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1 Assessment of OmpATb as a novel antigen for the diagnosis of bovine tuberculosis 1 2 Irene Schiller 1 , H. Martin Vordermeier 2 , W. Ray Waters 3 , Mitchell Palmer 3 , Tyler Thacker 3 , 3 Adam Whelan 2 , Roland Hardegger 1 , Beatrice Marg-Haufe 1 , Alex Raeber 1 , Bruno Oesch 1* 4 5 Prionics AG, Schlieren, Switzerland 1 , Veterinary Laboratory Agency, Addlestone, Great 6 Britain 2 , and National Animal Disease Center, Agricultural Research Service, US Department 7 of Agriculture, Ames, IA, USA 3 8 9 10 11 12 13 14 15 16 * Corresponding author. Mailing address: Prionics AG, Wagistrasse 27A, CH-8952 17 Schlieren, Switzerland. Phone: +41 44 200 2014. Fax +41 44 200 2010. E-mail: 18 [email protected] 19 20 Copyright © 2009, American Society for Microbiology and/or the Listed Authors/Institutions. All Rights Reserved. Clin. Vaccine Immunol. doi:10.1128/CVI.00151-09 CVI Accepts, published online ahead of print on 8 July 2009 on February 7, 2018 by guest http://cvi.asm.org/ Downloaded from

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Page 1: Assessment of OmpATb as a novel antigen for the diagnosis of

1

Assessment of OmpATb as a novel antigen for the diagnosis of bovine tuberculosis 1

2

Irene Schiller1, H. Martin Vordermeier2, W. Ray Waters3, Mitchell Palmer3, Tyler Thacker3, 3

Adam Whelan2, Roland Hardegger1, Beatrice Marg-Haufe1, Alex Raeber1, Bruno Oesch1* 4

5

Prionics AG, Schlieren, Switzerland1, Veterinary Laboratory Agency, Addlestone, Great 6

Britain2, and National Animal Disease Center, Agricultural Research Service, US Department 7

of Agriculture, Ames, IA, USA3 8

9

10

11

12

13

14

15

16

* Corresponding author. Mailing address: Prionics AG, Wagistrasse 27A, CH-8952 17

Schlieren, Switzerland. Phone: +41 44 200 2014. Fax +41 44 200 2010. E-mail: 18

[email protected] 19

20

Copyright © 2009, American Society for Microbiology and/or the Listed Authors/Institutions. All Rights Reserved.Clin. Vaccine Immunol. doi:10.1128/CVI.00151-09 CVI Accepts, published online ahead of print on 8 July 2009

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ABSTRACT 21

In search for better tools to control bovine tuberculosis, the development of diagnostic 22

tests with improved specificity and sensitivity has a high priority. We chose to search for 23

novel immunodiagnostic reagents. In this study, Rv0899 (Outer membrane protein A of 24

Mycobacterium tuberculosis, OmpATb) was evaluated as a stimulation antigen in a IFN-γ 25

release assay to diagnose bovine tuberculosis. OmpATb induced IFN-γ responses in cattle 26

experimentally infected with M. bovis as early and as persistently as ESAT-6 and CFP-10, 27

the current lead diagnostic antigens. In naturally infected cattle, OmpATb stimulated IFN-γ 28

production in 22 of 26 animals (85%). Importantly, OmpATb detected a portion of M. bovis-29

infected cattle which did not respond to ESAT-6 and CFP-10 (5 of 6 cattle). The combined 30

diagnostic sensitivity of OmpATb, ESAT-6 and CFP-10 in a pre-selected group consisting of 31

naturally TB-infected cattle with an overrepresentation of ESAT-6/CFP-10 non-responsers 32

was 96% (25 of 26 animals). Specificity of OmpATb in uninfected cattle was 100% (27 cattle 33

tested, 12 of them reacted false positive with tuberculins). In summary, our results indicate 34

that OmpATb has the potential to enhance the sensitivity of previously described diagnostic 35

tests based on ESAT-6 and CFP-10, and that the combined use of OmpATb, ESAT-6, CFP-36

