compute than ApEn.
Thereby, this index has been also applied to analyze physiolog-
ical signals in several recent studies. Some examples are the study
of heart rate dynamics during episodes of mechanical ventilation
and acute anoxia in rats [11], the analysis of heart rate variabilityindisease and aging [10], the electroencephalographic background
activity characterization in Alzheimers disease patients [12], the
decision assessment of weaning from mechanical ventilation [13],
the neonatal sepsis diagnosis improvement by evaluating reduced
baseline variability and transient decelerations of heart rate [14],
the exercise work load influence analysis on RR and QT time-series
regularity [15], etc.
Moreover, a very recent application of SampEn has been the
non-invasive study of atrial fibrillation (AF). This disease is a
significant public health problem worldwide, affecting up to 1% of
the general populationand nearly 1 in 10 peopleover80 years [16].
Despite its high prevalence, the physiological mechanisms
provoking AF onset and termination are still unexplained and
the current AF treatments are not completely satisfactory [17]. A s aconsequence, the study of AF has been considered as a challenge
for researchers and a requirement for clinicians.
Within this context, useful clinical information that could
improve the understanding of AF mechanisms and the existing
treatments through the use of SampEn has been reported during
the last years. The purpose of this article is to review the use of
SampEn in the non-invasive analysis of AF. The manuscript
describes initially the concept of AF and how the surface
electrocardiographic (ECG) recordings were acquired. Next, a
formal description of SampEn together with the most widely used
parameters for its computation are introduced. Considering that
the atrial activity (AA) can be viewed as uncoupled to the
ventricular activity (VA) during AF [18], the applicationsof SampEn
to AA and VA are described separately. Firstly, clinical challenges in
which SampEn has been successfully applied to estimate AF
organization from the AA patterns are presented. The AF
organization study is a key aspect in the knowledge of the
arrhythmia, because it provides information on the number of
active reentries, which maintain and can perpetuate AF [1922].
Secondly, different applications of SampEn to VA analysis are
described. In this case, a non-invasive measure, such as the
heart rate variability (HRV), has been used for the VA study.
The HRVanalysis is a valuable tool,because it allows to observe the
hearts regulation by the autonomic nervous system, which is
believed to play an important role in the initiation of AF [23,24].
Finally, the concluding remarks will lead the paper to its end.
2. Short description of atrial fibrillation
Atrial fibrillation is the most commonly supra-ventricular
tachy-arrhythmia encountered in the daily clinical practice [17],
affecting roughly 2.2 million people in the US and 2 millions in
Europe, with a prevalence that doubles with each advancing
decade above 50 years and reaches almost 10% in octogenarians
[25]. This arrhythmia may appear on three different forms, namely
paroxysmal AF, i.e., self-terminating within 7 days, persistent AF, in
which intervention is required for its termination, and permanent
AF, in which sinus rhythm cannot be restored or maintained [17].Data from the Framingham heart study show that a patient with
AF has twice the risk of death than a healthy person [26,27], which
may be due to the fact that AF is one of the main causes of embolic
events, developing complications associated with cerebrovascular
accidents in 75% of the cases [28]. In addition, AF may cause
systemic thromboembolic complications, decrease exercise capac-
ity, impair ventricular function, reduce quality of life and incur
significant health care costs [27,29,30]. As a consequence, AF itself
does not represent a life-threatening condition, but it considerably
reduces the patients quality of life.
One normal cardiac cycle is started at the sinus node with the
depolarization of the right atrium, and spreads towards the entire
atria in a well-ordered manner. Atrial depolarization defines the P
wave in the ECG, see Fig. 1(a). Next, the depolarization impulsereaches the ventricles and their fast contraction produces the QRS
complex in the ECG. Finally, ventricular repolarization produces
the T wave and concludes the cardiac cycle. The manifestation of
AF is characterized by uncoordinated atrial activation with
consequent deterioration of atrial mechanical function. AF occurs
when the electrical activity in the atria degenerates from its usual
organized pattern into a rapid chaotic pattern. This disruption
results in an irregular and often rapid heartbeat that is classically
described as irregularly irregular and is due to the unpredictable
conduction of these disordered impulses across the atrioventricu-
lar node [17], see Fig. 1(b).
However, the physiological mechanisms provoking the onset
and termination of AF episodes arestill unexplained [17]. The most
widely accepted theory to explain AF mechanisms is based on thecontinuous propagation of multiple wavelets wandering through-
out the atria [17]. The fractionation of the wavefronts as they
propagate results in self-perpetuating independent wavelets,
called reentries. The number of simultaneous reentries depends
on the refractory period, mass and conduction velocity along the
atria, and these parameters present severe inhomogeneities in AF
[17]. It hasbeen also demonstratedthat thenumber of propagating
reentries into the atrial tissue is related to AF organization [1922],
therefore, a reliable organization estimation can provide very
useful information on the arrhythmia. In this respect, when AF
occurs, a notably disorganized atrial activity (AA) has been
observed on internal recordings [20,21,3133].
Through the aforementioned invasive recordings, such as
epicardial mapping and atrial electrograms, a characterization of
R. Alcaraz, J.J. Rieta/ Biomedical Signal Processing and Control 5 (2010) 1142
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the atrial electrical activity with high degree of detail have beenreached. Specially, the situations where the arrhythmia behaves
with remarkable variations, like spontaneous AF onset and AF
termination (spontaneous or induced by cardioversion), have been
studied. In this respect, a progressive increase in the number of
reentries during the first minutes after paroxysmal AF onset has
been suggested in a recent work [34]. Additionally, it has been
reported that the likelihood of spontaneous AF termination is
inversely related to the number of wavefronts propagating
throughout the atrial tissue [20]. In fact, several studies have
demonstrated a decrease in the number of reentries prior to
spontaneous AF termination, thus producing simpler wavefronts
[31,32,35]. Regarding the forced termination of AF through
electrical cardioversion (ECV), it has been shown that the higher
the number of propagating wavelets, the larger the atrial volumethat could support reentry propagation after the shock. As a
consequence, a negative ECV outcome could be more likelihood for
those patients [36].
