BioAcknowledgement• BioScientists and BioStudents who do

science as it is fun and for the sake of it.

• People who support science

• Korean MOST for funding

• Korean MIC for funding (KADO project)

• KRIBB for supporting KOBIC

• KOBIC colleagues

• Dr. Tan Tin Wee and INCOB2007 organizers

Evaluation: 3rd BioWiki contest

Jong Bhak

Korean Bioinformation Center

KRIBB

Korea

http://www.kobic.kr/

BioDisclaimer 3/3

•Everything here is under

(B) BioLicense

http://biolicense.org/

Keyword change in bioinformatics:

• Structure• Sequence

• Large scale• Internet• Interaction & Network• Omics

• Sharing and Communication: – information and project sharing– Collaboration, integration (Bio- projects)– GRID, E-Science, Cyber-infrastructure

• Entrepreneursihp & Industrialization

The tide of time 2/2

–Bioinformation and Bioknowledge must openfree

for maximum creativity and entrepreneurship

Web 2.0Bio 2.0

Introducing BioCC• BioCC: Bio Community Cluster

• Building a virtual community of bioknowledge.

– Making and providing bioknowledge chart that are openfree, comprehensive, and easy to access.

Philosophy of BioCC

• Openfreely

Sharing

data, information, knowledge

Collaboration through infrastructure

Attitude

• “If I’m not the first author, I’m gonna take all my marbles and go home.”

BioWiki• A method of constructing UCC

bioinformation universe.

• BioWiki is a web site name

• BioWiki is also a program based on

Mediawiki Biowiki-2.5 (2007)

• http://biowiki.net/

BioPortal using BioWiki -  BioMatrix  Biopipeline, BioEngine  BioPortal.NET   BioPortal using BioWiki -  BioMatrix  Biopipeline, BioEngine  BioPortal.NET  

BBiiooPortal.NETPortal.NET

Biowiki contest

1st BioCC BioWiki contest

• 2007 January -> • 2007 February

KOBICBioCC System

도메인 분 야

http://biome.info 생명공학 대중화를 위한 컨텐츠

http://bioprograms.net 생명과학에 필요한 프로그램 스크립트 제공서비스

http://proteinfunction.net 단백질 기능예측

http://biolive.org 생명기원에 대한 가설정리 및 문제 해결방안

http://biopicture.net 생명과학 분야 형광이미지

http://evolomics.net 해조류의 생태 및 계통 ( 진화 )

http://biovideo.org 생명과학 교육 동영상 서비스 (UCC)

http://contactome.org 감염질환 관련 지표물질의 생물학적인 정보구축

http://pharmanome.org 바이오 의약에 관한 국내 /외 동향

http://diseasepedia.net 심혈관 및 동맥경화에 관련된 논문 , 뉴스 공유

http://biozine.org 분자생물학 , 조직학 , 면역학 관련 컨텐츠

http://biocafe.net 생물학적 난제가 무엇이 있는지 그리고 이를 해결하기 위한 공유의 장

http://expressome.org 생물통계관련 분석절차 , 마이크로어레이

http://networkbiology.org Biology Network 들의 개념 및 참고문헌 , 연구자 , 연구기관분류

http://primatome.org 영장류 분류 , 형태 , 행동 및 생태자료

http://koreansnp.org 질환관련 SNP 정의 , 분석방법

http://stemcellbiology.net 줄기세포 연구방법

ResultsResultsResultsResults

   참가자 대표 : 안용열

소 속 : KAIST

   연락처 : 016-423-4278 / yongyeol@gmail.com

   팀원이름 : 이상훈 , 손승우

주제 : Biology network 들의 개념및 참고문헌

연구자 , 연구기관분류

Wiki URL : http://networkbiology.org

1st : http://networkbiology.org Network Biology

2nd : http://expressome.org 생물통계관련 분석절차 , 마이크로어레이

http://pharmanome.org 바이오 의약에 관한 국내 /외 동향

3rd : http://proteinfunction.net Protein Structure and function

http://biozine.org 분자생물학 , 조직학 ,

면역학 관련 Contents

http://stemcellbiology.net Stem Cell Biology

http://biome.info 생명공학 대중화를 위한 컨텐츠 http://contactome.org 감염질환 지표물질의 생물학적인

정보구축

Total 8 teams

Winner

2nd International Biowiki contest

•17 teams participated in it.•Winner: http://biodatabase.org/– Dan Bolser at MPI Berlin

3rd International BioWiki contest

• July 20th to Aug 24th

• Now Open to everyone(teams)• Tools: Biowiki program or Mediawiki• Contestants can pick subject/title and

we provide them with wiki servers.– E.g.: http://biowiki.net/Studentomics

• 1st winner: $500• 2nd place : $300• 3rd places: $200

General Rules of BioWiki • 1. All the information is openfree (copyLefted) and shared

Under BioLicense (http://biolicense.org)

• 2. Good biowiki is the one that

acquires much amount of information and number of users

• 3. Biowiki sites must be easy to use

Biowiki Evaluation

Aug 27th: International experts will evaluate the submitted openhypertext(wiki) sites during the 6th InCoB at Hong Kong.

Aug 27th: Popularity evaluation Anyone who attends Incob2007 can cast a popularity

vote by typing(signing) in their names in Biowiki.net

http://biowiki.net/

BioPipeline Popular Evaluation

•http://biopipe.net/