10 and other proteins may achieve at least equal sensitivity than PPDs yet, at higher 37

specificity. Further studies evaluating the diagnostic performance of OmpATb in combination 38

with other proteins are ongoing. 39

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40

INTRODUCTION 41

Mycobacterium bovis, the causative agent of bovine tuberculosis (bTB), is also 42

responsible for a proportion of human TB cases. Thus, infection of cattle with M. bovis 43

constitutes both a human health hazard and an animal welfare problem with economic 44

implications in terms of trade restrictions, productivity losses and massive annual expenditure 45

on bTB eradication programs. The control of bTB is mainly based on a test and slaughter 46

policy. The persistence of this zoonotic disease combined with the loss of trade and the 47

exponential costs for control justify a need not only for more sensitive but also for more 48

specific diagnostic assays. The occurrence of false positive results can be attributed, at least 49

in part, to the fact that immune responses to purified protein derivative (PPD) are not only 50

present in TB-infected animals but also animals exposed to environmental mycobacteria 51

(reviewed by 29). PPDs are prepared by precipitation from heat-killed cultures of 52

mycobacteria and are poorly defined, complex antigens containing many proteins, some of 53

them shared by different mycobacterial species or even other bacteria. Co-infection of cattle 54

with M. bovis and M. avium ssp. paratuberculosis has been reported not only to coincide with 55

increased numbers of false positives in PPD-based diagnostic assays, but also with 56

increased frequency of false negatives due to a general depression of cell mediated immune 57

response to PPDs in advanced paratuberculosis (4, 5, 6, 20). 58

The BOVIGAM® interferon (IFN) -γ assay (47) is being incorporated into bTB eradication 59

programs in many countries (42). Increased sensitivity compared to the skin test, possibility 60

of more rapid repeat testing, no need for a second visit to the farm and more objective test 61

procedure and interpretation are main benefits of the IFN-γ assay recognized by authorities, 62

veterinarians and farmers (34, 42). In areas of low TB prevalence, concerns exist about 63

Bovigam specificity, as well as for skin test (22, 25, 27, 29). Study results are divergent; 64

Cagiola and colleagues (11) found a lower specificity of single comparative cervical skin test 65

compared to those of the IFN-γ assay. Regardless, the identification of individual 66

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mycobacterial antigens which allow the replacement of PPDs in diagnostic tests has been a 67

long-standing research goal. 68

Attempts to identify candidate antigens have led to the purification and characterization of 69

many proteins from M. bovis and M. tuberculosis. Based on a genomic approach, a great 70

variety of M. tuberculosis complex antigens have been screened for immunogenicity. ESAT-6 71

and CFP-10 have been shown to be outstanding diagnostic target proteins in the whole blood 72

IFN-γ assay for cattle (1, 2, 10, 14, 18, 29, 40, 41, 45) and for humans (3, 8, 15, 17). These 73

proteins have been considered to be particularly interesting because their genes are absent 74

from M. bovis BCG, thus allowing a differentiation between infected and vaccinated 75

individuals. Cockle and colleagues (14) identified a peptide cocktail comprising peptides from 76

ESAT-6 and CFP-10 together with peptides from Rv3873, Rv3879c, Rv0288 and Rv3019c 77

which was significantly better than tuberculin for identifying skin test-negative animals with 78

confirmed bTB. In addition, the specificity of this cocktail was not compromised by M. bovis 79

BCG vaccination. Rv3615c represents another antigen stimulating an IFN-γ response in a 80

significant proportion of M. bovis-infected cattle (37%) but not in BCG-vaccinated animals 81

(37). Vaccination has particular application in countries which cannot afford the traditional 82

test-and slaughter control approach. However, a precondition for the use of TB vaccines in 83

cattle would be the availability of diagnostic tests to differentiate M. bovis-infected from 84

vaccinated cattle (reviewed by 30). 85

The use of individual mycobacterial antigens has enhanced the specificity of the IFN-γ 86

assay, but reduced its sensitivity (10, 29, reviewed in 42). A wider range of antigens is 87

therefore needed for improving specificity while keeping the sensitivity of the standard (PPD 88

based) IFN-γ assay. 89

The objective of this study was to evaluate the potential of Rv0899 (Outer membrane 90

protein A of M. tuberculosis, OmpATb) respectively of Mb0923, the M. bovis related protein 91

with identical sequence, as diagnostic target for bTB. OmpATb belongs to the OmpA family 92

of outer membrane proteins. OmpATb is a pore-forming protein (36) with functional 93

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properties of a porin which enables the bacteria to respond to reduced environmental pH 94

(32). In chlamydia, gram-negative intracellular bacteria, the major outer membrane protein 95