An additional challenge in the understandingof AF should be to
obtain non-invasively the aforesaid information, such as some
authors have attempted [22]. Obviously, surface ECG recordings
can be obtained easily and cheaply, which is essential from a
clinical point of view. In addition, the risks for the patient
associated to invasive procedures could be avoided thanks to the
ECG [37]. Therefore, although the authors are conscious about the
remarkable existing applications of SampEn to biomedical signals,
this review is focused on a recent and challenging side of SampEn,
such as its application to study AF from the surface ECG.
3. Surface ECG recordings
The surface ECG recording provides a widely used and non-
invasive way to study AF. Some advantages of using the ECG include
the ability to record data for a long period of time and the minimal
costs and risks involved for the patient, in comparisonwith invasive
procedures [37]. However, because of ECG represents the hearts
electrical activity recorded on the thoraxs surface, the signal is
corrupted by different types of noise, which are picked up by the
volumeconductorconstitutingthe humanbody. Thereby, inorder to
improve later analysis, these recordings need to be preprocessed.
Filtering operations have been classically applied to the ECG for the
reduction of noise sources like, i.e., baseline wandering, high
frequency noise and powerline interference [38]. Concretely, in the
studies that will be next described, baseline wander was removed
making use of bidirectional zero-phase high-pass filtering with
0.5 Hz cut-off frequency [39], high frequency noise was reduced
withan eight-orderbidirectionalzero-phaseIIR Chebyshev low pass
filtering, whose cut-off frequency was 70 Hz [40], and powerline
interference was removed through adaptive notch filtering, which
preserves the ECG spectral information [41].
As described before, the ECG in AF is characterized by the
replacement of consistent P waves by rapid oscillations or
fibrillatory waves ( f waves) that vary in size, shape, and timing
[37], associated with an irregular ventricular response [17], see
Fig. 1. The f waves analysis from surface ECG recordings is
complicated by the simultaneous presence of ventricular activity,
which is of much higher amplitude. Thereby, the dissociation of
atrial and ventricular components is mandatory [42]. Nowadays,
several methods to extract the AA signal from surface ECG
recordings exist. The most powerful techniques are those that
exploit the spatial diversity of the multilead ECG [43], such as the
method that solves the blind source separation problem [18] or the
spatiotemporal QRST cancellation strategy [44]. However, the
performance of these techniques is seriously reduced when
recordings are obtained from Holter systems for paroxysmal AF
analysis. The reason is that, generally, Holter systems use no more
than two or three leads, which are not enough to exploit the ECGspatial information. For single-lead applications the most widely
used alternative to extract the AA is the averaged beat subtraction
(ABS). This method relies on the assumption that the average beat
can represent, approximately, each individual beat [42]. In the
studies that will be next described, ABS or some variant [45] have
been used to extract the AA from lead V1. This lead was chosen for
analysis because it contains the highest AA amplitude [37].
Additionally, in those cases where the sampling frequency was
originally low, the lead had to be upsampled to 1024 Hz to allow
better alignment for QRST complex averaging and subtraction, as
suggested in previous works [46].
4. The concept of sample entropy
Sample entropy examines a time series for similar epochs and
assigns a non-negative number to the sequence, with larger values
corresponding to more irregularity in the data [2]. Two input
parameters, a run length m and a tolerance window r, must
be specified for SampEn to be computed. SampEnm; r; N, being N
the length of the time series, is the negative logarithm of
the conditional probability that two sequences similar for m
points remainsimilar at the next point, whereself-matches are not
included in calculating the probability. Thus, a lower value of
SampEn also indicates more self-similarity in the time series [2].
Formally, given N data points from a time series
fxng x1;x2; . . . ;xN, SampEn can be defined as follows [2]:
(1) Form vector sequences of size m, Xm1;. . .
;XmN m 1,defined by Xmi fxi;xi 1; . . . ;xi m 1g, for 1 i
N m 1. These vectors represent m consecutive x values,
starting with the i th point.
(2) Define the distance between vectors Xmi and Xmj,
dXmi; Xmj, as the absolute maximum difference between
their scalar components:
dXmi; Xmj max k0;...;m1 jxi k xj kj : (1)
(3) For a given Xmi, count the number of j (1 j N m; j 6 i),
denoted as Bi, such that the distance between Xmi and Xmj is
less than or equal to r. Then, for 1 i N m:
Bmi r 1
N m 1
Bi: (2)
Fig. 1. Example of surface ECG recordings corresponding to (a) a patient in normal
sinus rhythm and (b) a patient affected by atrial fibrillation.
R. Alcaraz, J.J. Rieta / Biomedical Signal Processing and Control 5 (2010) 114 3
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(4) Define Bmr as
Bmr 1
N m
XNmi1
Bmi r: (3)
(5) Increase the dimension to m 1 and calculateAi as thenumber
ofXm1i within r ofXm1j, where j ranges from 1 to N m
(j 6 i). Then, Ami r is defined as
Ami r 1
N m 1Ai: (4)
(6) Set Amr as
Amr 1
N m
XNmi1
Ami r: (5)
Thus, Bmr is the probability that two sequences will match for
m points, whereas Amr is the probability that two sequences will
match for m 1 points. Finally, SampEn can be defined as
SampEnm; r limN! 1
lnAmr
Bmr
; (6)
which is estimated by the statistic
SampEnm; r; N lnAmr
Bmr
: (7)
Although m and r are critical in determining the outcome of
SampEn, no guidelines exist for optimizing their values. In
principle, the accuracy and confidence of the entropy estimate
improve as the number of lengthm matches increases. The number
of matches can be increased by choosingsmall m (short templates)
and large r (wide tolerance). However, penalties appear when too
relaxed criteria are used [5]. For smaller rvalues, poor conditional
probability estimates are achieved, while for larger r values, too
much detailed system information is lost and SampEn tends to 0
for all processes. To avoid a significant noise contribution on
SampEn calculation, one must choose r larger than most of thenoise [5].
The most widely established values for m and r are m 1 or
m 2 and r between 0.1 and 0.25 times the standard deviation of
the original time series fxng, such as Pincus suggested [47].
Normalizing r in this manner gives to SampEn a translation and
scale invariance, in the sense that it remains unchanged under
uniform process magnification, reduction, or constant shift to
higher or lower values [47]. These parameters produce a good
statistical reproducibility in time series of length larger than 60
samples, as considered herein [5,48,49]. In the majority of studies
where SampEn was applied to analyze physiologic signals, the
parameters m and r were studied in the range defined by Pincus
[14,50,51]. In addition, in studies where these parameters were
analyzedin a wider range, the best results were obtained forvalueswithin the Pincus range [13,15] or very close to it [3,23,52,53].
