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Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

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Page 1: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design
Page 2: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Background

Page 3: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Background

Page 4: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Background

Page 5: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Background

Page 6: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Museum! Museum!

Task

Design

Page 7: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

step1:Define the city step2:Build a database for the city

Design

Page 8: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Design

How to build a bio-database

Page 9: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Design

Specific enzyme cutting sites

Page 10: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

step4:Find every possible way

step5 : Find best way

step3:Choose the data

Design

Page 11: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

1 2 3 4 5 6 7 8

Choosen City library

Choosen Path library

Design

How to find every possible routes?

Page 12: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Electrophoresis

DNA sequencing

Design

Obtain the specific results of pathway

Page 13: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Design

Bio-CPU

Page 14: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Design

Logical principles

Page 15: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

BBa_K1341000

Design

Logical principles

Page 16: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

BBa_K091101

The x and y axes form a grid of 36 pairs of inducer concentrations. The concentrations tested were 0, 1, 10, 50, 100, and

200 ng/mL for aTC and 0, 0.001, 0.002, 0.005,0.010, 0.100, and 1.000mM for IPTG behavior is depicted 6 h after

induction.

BBa_K1341000

Design

The advantage of LTT promoter

Page 17: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

BBa_K1341001

No.5 Without

No.5

Fluorescenc

e output

1 0

Design

Step 1

Page 18: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

No.5 N0.5&No.8

Fluorescence

output

1 0

Design

Step 2

Page 19: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

No.5&N0.2&N0.8 N0.5&No.8

Fluorescence

output

0 0

Design

Step 3

Page 20: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Conditions are ±100 ng/mL aTc and ±1mM IPTG, All data is obtained 6 h after induction.

Fluorescence

output

No.5&N0.2&N0.8 N0.5&

No.8

N0.5&

No.2

Add IPTG 0(green) 1 0

Add aTc 1(red) 0 1

Design

Why add IPTG first?

Page 21: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Add IPTG No.5&N0.2&N0.8 N0.5&No.8

Fluorescence

output

0 1

Design

Step 4

Page 22: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Add

aTc

No.5&N0.2&N0.8

Fluorescence

output

1

The x and y axes form a grid of 36 pairs

of inducer concentrations. Behavior is

depicted 6 h after induction.

Design

Step 5

Page 23: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Result

Result of DNA sequencing

Page 24: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

1

2 4

5

36 8

7

Result

Route:2-4-5-7-8 is the right result!

Page 25: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Human Practice&Help each other

Page 26: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

College freshmen

“5089 college freshmen”

Human Practice

Page 27: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Human Practice

Military Training

Page 28: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Established community

Human Practice

Page 29: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Sina Blog APP

Human Practice

Page 30: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

CCiC(Central China iGEMers' Consortium)

Human Practice

Page 31: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Help Each Other

Communicate with Central China iGEMers' Consortium:

BNU-China CAU_China HUST-China,

HZAU-China Jilin_China LZU-China,

NJU-QIBEBT NUDT_CHINA OUC-China,

Peking SCAU-China,SCUT WHU-China WHU-Pharm

Repair the debug of iGEM biobrick library:

WHU-China

WHU-Pharm

The questionnaire survey:

ETH Zurich HZAU-China LZU-China

BIT,SCUT BGU_Israel Michigan

Page 32: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design
Page 33: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Achievements

Submit 2 well document biobricks LTT GFP switch device:BBa_K1341000 Path way test system:BBa_K1341001Work as expected

Characterization of an existingBioBrickTTL promoter :BBa_K091101

Solving a bio-navigational probelm

Safety training

Attribute work done by the students .

Help registered iGEM team from another school.

Human practice

Page 34: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Thank you for listening!

Page 35: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

P45: control plasmid copy number

Relative fluorescence: GFP/luciferase

Page 36: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

WIKI

Page 37: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Project

Page 38: Background - Main Page - 2014.igem.org2014.igem.org/files/presentation/AHUT_China_Championship.pdf · Background. Background. Background. Background. Museum! Museum! Task Design

Hierarchical Communication System

Future work