(MOMP) functions also as a porin (38) and MOMP possesses serotype-, subspecies-, 96

species-, and genus-specific antigenic determinants (16, 35). Its gene, ompA, has been used 97

as basis of a taxonomic classification of chlamydia (21). MOMP in chlamydia is known to 98

elicit both humoral and cell mediated immune responses: The protein provides a useful 99

species-specific serodiagnostic antigen (19) and it has been shown to act successfully as a 100

vaccine (23). To our knowledge, the usefulness of OmpATb for bTB diagnostics has so far 101

not yet been evaluated. 102

We herein describe the assessment of OmpATb as a novel antigen in the whole blood 103

IFN-γ assay for detection of tuberculous cattle. Our data show that OmpATb is immunogenic 104

and elicits an IFN-γ response in M. bovis-infected cattle as early and as persistently as 105

ESAT-6 and CFP-10. Importantly, OmpATb detected a proportion of M. bovis-infected cattle 106

which did not respond to ESAT-6 and CFP-10. We suggest that this antigen has the potential 107

to enhance the sensitivity of previously described diagnostic tests based on ESAT-6 and 108

CFP-10. 109

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MATERIALS AND METHODS 110

Antigens. Bovine (PPD B) and avian (PPD A) tuberculins were supplied by Prionics AG, 111

Schlieren, Switzerland, and by the Tuberculin Production Unit at the Veterinary Laboratories 112

Agency, Weybridge, Surrey, United Kingdom. They were used to stimulate whole blood at 20 113

µg/ml (Prionics PPDs) and 10 µg/ml (Weybridge PPDs). 114

OmpATb and maltose binding protein (MBP) were obtained from a commercial source 115

(Proteix, Prague, Czech Republic). A truncated OmpATb protein lacking its N-terminal 72 116

residues (OmpATb73-326) was produced according to Senaratne et al. (36) as a fusion protein 117

with the MBP. After synthetic gene synthesis, DNA fragments were inserted into BstBI site of 118

pET28b-MaIE expression vector at the C-terminus of MaIE protein. Large-scale production 119

was performed in E. coli BL24 lambda DE3. Recombinant ESAT-6:CFP-10 fusion protein 120

(rE:C) was received as kind gift from Dr. F. C. Minion, Iowa State University, USA and has 121

been produced as described by Waters et al. (45). All recombinant proteins were used at a 122

concentration of 5µg/ml in whole blood culture. 123

A set of 34 overlapping peptides covering the complete sequence of Rv0899 (OmpATb) 124

except its amino-terminal signal sequence, 20 residues long and overlapping by 12 residues, 125

were designed (Fig. 1) and single peptides were used at a final concentration of 25 µg/ml; 126

whereas, in a pool, each peptide had a concentration of 10µg/ml. Further peptides between 127

16 and 20 amino acids in length were synthesized and formulated into an ESAT-6 / CFP-10 128

peptide cocktail (E/C) as described previously (13) and used at a concentration of 129

5µg/ml/peptide. All peptides were produced by a commercial manufacturer (Pepscan 130

Systems B.V., Lelystad, The Netherlands). Pokeweed mitogen (PWM, Sigma) and 131

staphylococcal enterotoxin B from Staphylococcal aureus (SEB, Sigma) were included as 132

positive controls at 5 µg/ml (PWM) and at 1 µg/ml (SEB). 133

Cattle. Male, TB-free, Holstein-Friesian calves were housed according to institutional 134

guidelines at the National Animal Disease Center, Ames, Iowa (NADC) in a biosafety level 3 135

(BL-3) facility. All animal care and use procedures were reviewed and approved by the 136

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NADC Animal Care and Use Committee. Calves received M. bovis strain 95-1315 by aerosol 137

at 6 months of age as described previously (44). Blood samples were taken repeatedly 138

during 4 months post-infection. Cattle naturally infected with M. bovis were obtained from 139

herds with a history of bTB, as determined by the State Veterinary Service, United Kingdom. 140

Single intradermal comparative cervical tuberculin test (SICCT) – positive reactors were kept 141

at the Veterinary Laboratories Agency (VLA) Weybridge Animal Units, United Kingdom. 142

Animal experiments at VLA were undertaken under a licence granted by the UK Home Office 143

that was obtained after approval by the local ethical review committee. The animals were 144

predominantly Holstein-Friesians and all older than 12 months of age. TB was confirmed in 145

all animals by post mortem analysis including culture. 146

Uninfected control animals were obtained from herds free of bTB in Great Britain and 147