Thus, for the application of SampEn to AF organization estimation
fromrepetitive AA patterns, several combinations ofm and rvalues
within the range defined by Pincus were tested, but the optimal
results were achieved with m 2 and r 0:25 [51,54]. On the
other hand, for the study of HRV complexity via SampEn, the most
widely used parameters have been r 0:2 and m 2 [15,55,56] or
m 3 [14,23,52].
5. Atrial activity analysis
As the first part of the review, in this section several
applications of SampEn to the non-invasive study of AF are
introduced. To start, the varying number of reentries circulating
within the atria affects f waves regularity, since it is directly
related to the periodicity and repetitive morphology of the AA
pattern, such as invasive recordings have reported [1921]. Hence,
given that the AA organization provides information on the
number of active reentries, its non-invasive successful estimation
could improve AF treatment, which still is unsatisfactory, and
contribute to take the appropriate decisions on its management
[22]. In this respect, very recent studies have applied SampEn to
evaluate f waves regularity as a successful non-invasive AF
organization estimator [51,54,57]. The use of this non-linear index
is justified because non-linearity, as necessary condition for a
chaotic behavior,is present in thediseasedheartwithAF at cellular
level, and atrial electrical remodeling in AF is a far-from-linear
process [58,59]. Electrical remodeling can be described as the
progressive shortening of effective atrial refractory periods, thus
increasing the number of simultaneous reentries and, as a
consequence, the possibility of AF perpetuation [17]. In the next
subsections, the state of the art related to the non-invasive AF
organization estimation based on SampEn is summarized. These
applications demonstrate how non-linear biomedical signal
processing could contribute in the improvement of AF treatments.
5.1. Paroxysmal AF termination prediction
About 18% of paroxysmal AF degenerates into persistent AF in
less than 4 years [60]. The associated risks of persistentAF arequite
serious because it predisposes to thrombus formation within the
atria that can cause stroke or any other thromboembolic events
[28]. Therefore, the early prediction of paroxysmal AF maintenance
is crucial, because appropriate interventions may terminate the
arrhythmia and prevent AF chronification. In contrast, the
prediction of spontaneous AF termination could avoid unnecessary
therapy, reduce the associated clinical costs, and improve the
patients quality of life.
In previous invasive studies where AF termination was
achieved by using different therapies, a decrease in the number
of reentries prior to AF termination was observed [21,31,32,35].
This decrease in the number of reentries produces simplerwavefronts into the atrial tissue and irregular f waves evolve to
regular P waves [37]. Therefore, the AA slightly evolves to a more
organized pattern before AF termination. This feature has been
used to predict paroxysmal AF termination.
In thissense, someauthors applied non-linearregularity indexes
to characterize AA organization from the surface ECG, but their
results did not reveal significative differences between terminating
and non-terminating paroxysmal AF episodes. The low signal to
noiseratio ofthe AAwas believed tobe the main reason tothisresult
[61,62]. In orderto reduce the nuisance signals and enhance the AA,
the application of two wavelet decomposition analyses to this atrial
signal has been proposed [54], such as Fig. 2 shows. In the first
analysis (block 1), the wavelet coefficient vector related to the scale
containing the dominant atrial frequency (DAF), i.e., the frequencywith the highest amplitude within the typical 39 Hz AF frequency
range [63,64], was reconstructed back to the time-domain. As a
result, nuisance signals were removed and the fundamental
waveform associated to the AA, called main atrial wave (MAW),
was obtained. In the second case (block 2), the same wavelet
coefficient vector was linearly interpolated to obtain a vector with a
number of samples equal to the original AA signal. Finally, the
organization of the two provided time series was estimated via
SampEn to obtain two different and independent classifications of
paroxysmal AF into terminating and non-terminating episodes.
In order to validate this methodology, the database generated
forthe Computers in Cardiology Challenge 2004, whichis available
on Physionet [65], was used. This data set is composed by a
learning set consisting of 20 paroxysmal AF recordings withknown
R. Alcaraz, J.J. Rieta/ Biomedical Signal Processing and Control 5 (2010) 1144
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termination properties and a test set of 30 recordings. The non-terminating paroxysmal AF episodes were observed to continue in
AF for, at least, 1 h following the end of the excerpt (group N). In
contrast, spontaneously terminating AF episodes terminated
immediately after the end of the extracted segment (group T).
The independent application of each analysis block to the
learning set allowed to obtain a predictive accuracy of 90% (18 out
of 20) with 80% sensitivity (i.e., proportion of non-terminating
episodes correctly classified) and 100% specificity (i.e., percentage
of terminating episodes correctly discerned) for the first block and
85%(17 out of 20), with 100% sensitivity and70% specificity, forthe
second block, see Fig 3. The observation on these results in which
non-terminating AF recordings that presented a high DAF, and
terminating episodes having a low DAF, were incorrectly classified,
suggested the combination of both blocks to obtain an improvedclassification strategy. Thus, when both blocks classified different-
ly an AF episode and the DAF was lower than 5.5 Hz, the
classification provided by block 1 was considered. On the contrary,
if the DAF was higher than the mentioned threshold, the
classification provided by block 2 was chosen. With this combined
methodology, 100% (20 out of 20) and 93.33% (28 out of 30) of the
learning and test recordings were correctly discriminated,
respectively, with 93.75% sensitivity and 92.86% specificity for
the test set.
Additionally, the results provided by block 1 showed that
terminating episodes presented lower SampEn values and,
consequently, higher AA organization, than non-terminating
episodes, see Fig. 3(a). This observation was in agreement with
the AA organization increase prior to AF termination reportedthrough invasive recordings [21,31,32,35] which, at this moment,
is clinically accepted [66]. As a consequence, it can be considered
thatthe invasively observed increase in AF organizationis reflected
on the surface ECG when proper analysis tools are used.
