Bioinformatics ProgrammingEE, NCKU

Tien-Hao Chang (Darby Chang)

TodayQuestions& Answers

Q1How long is today’s class?

Soon

Q2 Is there any exams?

No!

But

You have 1 or 2 projects

Q3Is there any exercise?

Yes!Unfortunately, and …

You got a lot

How many?1 programming exercise every week

That’s it1 or 2 projects

1 programming exercise every week

冏 rz

Any Questions?

RememberYou are welcome to interrupt me, anytime!

Q4 Requirements?

Biology (basic)Programming (basic)

Q5What is Bioinformatics programming?

Just programming to solve biomedical problems

Some examples

Cancel cell

http://repairstemcell.files.wordpress.com/2009/05/breast-cancer-cell2.jpg

We wantFigure out why they didn’t die?

We canCompare them to normal cell

(compare the containing molecules such as proteins)

Protein representation

http://genome.ukm.my/images/content%20images/bioinformatics%20laboratory.gif

© http://repairstemcell.files.wordpress.com/2009/05/breast-cancer-cell2.jpg

EngineersDesign representations

(map to similar informatics problems)

Q6 Textbook?

Beginning Perl for Bioinformatics

http://covers.oreilly.com/images/9780596000806/lrg.jpg

生物資訊學電腦技術(Developing Bioinformatics Computer Skills)

http://www.flytownbooks.com/itempic/A116.gif

Perl 學習手冊(Learning Perl)

http://images.sunfar.com.tw/jpg200/902/902840YF10.jpg

TextbookNot necessary

Q7How to get information about this class?

Contact medarby@ee.ncku.edu.tw

Office: 92693#62421

Homepagehttp://zoro.ee.ncku.edu.tw/bp/

(easy to remember)

索隆 .成大電機 /生物資訊程式設計zoro.ee.ncku.edu.tw/pb

http://www.ttv.com.tw/drama/2005/cartoon/onepeace/images/cast/05.gif

Any Questions?

Summary1 or 2 projects + many exercises

http://zoro.ee.ncku.edu.tw/pb/