Switzerland. Please refer also to Table 1 for an overview of the animal groups and 148

experiments performed during this study. 149

Interferon-gamma (IFN-γγγγ) assay. Whole blood cultures were performed in 96-well plates 150

by mixing 0.25 ml of heparinized blood with 25 µl of antigen-containing solution. For OmpA 151

Tb peptide experiments, aliquots of 0.1 ml of blood were mixed with an equal volume of 152

antigen-containing solution. Supernatants were harvested after 24 h of culture at 37°C and 153

5% CO2. OmpATb peptide stimulated cultures were incubated for 40 hrs and IFN-γ 154

concentration determined using the BOVIGAM® ELISA kit (Prionics AG, Schlieren, 155

Switzerland). Optical density was determined at 450 nm (OD450). Only samples with 156

unstimulated (NIL) OD450 of < 0.2 and PWM/SEB stimulated OD450 of > 0. 5 were considered 157

valid for analysis. A result was considered positive if the PPD B OD 450 minus PPD A OD 450 158

was ≥ 0.1, and the PPD B OD 450 minus the unstimulated OD 450 was ≥ 0.1. For recombinant 159

antigens, stimulated OD 450 minus unstimulated OD 450 of ≥ 0.1 was considered positive. 160

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161

RESULTS 162

Immunoreactivity of recombinant OmpATb. 163

Whole blood of experimentally infected animals was stimulated with PPDs, recombinant 164

OmpA (rOmpATb), or a recombinant fusion protein of ESAT-6 and CFP-10 (rE:C) at 9, 14, or 165

29 dpi. Positive diagnoses in response to rOmpATb and rE:C started at day 14 (5 of 5 166

animals with rOmpATb, and 2 of 5 with rE:C). At 29 dpi, all animals were detected with both 167

rOmpATb and rE:C (at that time point, only samples from 4 animals were valid for analysis, 168

as one animal had a markedly elevated background value of OD450 2.5). The IFN-γ response 169

to these antigens persisted at all time points tested later (2 to 4 months post inoculation, 170

results not shown). In contrast to the defined antigens, PPD stimulation resulted in only one 171

positive diagnosis at day 29 (animal number 6, Fig. 2) while all animals were negative 9 and 172

14 dpi. Detailed analysis of the IFN-γ production showed that the animals responded also to 173

PPDs starting at day 14, but the response to PPD A was mostly stronger than to PPD B and 174

therefore resulted in a negative diagnosis. 175

IFN-γ responses in cattle naturally infected with M. bovis and in uninfected cattle are 176

summarized in Table 2. OmpATb elicited IFN-γ production in 22 of 26 M. bovis-infected cattle 177

(85%), 5 of these 22 animals did not respond to a peptide cocktail of ESAT 6 and CFP 10 178

(E/C). 20 of 26 M. bovis-infected cattle (77%) responded to E/C, 3 of these 20 cattle did not 179

respond to rOmpATb. The combined diagnostic sensitivity of E/C and rOmpATb in this pre-180

selected group was 96% (25 of 26 animals). This experiment does not represent sensitivity 181

under normal field conditions, as the group of animals in this experiment is biased by the goal 182

to test a large portion of E/C non-responders. In fact, field studies have shown that E/C alone 183

has a sensitivity of 81% (Vordermeier and Ewer, unpublished data), as opposed to 77% in 184

our study. Similarly, a diagnostic field sensitivity of E/C combined with OmpATb would be 185

expected to be higher than the sensitivity achieved in our pre-selected group. 186

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Three of 7 uninfected animals were false positive with PPD, as compared to no false 187

positives with E/C or rOmpATb, indicating the potential for increased diagnostic specificity of 188

these antigens compared to PPDs. 189

Recombinant OmpATb had been used as a fusion protein with maltose binding protein 190

(MBP). As a control we included whole blood stimulation with MBP alone. MBP induced no 191

IFN-γ production in all but one assay: One of the experimentally infected animals had an 192

elevated reaction to MBP at 29 dpi (OD=0.919). The corresponding OD value for rOmpATb 193

was 3.842 suggesting additional reactivity to the OmpATb part of the fusion protein. 194