Regarding a specific scale of block 2, the wavelet coefficient
vector contained the similarity evolution along time between the
analyzed signal and the scaled mother wavelet. A high regularity
value in this time series indicated a constant waveform across the
time period under analysis. On the contrary, low regularity implied
variable waveforms that, for instance, may evolve to a more
organized pattern. This fact was considered to justify the results
obtained in block 2, where terminating paroxysmal AF episodes
presented higher vector irregularity, see Fig. 3(b). Hence, the AA
evolution from disorganized f waves to organized P waves, that
Fig. 2. Block diagram describing the proposed methodology to predict AF termination [54]. Firstly, the ventricular activity is removed from the input ECG to obtain the AA.
Next, a seven levels wavelet decomposition was applied using bior4.4 as wavelet family. The scale or frequency sub-band containing the DAF was selected and two
organization analyses were carried out. In block 1, the organization of this scale, reconstructed back to time-domain, was obtained using SampEn to discern between
terminating and non-terminating AF episodes. In block 2, the wavelet coefficient vector organization of the selected scale was estimated to perform a more robust
discrimination process.
Fig. 3. Learning signal classification into terminating and non-terminating AF
episodes obtained with (a) block 1 and (b) block 2 of the methodology presented in
Fig. 2[54]. SampEn values obtained for the 20 learning episodes together with the
mean and standard deviation for each group are displayed. Optimal thresholds are
represented with a dashed line.
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takes place in AF recordings prior to itstermination [37], maycause
the described behavior in the wavelet coefficient vector.
Finally, notice that several previous works have tried to predict
the spontaneous AF termination from surface ECG recordings
[6770]. To this respect, Table 1 presents some of the most recently
proposed methods. Most of them analyzed the DAF decrease,
which was previously reported through invasive studies during
catheter ablation [71]. However, in order to improve AF termina-
tion prediction, other parameters were analyzed and combined
with the DAF. In this respect, Petrutiu et al. [72] studied the AA
peak power evolution within the two last seconds of the
recordings. This so short studied time interval couldlimit seriouslytheir methods reliability, especially when other works did not find
significative differences between the peak power of terminating
and non-terminating AF episodes [67]. In Hayn et al. [73], an
evolution of the averaged RR time interval was studied to correlate
ventricular with atrial activities (represented by the DAF). In this
method, two coefficients were empirically fitted to the analyzed
signal set, but results were very variable, such as the poor
outcomes obtained analyzing other databases have corroborated
[68]. In addition, the relation between atrial and ventricular
activities was also studied in other works, but lower predictive
capacity than in the previous method was obtained [67]. In other
studies, different timefrequency transforms were used to
evaluate the AA timefrequency evolution [61,70,74]. However,
the reported results did not reveal notable improvements in theprediction of AF termination. Parameters relative to the AA energy
distribution, such as AA amplitude [70] or exponential decay [75] ,
were also studied, but low significant differences between
terminating and non-terminating AF episodes were obtained
[76]. Therefore, the combined methodology described in this
review could be considered as the most robust and reliable
discrimination procedure, because it is completely based on AF
physiological observations, which have been reported through
invasive studies [20,21,3133]. In addition, a predictive capacity
higher than the majority of the indicated studies was obtained.
5.2. Paroxysmal AF organization time course
As previously described, the treatment of AF patients is still
unsatisfactory, due to the progressing nature of this arrhythmiaand its physiological mechanisms, making the onset and termina-
tion of AF episodes still unexplained [17]. Thus, the progressing
evolution analysis of paroxysmal AF could help for a better
understanding of its mechanisms. In this sense, as previously
mentioned, recent invasive studies have evaluated AF organization
time course during different episode parts. Concretely, the
organization in the first minutes after AF onset has been evaluated
by means of a cycle length beat-to-beat analysis and wave
similarity [34]. On the other hand, organization before AF
termination has been successfully evaluated by using different
techniques [21,31,32,35].
From a non-invasive point of view, a very recent study has
applied SampEn to the onset and offset of paroxysmal AF episodes
to evaluate their organization time course [57]. In this work, forreducing noise, nuisance signals and enhancing the AA, the MAW
was obtained through selective filtering of the AA by tracking its
DAF, such as Fig.4 shows. The MAW organization was estimated by
Table 1
Comparison between some of the most recent studies presented to predict paroxysmal AF termination.
Study Database Database description a Short descript ion of m et hods Best results b
Alcaraz and Rieta [54] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Regularity analysis via SampEn of
time and wavelet domains of the AA
100% learning, 93.33% test
Alcaraz et al. [70] Own Database with 5 0 episodes 2 1 N and 2 9 T Analy sis of t ime and f requency
parameters obtained from the AA
92%
Chiarugi et al. [67] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Discriminant model based on time and
frequency parameters obtained from
the atrial and ventricular activities
100% learning, 90% test
Hayn et al. [68] Cinc/Challenge 2004 together
with MIT-BIT Atrial Fibrillation
database [65]
Not speci fied Expe rimental combination o f the
DAF with the mean RR interval
< 60%
Nilsson et al. [61] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Analysis of time and frequency
parameters and non-linear indices
obtained from the AA
95% learning, 90% test
Petrutiu et al. [72] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Experimental combination of AA peak
power evolution within the two last
seconds of the episode with the DAF
90% learning, 96.67% test
Mainardi et al. [62] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Neural network with time, frequency
and non-linear parameters obtained
from the AA and RR series
90% learning, 86.67% test
Hayn et al. [73] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Same methodology than in
Hayn et al 2007 [68]
100% learning, 93.33% test
Mora et al. [74] Cinc/Challenge 2004 [65] Learning set: 10 T and 10 N
Test set: 14 T and 16 N
Evaluation of time and frequency
parameters obtained from the AA
90% learning, 90% test
a
T = terminating paroxysmal AF episodes; N = non-terminating episodes.b Percentage of episodes correctly classified.
Fig. 4. Blockdiagram describingthe strategy proposed for AF organizationvariationassessment [57]. Thin selectivefilteris appliedto theatrial signal. Thefilteris trackingthe
dominant atrial frequency. Finally, SampEn is computed on the resulting signal.
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applying SampEn in non-overlapping segments of 2 s. Overlappingbetween segments was discarded in order to not benefit the
organization assessment, to obtain more consistent results and to
increase the proposed strategy reliability.
