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Bacterial Physiology (Micr430). Lecture 8 Macromolecular Synthesis and Processing: Proteins (Text Chapter: 10). PROTEIN SYNTHESIS. Also termed translation A triplet code specifies for an amino acid There may be more than one code for a particular amino acid (degeneracy) - PowerPoint PPT Presentation
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Bacterial Physiology (Micr430)
Lecture 8Macromolecular Synthesis and
Processing: Proteins
(Text Chapter: 10)
PROTEIN SYNTHESIS Also termed translation A triplet code specifies for an amino acid There may be more than one code for a
particular amino acid (degeneracy) Among 64 combinations of four bases,
three (UAG, UAA and UGA) do not encode any amino acid - nonsense codons
Transfer RNA tRNA possesses anticodon that
complements a specific codon on mRNA It has a specific amino acid attachment
site for binding a particular amino acid It has a ribosome recognition site It consists of about 80 nucleotides,
many of which are of unusual nucleotides
Charging of tRNA
Fig. 10.32
Composition of ribosome
Initiation of Protein Synthesis
In the absence of mRNA, 30S and 50S subunits remain separated, ensured by the activity of initiation factors 1 and 3 (IF-1 and IF-3) associated with 30S.
If mRNA is present, IF-3 binds to mRNA and thus brings mRNA and 30S together.
The Shine-Dalgarno sequence on mRNA will pair with a region located at the 3’ end of 16S rRNA
Initiation of Protein Synthesis
Next, cytosolic initiator factor 2 (IF-2) complexes with GTP and initiator tRNA (fMet-tRNA)
IF-2 directs binding of fMet-tRNA to P site within 30S subunit, permitting the association of 30S and 50S subunits
IF-3 is then removed from the complex
Initiation Complex
Formation
Fig. 10.33
Elongation of Protein Synthesis
Elongation factor Tu shuttles proper aa-tRNA into the A site, forming anticodon:codon match
The peptide bond is formed between the incoming aa and the C terminal of the elongated polypeptide, catalyzed by a ribozyme located on 50S subunit
Growing peptide bound to tRNA on A site is moved to the P site with help by Elongation factor G and GTP
Elongation Fig. 10.35
Termination When translocation brings one of the
termination codons into the A site, the ribosome will bind one of the two peptide release factors (RF-1 and RF-2)
The release factor will activate peptidyl transferase, hydrolyzing the bond joining polypeptide to the tRNA at P site.
Ribosome disassembles and recycle to another round of protein synthesis
Termination Fig. 10.35