Immunoreactivity of OmpATb peptides. Peptide mapping for the selection of 195

immunoreactive OmpATb peptides was done by screening the responses to a panel of 196

overlapping peptides in 10 animals naturally infected with M. bovis. IFN-γ production to 197

individual peptides was found in 4 of the 10 animals. Fig. 3 shows a comparison of the 198

responder frequency and of the mean relative IFN-γ response (∆OD450 = OD450 with peptide 199

minus OD450 without peptide) of the peptides in these 4 animals. The criterion used for the 200

determination of the responder frequency was: Response = ∆OD450 > 0.05. Peptides 1, 3 and 201

9 were recognized by 75% of these animals and peptides 2, 22, 25, 26, 28 and 32 by 50%. 202

Lower response frequencies of 25% were found after stimulation with peptides 6, 7, 10 to 15, 203

17, 18, 20, 27, 29 and 33. We did not detect any IFN-γ responses to OmpA peptides in the 204

uninfected cattle, except with peptides 12 and 25 in one animal each. Based on the 205

responses with individual peptides, a peptide pool consisting of peptides 1, 3, 9, 27 and 32 206

was formulated and used to stimulate blood from 18 naturally infected and 20 uninfected 207

cattle. Peptides were chosen based on the following criteria: responder frequency of at least 208

75% and/or an IFN-γ response of at least 0.1 (∆OD450) in individual animals and no reaction 209

in negative animals. Responses to the peptide pool were detected in 5 of 18 animals (28%) 210

based on a cutoff ∆OD450 > 0.1, and in 9 out of 18 animals (50%) using the cutoff ∆OD450 > 211

0.05. None of the 20 uninfected cattle showed a response to the OmpATb peptide pool (with 212

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either cutoff), as opposed to 9 of the 20 animals which were false positive with PPD 213

stimulation (Table 3). 214

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DISCUSSION 215

This paper describes that OmpATb specifically induces an IFN-γ response in M. bovis 216

infected cattle. The antigen represents a novel immunodiagnostic reagent, which has the 217

potential to complement ESAT-6 and CFP-10 in a diagnostic assay by markedly enhancing 218

sensitivity. In fact, this increase of sensitivity by OmpATb indicates that alternative antigens 219

(ESAT-6 / CFP-10 combined with OmpATb and further specific antigens) have the potential 220

to achieve a diagnostic sensitivity at least equal to that of PPDs. 221

In a pre-selected group consisting of naturally TB-infected cattle with an 222

overrepresentation of E/C non-responders, OmpATb combined with E/C had a sensitivity of 223

96%. OmpATb detected 83% of cattle not responding to E/C peptides suggesting that 224

OmpATb will complement the use of ESAT-6 and CFP-10. 225

Data obtained from experimentally infected animals showed that IFN-γ production induced 226

by OmpATb started 14 dpi, as early as those elicited by ESAT-6 and CFP-10. Early after 227

infection, the sensitivity obtained with the defined antigens was clearly higher than with PPDs 228

due to the fact that responses to avian tuberculin mostly exceeded those to bovine 229

tuberculin. In a further study we saw that this effect was less evident with lower PPD 230

concentrations (10 µg/ml), showing that the relative PPD response may be influenced by the 231

protein concentration and indicating the necessity to use balanced tuberculins (data not 232

shown). Regardless, increased sensitivity with alternative antigens compared to PPD might 233

not only account early after infection, but also in other conditions like superinfection with M. 234

avium ssp. paratuberculosis or other non-M. tuberculosis complex mycobacteria. 235

For bTB eradication programs, especially when they progress towards their completion, 236

highly specific diagnostic tests are needed resulting in fewer false positive reactors being 237

culled from herds and fewer herds falsely identified as bTB suspect. In addition, high 238

sensitivity is also crucial in order to identify residual infection. The IFN-γ assay is accepted to 239

be more sensitive compared to skin test (12, 34), thus indicating that it would be beneficial to 240

use the assay as primary screening test. Its level of specificity in regions with low incidence 241

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of bTB has been reported to be too low with the standard PPD-based assay; however, by 242

use of specific antigens, the assay may be adapted to provide a highly specific and sensitive 243

screening test, which could then be used as a stand-alone test or in conjunction with other 244

tests (9, 29). There has been a long search for antigens having the potential as diagnostic 245

markers in bTB (29, 10, 1, 14). In a recent study, Rv3615c stimulated responses in M. bovis-246

infected animals not responding to ESAT-6 and CFP-10 (4 of 7 animals). Diagnostics for bTB 247

require a panel of antigens; so far, no single antigen has been identified which could be used 248

as an efficient diagnostic immunoreagent. The cellular response to individual antigens is 249

known to vary between animals and to change over time during the course of infection. 250