With the described method, 25 ECG recordings continuously
registered during the first 5 min following paroxysmal AF onset
and available on Physionet [65] were studied. A progressive
organization deterioration in the first 3 min after the onset takes
place, as it can be observed in Fig. 5(a). This finding was in
agreement with the conclusions reported from invasive recordings
by several authors [34,77,78] and suggested that higher rates of
success to revert the arrhythmia could be obtained through the
early delivery of pacing, that is, when the episodes are more
organized.
On the other hand, 20 ECGs, also available on Physionet [65],containing the last 2 min before spontaneous AF termination were
also analyzed. In this case, the MAW organization analysis showed
a progressive organization increase during the last minute, see Fig
5(b). This organization variation was in agreement with the results
presented for AF termination prediction in the previous subsection
and those obtained by other authors, such as Takahashi et al [31]
and Hoekstra et al [33], from invasive recordings.
5.3. Electrical cardioversion outcome prediction
When a patient is in persistent AF, it is a common practice to
restore and maintain normal rhythm. In this respect, sinus rhythm
restoration is required to reduce the risk of stroke and improve
cardiac output [17]. This approach is based, in part, on dataindicating that AF is a predictor of death in patients with heart
failure and suggesting that the suppression of AF may favorably
affect the outcome.
Generally, electrical cardioversion (ECV) is the most effective
alternative to revertAF back to sinus rhythm[79]. However, because
of the high risk of AF recurrence, especially during the first 2 weeks
following the procedure [80], and because of potential collateral
effects of ECV [79], it is clinically important to predict normal sinus
rhythm (NSR) maintenance after ECV before it is attempted. With
this objective, in a recent work [51], the AA organization was non-
invasively estimated relying on the hypothesis that NSR mainte-
nance would be more likelihood in patients who present a more
organized AA. This assumption was based on the observation that
themore disorganized theAA, thehigher thenumber of propagating
wavelets [20], and the larger the atrial volume that could supportpropagation of reentries after the shock [36].
As for paroxysmal AF termination prediction, in this work, a
wavelet bidomain sample entropy methodology was used to
reduce nuisance signals and enhance the AA [51]. In this case,
however, when the classification result provided by blocks E1 and
E2 in Fig. 2 was different, two indices indicating the closeness
between the SampEnvalue of the analyzedsignal and the optimum
discrimination threshold for both time and wavelet domains were
defined. Thus,only theresult from the block presenting thehighest
index was considered.
Forty patients with persistent AF lasting for more than 30 days,
undergoing the first attempt of ECV, were analyzed to validate the
proposed method and to predict the ECV outcome. All the patients
were under drug treatment with amiodarone and were followedduring the first 4 weeks. The wavelet bidomain technique was
applied to the 30 s length segment preceding the ECV of each
patient. A diagnostic accuracy of 85.71% (30 out of 35) with 90.48%
sensitivity (i.e., proportion of ECVs relapsing to AF correctly
classified) and 78.57% specificity (i. e. percentage of ECVs resulting
in NSR correctly discerned) was obtained for the first block, see
Fig. 6(a). The accuracy for the second block was 82.86% (29 out of
35) with 80.95% sensitivity and 85.71% specificity, see Fig. 6(b).
Finally, by combining both organization estimation strategies, an
accuracy of 94.29% (33 out of 35), with 95.24% sensitivity and
92.86% specificity, was achieved.
Moreover, block 1 results showed that patients relapsing to AF
presented higher SampEn values and, therefore, lower AA
organization, than those resulting in NSR after 4 weeks, seeFig.6(a). This observation was in agreement withfindings reported
by other works, such as the higher the AA organization, the higher
the success rates in cardioversion of AF [19,20] and the lower the
energy required for successful cardioversion [36]. Therefore,
obtained results suggested that the higher the number of reentries
wandering throughout the atrial tissue, the lower the probability of
successful ECV. Regarding the block 2, the presence of a more
stable AA waveform in organized atrial activities [37] was
considered to justify that patients who relapsed to AF presented
lower wavelet coefficient vector regularity than those who
remained in NSR. In addition, it is noteworthy that five patients,
in which NSR was not immediately restored after ECV, presented
the lowestAA organizationbothin time and wavelet domains,thus
increasing the obtained results consistency.
Fig. 5. Atrialactivity organizationtime course for all the analyzed recordings [57]: (a)average organizationresults forthe first 5 min after AF onset and(b) average results for
the last 2 min before AF termination.
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In previous works, some of which are summarized in Table 2,
several clinical, electrophysiological and demographic features,
such as AF duration, type of underlying disease, patient age, left
atriumdiameter, left ventricularfunction or continuationof therapy
with antiarrhythmic drugs, were proposed as predictors of
successful AF cardioversion and sinus rhythm maintenance.
However, the predictive value of these parameters was far from
optimal [81]. Regarding the explicit analysis of AF organization,
Holmqvist et al. [82] evaluated a parameter obtained from time
frequency analysis of theatrial signals, such as harmonic decay. This
parameter was designed to be an indexof the waveform shape(and
indirectlyorganization) of theatrialcomponent in theECG,but a lownumber of patients relapsing to AF were correctlyidentified(47%,14
out of30). InBerget als work [83], ventricular rhythmwas analyzed
usingthree-dimensionalRR intervals plots,quantifyingclusteringof
RR intervals. The authors speculated that RR intervals clustering
represents a relatively high organization degree of atrial fibrillatory
activity, and hypothesized that ECV would be more effective in
patients with clustering. However, only 50%(11 outof 22)of patients
who relapsed to AF during the first 4 weeks following ECV were
correctly discerned. With respect to the use of advanced digital
signal processing tools, Watson et al. [84] examined a variety of
wavelet transform-based statistical markersas potential candidates
to predict the post-cardioversion patient status after 1 month
followingECV,and 88% (15 out of 17) sensitivityand 100% (13 out of
13) specificity were obtained. Zohar et al. [85] developed a non-deterministic model for predicting sinus rhythm maintenance after
ECV, obtaining 71% (15 out of 21) sensitivity and 96% (22 out of 23)
specificity when the patients were followed up during the first 3
months after ECV. Lombardi et al. [86] used spectral analysis of
short-term heart rate variability (HRV) to evaluate the role of the
autonomic nervous system after sinus rhythm restoration, and 76%
(19 out of 25) sensitivity and 90% (61 out of 68) specificity were
obtained after thefirst 2 weeks followingECV. Other works analyzed
the DAF as a predictor ofECV outcome [8789]. However, the results
were conflicting and, therefore, inconclusive. The latest investiga-
tion suggested that the confounding effect of antiarrhythmic drug
therapy could explain the differences among these results [88];
however, this aspect still remains unclear. Finally, a recent study
showed that the amplitude of f waves had the ability of predicting
ECV result with a sensitivity of 83.87% and a specificity of 72.73%,
which could be improved with a discriminant model based on this
amplitude and the DAF (83.87% sensitivity and 86.36% specificity)
[90]. As a consequence, havingall these methods andtheiroutcomes
in mind, the methodology based on AF organization estimation [51]
wasconsidered by theauthors as a promising predictor of successful
cardioversion and NSR maintenance following ECV of persistent AF
patients, given that its diagnostic ability was higher than those
provided by other presented methods.