These findings may be related to the turnover of mycobacterial growth in vivo (data 251

suggesting intervals of 5 to 7 weeks between peaks of cellular activity) or to the 252

sequestration of reactive clones resulting in periodical recognition in peripheral blood (33). 253

Similar mechanisms may also explain the one bTB-positive animal which was not detected 254

with the combination of OmpATb, ESAT-6 and CFP-10 in our study. This animal had been 255

repeatedly tested with the IFN-γ assay before our study: 5 months before sampling it reacted 256

positive with PPD and OmpATb, but negative with ESAT-6 and CFP-10, and 8 months before 257

sampling it was negative with the PPD-based IFN-γ assay (alternative antigens were not 258

tested at that time point). 259

In total, 85% (22 of 26) of naturally infected cattle reacted to recombinant OmpATb. 260

Unfortunately these animals were no longer available for testing with OmpATb peptides. With 261

a different group of naturally infected cattle, 28% (5 of 18, based on cutoff 0.1 OD450) or 50% 262

(9 of 18, based on cutoff 0.05 OD450) were positive with a OmpATb peptide pool. Changing 263

immunoreactivity to certain antigens over the course of an infection may be an explanation 264

for the lower percentage of animals detected with the OmpATb peptides compared to 265

OmpATb recombinant protein. In addition, BoLA class II recognition of some OmpATb 266

peptides restricted to certain BoLA haplotypes cannot be excluded and needs further 267

evaluation. Generally, synthetic peptides are not only strong inducers of cellular immune 268

responses in vivo, they are also suitable as in vitro diagnostic reagents in bTB (14, 28, 39, 269

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40). Compared to recombinant proteins, peptides offer the advantage that M. bovis specific 270

immunogenic regions of a protein can selectively be used and regions containing epitopes 271

cross-reacting with other bacteria can be omitted. 272

Specificity of rOmpATb in cattle free of bTB was 100% (7 cattle tested with rOmpATb, 20 273

cattle tested with OmpATb peptide pool). These animals were pre-selected on the basis that 274

a proportion of them had false positive reactions in a previous IFN-γ PPD-based test. During 275

our study, 12 of these 27 animals reacted false positive with PPDs, indicating superior 276

specificity of OmpATb compared to tuberculin. 277

Recombinant OmpATb has been constructed as a fusion protein with MBP. This tag 278

system has some advantages compared to 6xHis tagged system for the expression and 279

purification of recombinant proteins, such as increased solubility and no need for harsh 280

chemicals such as urea used for solubilization of eluted proteins. Disadvantages reported are 281

that the MBP affinity tag is more immunogenic and much larger (42 kDa) than the 282

polyhistidine tag (7). MBP may also have an impact on specificity, as the protein was 283

produced in an expression vector carrying a gene coding bacterial maltose binding protein 284

from E. coli K12, which is homologous to wild type E. coli. For this reason we added an 285

additional control in each assay by using MBP alone for stimulation. All but one animal (at 286

one time point during experimental infection) were negative with MBP. Further examination of 287

MBP reactivities in healthy cows kept in a Swiss farm showed that 43 out of 69 cattle were 288

MBP positive in the IFN-γ assay (data not shown). As indicated, this frequent reactivity of 289

MBP is most likely caused by cross-reaction with homologous E. coli proteins and it clearly 290

limits the use of the fusion protein for routine field diagnostics. 291

292

Specificity remains a great challenge in bTB diagnostics, as genes of M. tuberculosis 293

antigens occur also in some nontuberculous mycobacteria: genes for ESAT-6 and CFP-10 294

homologues are present in M. kansasii, M. gordonae, M. marinum, M. szulgai, M. flavescens 295

and M. gastri; genes for MPB83, TB10.4 and TB10.3 are found in M. kansasii. Cattle 296

infected/sensitized with M. kansasii may respond false positively to ESAT-6 and CFP-10 297

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recombinant protein and peptides (43, 46). Western blot analysis has suggested that the 298

presence of OmpATb is restricted to certain pathogenic species (M. tuberculosis, M. bovis, 299

M. microti), without being present in non-pathogenic mycobacteria like M. smegmatis, M. 300

chelonae, M. scrufolaceum, M. thermoresistibile, M. malmoense and M. kansasii (24). 301