6. Ventricular activity analysis
The second part of this review summarizes the applications of
SampEn, focused on theventricular activity,to thesurface ECGin AF.
In this respect, ventricular response has been widely characterized
making use of the heart rate variability (HRV) analysis, since the
state of the autonomic nervous system, and related diseases, can be
investigated non-invasively using relatively basic signal processing
techniques [91]. Thus, in recent years, numerous measures have
been suggested to characterize HRV. In this sense, several time
domain metrics, which quantify the correlation between different
RR intervals, have been proposed. However, the exclusion of non-
normal RR intervals, provoked by false detection of R peaks, is an
important step to obtain more reliable outcomes [92]. The resulting
interval series is commonly referred as the normal-to-normal
intervals (NN intervals), see Fig. 7(a). Thus, somemetrics commonlyobtained from this series have been the standard deviation of NN
intervals(SDNN), thenumber of successivepairs of NN intervals that
differ more than 50 ms (pNN50) and the root mean square of the
differences between consecutive NN intervals (RMSSD) [92]. More
advanced measures are those based on spectral analysis of the heart
rhythm, since oscillations embedded in the rhythm, for example,
due to respiratory activity or variations in blood pressure, can be
quantified from the corresponding peaks in the estimated power
spectrum [93]. The oscillations are characterized by low-frequency
components, which typically are located in the interval below
0.5 Hz, see Fig. 7(b). Unfortunately, the oscillations are sometimes
poorly pronounced. This problem is commonly alleviated by
quantifying, instead, the power of low-frequency (LF) and high-
frequency (HF) components in the intervals 0.040.15 Hz and
Table 2
Comparison between some of the most recent studies presented to predict ECV outcome.
Study Database Database description Short description of methods Best results a
Alcaraz and
Rieta [90]
Own database
with 63 patients
31 relapsed to AF,
22 maintained NSR and
10 presented unsuccessful ECV
Discriminant model based on time and
frequency parameters obtained from
the AA
83.87% sensitivity,
86.36% specificity
Alcaraz and
Rieta [51]
Own database
with 40 patients
21 relapsed to AF, 14 maintained NSR and
5 presented unsuccessful ECV
Regularity analysis via SampEn of time
and wavelet domains of the AA
95% sensitivity, 93% specificity
Watson
et al. [84]
Own database
with 30 patients
17 relapsed to AF and 13 maintained NSR Assessment of several wavelet
transform-based statistical markers
88% sensitivity, 100% specificity
Holmqvist
et al. [88]
Own database
with 175 patients
90 relapsed to AF, 77 maintained NSR
and 8 presented unsuccessful ECV
Analysis of atrial fibrillation rate
(i.e., DAF multiplied by 60)
79% sensitivity, 80% specificity
Holmqvist
et al. [82]
Own database
with 54 patients
30 relapsed to AF and 24 maintained NSR Assessment of the atrial harmonic
decay with time-frequency analysis
of the ECG
47% sensitivity, 92% specificity
Meurling
et al. [89]
Own database
with 37 patients
10 relapsed to AF, 22 maintained NSR and
5 presented unsuccessful ECV
Analysis of the dominant atrial cycle
length and clinical characteristics
Non-significant differences
between groups
Zohar
et al. [85]
Own database
with 44 patients
21 relapsed to AF and 23 maintained NSR Non-deterministisc model based on
genetic programming
71% sensitivity, 96% specificity
Berg
et al. [83]
Own database
with 66 patients
32 relapsed to AF, 22 maintained NSR
and 12 presented unsuccessful ECV
Analysis of 3D RR intervals as a
quantifier of AF organization
50% sensitivity, 56% specificity
Bollmann
et al. [87]
Own database
with 44 patients
13 relapsed to AF, 2 to atrial flutter
and 29 maintained NSR
Experimental combination of atrial
fibrillatory rate with the left atrium
diameter
89% sensitivity, 78% specificity
Lombardi [86] Own database
with 93 patients
25 relapsed to AF and
68 maintained NSR
Spectral analysis of short-term HRV 76% sensitivity and 90% specificity
a
Sensitivity= proportion of patients who relapsed to AF correctly identified. Specificity = percentage of patients who resulted in NSR properly classified.
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0.150.40 Hz, respectively [93]. The spectral power measured in
these two intervals has been closely associated with autonomic
balance. An increase in sympatheticactivity is related to an increase
of the LF power, whereas an increase in parasympathetic or vagal
activity is primarily related to an increase of the HF power [93,94].
Hence, the ratio between these two spectral power measures has
beenconsidered as an index of autonomicbalance [86]. However, in
an increasingnumber of recentpapers, controversialopinionson the
role of vagal and sympathetic systems in AF have been reported
[94,95]. Thereby, to obtain relevant clinical information and a better
understanding of the underlying mechanisms of HRV, several non-
linear complexity metrics have been studied in recent works.
Moreover, relationships with the classical time and frequency
domains linear measures have been also found out [15,94]. The
application of non-linear metrics for HRV analysis is justified given
that non-linear processes are involved in the genesis of heart rate
modulation [96,97]. Within the aforementioned context, the next
subsection summarizes how SampEn has been applied to HRV
analysis in an attempt to predict the onset of paroxysmal AF.
6.1. Paroxysmal AF onset prediction
The prediction of spontaneous AF onset is clinically important
because the possibility of electrically stabilizing and preventing theonset of atrial arrhythmias with different atrial pacing techniques
increases notably. Dual chamber atrial pacing may reduce the
heterogeneity of atrialrefractoriness, manifested by P waveduration
changes on the surface ECG recording. Preliminary studies by
Prakash et al. [98] have indicated that acute suppression of
paroxysmal AF is possible in selected patients with dual-site right
atrial pacing from the coronary sinus ostium and high right atrium.
Theadvances in anti-arrhythmia pacingand drug managementmay
be applied to prevent the acute onset of paroxysmal AF prior to the
loss of sinus rhythm. The maintenance of sinus rhythm can lead to
decreased symptoms, improved hemodynamics and, possibly, a
decrease in the atrial remodeling that causes increased susceptibili-
ty to future episodes of paroxysmal AF [99]. In addition, a reduction
in the risk of thromboembolic events can also be remarkable.Themechanisms leading to the initiation of AF have been under
intensive investigationwithin the last decade. It has beenproposed
that the autonomic nervous system might have a role in the
initiation of this arrhythmia. Concretely, increased vagal tone can
predispose to the development of AF [23]. Thereby, in several
works, SampEn has been applied to study the HRV complexity
evolution in the minutes preceding spontaneous AF onset. In this
sense, Tuzcu et al. [23] studied the HRV complexity of 30 min
Fig. 6. Classification into ECVs resulting in NSR and relapsing to AF after 4 weeks
following the procedure obtained with the organization analysis of (a) block 1
(time-domain) and (b) block 2 (wavelet-domain) showed in Fig. 2[51]. SampEn
values obtained for all the analyzed signals together with the mean and standard
deviation for each group are displayed. Optimal thresholds are represented with a
dashed line.
Fig. 7. For the analysis of HRV time series, the exclusion of non-normal RR intervals, provoked by false detection of R peaks, is crucial in the outcomes [92]. The resulting
interval seriesis referred as thenormal-to-normalintervals, whichare presentedin (a)acquired duringAF conditions. On theotherhand, thepowerspectrumof theprevious
series is plotted in (b).
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length segments containing the ECG immediately preceding a
paroxysmal AF episode (pre-AF) and 30 min length segments of
ECG during a perioddistant,at least 45 min, from any episode of AF
(AFd). This data set was available on Physionet [65] and called
unedited data. SampEn of the HRV was found to be significantly
reduced in the segments preceding AF compared with those
distant from any AF occurrence, see Fig. 8(a). The same study wasrepeated, but premature atrial complexes were previously
removed. In this case, the data set was called edited data and a
less pronounced difference was provided, such as Fig. 8(b) shows.
The authors considered that decreased heart rate complexity, for
both edited and unedited data, reflects a change in cardiovascular
autonomic regulation that preconditions AF onset.
Additionally, the segments preceding AF onset were divided
into three successive 10 minperiods and analyzed with SampEn in
order to show the presence of a possible trend. A decreasing trend
towards the onset of AF in the unedited data was observed, see
Fig. 9(a). After the removal of ectopic beats, a similar decrease in
entropy towards AF onset was also noticed, but it was less
pronounced, such as Fig. 9(b) shows. According to the authors, the
decrease in SampEn before the onset of AF resulted mainly from
Fig. 8. Error bar plots of SampEn values revealing 95% of the confidence interval for
HRV complexity of 30 min length segments during a period distant from any
episode of AF (AFd) and immediately preceding a paroxysmal AF episode (pre-AF).
The unedited data are plotted in (a), whereas the edited data, after removing the
premature atrialcomplexes, areplotted in (b). Theplot hasbeen recreatedfrom the
data in [23].
Fig. 9. Analysis of the segments preceding AF onset, divided into three successive
10 min periods, in order to show the presence of a possible trend. The plots show
mean SampEn values of (a) unedited and (b) edited RR intervals [23].
Fig. 10. Analysis of the HRV complexity considering the autonomic profile and the
clinical history of patients before AF onset. Theplot showsSampEn values of the RR
interval data from vagally mediated and sympathetically mediated AF before its
onset [55].
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atrial ectopy. Moreover, the decrease was in consistent agreement
with the observed ectopic firing significance, that serves as a
trigger of paroxysmal AF, in subjects without evidence of other
structural cardiac abnormalities [100].
On theother hand,becauseof AF hasbeen classifiedinto vagally
mediated and sympathetically mediated types, based on theautonomic profile and the clinical history [24], Shin et al [55]
analyzedthe HRV complexity in these types of AF. In this study, for
44 episodes, divided in three subgroups (vagal, sympathetic and
non-related types), the 60 min segment of normal sinus rhythm
preceding AF onset was divided into 6 periods of 10 min. The
application of SampEn to the HRV of these segments revealed a
linear decrease of complexity irrespective of AF type, see Fig. 10. In
addition, this result in SampEn before AF onset was not affected
whether excluding the ectopic beats or not. In theauthors opinion,
the meaning of this progressive SampEn reduction before the start
of AF was that the heart rate became more orderly before AF; that
is, there is a loss of normal healthy complexity, thus leading to a
cardiac environment vulnerable to the occurrence of AF.
In the aforesaid work, classical linear parameters, suchas SDNN,RMSSD, pNN50, LF and HF,were also computed. However, SampEn
showed to be a better predictor of AF onset than the mentioned
features [55]. Nevertheless, a very recent study has proposed a
successful method to predict AF onset. The method is based on an
artificial neural network (ANN) with spectral and non-linear
complexity parameters (including SampEn) of the HRV as input
features [53]. As in Tuzcu et al. [23], the proposed method was
validated making use of a data set available on Physionet [65] and
composed by 30 min length ECG segments preceding AF onset and
distant 45 min from any AF occurrence. A diagnostic accuracy
higher than 82% was reached. Additionally, the possibility of long-
term paroxysmal AF onset prediction was studied making use of
other database also availableon Physionet [65]. Thus,sinus rhythm
recordings with duration from 60 to 360 min preceding AF onset
were tested. Concretely, each recording was split into consecutive
30 min overlapped segments and the ANN output was investigat-
ed. As a result, classification between distant from AF HRV
segments and AF preceding segments was performed before AF
onset. Thismethod producedpositive results, leading to predict the
onset of paroxysmal AF with 6221 min in advance. This resultproved that theANN classifierwas sensible to thevariations in HRV
dynamics that take place before a paroxysmal AF event. Moreover,
the classifier successfully identified these variations during distant
AF prognosis. This fact is in agreementwith other studies reporting
the possibility of predicting paroxysmal AF onset within 60 min
time [101,102].
In the literature, other methods based on different approaches
to those previously explainedcan also be found, see Table 3. Tothis
respect, considering that an abnormal P wave prolongation reflects
the presence of intra-atrial conduction defects [103], significant
information was extracted by evaluating the normal atrial
activation extent through the study of the P wave time domain
features. Thus, some deeply analyzed characteristics of the P wave
were its duration, obtained from each individual beat [104] or anaveraging of several beats [105], the dispersion [104] and variance
[106] of its duration, its morphology forpremature heart beats [68]
or theamplitude of atrial late potentials [107]. However, the lack of
a standard definition of P wave onset and termination provokes
that the method based on time domain analysis of P wave cannot
be easily compared [108].
On the otherhand, Vikmanet al. [109] found that thenumber of
ectopic beats seems to increase prior to the arrhythmia onset. This
phenomenon is known as being the trigger for the arrhythmia on a
predisposing substrate. Thereby, several works tried to find a
correlation between premature complexes rate and AF onset. Most
of them were presented at the Computers in Cardiology 2001
Challenge [110]. However, the most relevant work was the
presented by Thong et al. [111], in which an analysis of isolated
Table 3
Comparison between some of the most recent studies presented to predict AF onset.
Study Database Database description Short description of methods Best results a
Chesnokov [53] Some segments extracted from
the episodes of Cinc/Challenge
2001 database [65]
85 before AF and 67
distant from AF
Neural network based on spectral
and non-lineal parameters obtained
from HRV
76.19% sensitivity,
93.75% specificity
Hayn et al. [68] Episodes selected from Cinc/
Challenge 2001 and MIT-BIT
Atrial Fibrillation databases [65]
91 before AF and 94
distant from AF
Morphology analysis of the P waves
of premature heart beats
77% sensitivity,
72% specificity
Budeus et al. [107] Own database with 250 episodesbefore AF Not specified Assessment of pathologicalchemoreflexsensitivity and atrial
late potentials
Classification resultsnot provided
Tuzcu et al. [23] Learning episodes of Cinc/
Challenge 2001 database [65]
25 before AF and 25
distant from AF
Analysis of HRV complexity through
SampEn
Classification results
not provided
Shin et al. [55] Own database with 44 episodes
preceding AF onset
Not specified Evaluation of linear and non-linear
parameters from HRV
Classification results
not provided
Thong et al. [111] All the episodes of Cinc/
Challenge 2001 database [65]
Learning: 25 before
AF and 25 distant
from AF. Test: 50
before AF, 50 distant
from AF
Analysis of isolated premature atrial
complexes not followed by a regular
RR interval
89% sensitivity, 91% s
pecificity for test set
Hickey et al. [112] Episodes selected from several
databases. Some are available
on Physionet [65]
53 before AF and 94
distant from AF
Discriminant model based on HRV spectral
parameters and the number of atrial
premature complexes
81.1% sensitivity and
85.1% specificity
Ros et al. [113] Learning episodes of Cinc/
Challenge 2001 database [65]
25 before AF and
25 distant from AF
Modular classification algorithm based on
the nearest K-neighbors and parameters
related to both P wave and QRS complex
96% sensitivity,
88% specificity
Andrikopoulos et al. [106] Own database with 110 episodes 60 before AF and
50 distant from AF
Evaluation of P wave duration variance 88% sensitivity,
75% specificity
Vikman et al. [109] Own database with 92 episodes
preceding AF onset
Not specified Assessment of traditional time-frequency
and non-linear parameters from HRV
Classification results
not provided
Dilaveris et al. [104] Own database with 100 episodes 60 before AF and
40 distant
from AF
Analysis of the maximum P wave duration
and its dispersion
83% sensitivity and
85% specificity
a Sensitivity= proportion of episodes preceding AF onset correctly identified. Specificity = percentage of episodes distant from AF onset properly classified.
R. Alcaraz, J.J. Rieta / Biomedical Signal Processing and Control 5 (2010) 114 11
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premature atrial complexes not followed by a regular RR interval
reached a sensitivity of 89% and specificity of 91%.
Finally, some works considered the possible relationship
between AA and VA prior to AF onset [112]. To this respect, a
proposed method was basedon a combination of techniques which
assess autonomic tone (through HRV) and atrial ectopic beat
occurrence. Depending on whether there is a significant correla-
tion between observed low-frequency and high-frequency spectral
power in the RR power spectral density, HRV or premature atrial
complexes analysis was considered. Precisely, If there is high
correlation, a discriminant analysis based on spectral features of
HRV was used to predict AF onset, whereas in the low-correlation
case, atrial premature contractions are also added to the
discriminant model. However, this method was characterized by
a notably low sensitivity, although it was robust in the presence of
no episodes. Other work presented a modular classification
algorithm based on the nearest K-neighbors and parameters
related to both the P wave and the QRS complex [113]. Thus, some
analyzed metrics were QR voltage amplitude, RR interval,
amplitude and time width of P wave, time distance between P
wave and R peak, etc. Making use of a forward stepwise approach
to maximize classification performance, this method provided a
sensitivity of 96% and specificity of 88%.
7. Conclusions
The present review has shown the applications of sample
entropy to the electrocardiogram of atrial fibrillation. Regarding
atrial activity, SampEn has demonstrated to be a robust organiza-
tion estimator able to provide information about several aspects of
the arrhythmia. In this respect, clinical relevant information
related to spontaneous AF termination, to the organization time
course variation in the onset and termination of AF and to sinus
rhythm maintenance after electrical cardioversion, are some of its
applications. On the other hand, SampEn can also play an
important role in the ventricular activity analysis of AF, thus,
being able to reflect cardiovascular autonomic regulation changes
in the instants preceding AF onset. The studies summarized in thepresent work suggest that sample entropy can be considered as a
useful non-linear metric to quantify accurately atrial and
ventricular cardiac dynamics from the surface ECG in atrial
fibrillation.
Acknowledgements
This work was supported by the projects TEC200764884 from
the Spanish Ministry of Science and Innovation, PII2C09-0224-
5983 from Junta de Comunidades de Castilla La Mancha and PAID
0508 from Universidad Politecnica de Valencia.
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