BLAST search analysis showed that OmpATb shares 100% sequence identity with M. bovis 302

and 65% with M. ulcerans, however none with other mycobacteria. Significant sequence 303

similarity with other bacteria are restricted to the carboxy-terminal region. M. ulcerans causes 304

Buruli ulcer in humans, which is closely associated to tropical wetlands, especially in central 305

and west Africa. Natural infections in animals have been detected in Australian koalas, 306

ringtail possums, and captive alpacas (31). Bioinformatics can prioritize target genes for 307

subsequent immunological assays, however comparing sequence identity / homology alone 308

is not sufficient to predict species specificity. Biological evaluations are needed to 309

characterize species specificity, taking into account that some cross-reactivity may be 310

restricted to certain BoLA haplotypes (18, 43). The same holds true for cross-reactive 311

responses to BCG, which cannot be predicted alone from sequence data but require 312

biological evaluation (14). The fact that peptide sequences are derived from an ORF within 313

RD1 is not the only criterion deciding about cross-reactivity with BCG, other factors like less 314

appropriate presentation of proteins may be relevant for specificity and also for observed 315

differences between humans and cattle (26). In our study rOmpATb and the OmpATb 316

peptide pool were 100% specific in uninfected animals, but more data are needed to confirm 317

its diagnostic specificity. OmpATb is present in BCG (24), however it remains to be tested 318

whether a vaccination with BCG sensitizes cattle to OmpATb and would interfere with 319

OmpATb as diagnostic antigen. 320

All together, we suggest that OmpATb has the potential to enhance diagnosis by 321

increasing the sensitivity of diagnostic tests based on ESAT-6 and CFP-10. More important, 322

a substantial gain in sensitivity may be achieved by the addition of OmpATb. We are 323

confident that in combination with further antigens it will be feasible to create a peptide 324

cocktail leading to at least the same sensitivity than with PPDs. Further studies evaluating 325

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the diagnostic performance of OmpATb in combination with other proteins are ongoing. 326

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327

ACKNOWLEDGEMENTS 328

329

We thank Jessica Pollock, Rachel Huegel, Bart Olthof, and Mike Howard for excellent 330

technical support. We would also like to express our appreciation to the staff of the Animal 331

Service Unit at the VLA, the NADCand the ETH Forschungsanstalt Chamau. 332

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Sci. 49:46-49. 490

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491

TABLE 1. Summary of experiments and cattle groups 492

493

TABLE 2. Stimulation of IFN-γ responses with recombinant OmpATb and other antigens in 494

(A) cattle naturally infected with M. bovis and in (B) uninfected cattle 495

496

TABLE 3. Stimulation of IFN-γ responses with OmpATb peptides and PPDs in (A) cattle 497

naturally infected with M. bovis and in (B) uninfected cattle 498

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499

Fig. 1. Sequence of truncated Rv0899 (lacking its amino-terminal signal sequence) and 500

synthetic peptides. The positions of the synthetic peptides are shown in relation to the amino 501

acid sequence of Rv0899. Amino acid residues are given in the one-letter code. 502

503

FIG. 2 IFN-γ responses in cattle experimentally infected with M. bovis. Mean (+/- SEM) 504

∆OD450 values (PPD B minus PPD A at 20 µg/ml, rE:C minus NIL, rOmpATb minus NIL) at 505

14 dpi (A) and 29 dpi (B). Samples from animal 5 were invalid at 29 dpi due to a markedly 506

elevated Nil value (OD 2.5) indicating an increased level of circulating IFN-γ. 507

508

FIG. 3. Identification of immunoreactive OmpATb peptides recognised by T cells from M. 509

bovis infected cattle selected for reaction with OmpATb. (A) Responder frequencies in M. 510

bovis infected cattle (n=4, % of cattle tested that recognized a particular peptide). (B) Mean 511

IFN-γ responses after peptide stimulation in M. bovis infected cattle (n=4, ∆OD450 = OD450 512

with peptide minus OD450 without peptide). (C) Mean IFN-γ responses after peptide 513

stimulation in uninfected cattle (n=10, ∆OD450 = OD450 with peptide minus OD450 without 514

peptide). 515

516

517

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TABLE 1. Summary of experiments and cattle groups

Experiment Animal group Antigens in

IFN-γγγγ assay

Group

size

Location Cattle

breed

Age

Immunoreactivity

of rOmpATb

Cattle

experimentally

infected with M.

bovis. Blood

sampling was

performed 9, 14, 29

days and 2, 3, 4

months post

infection

PPDs

(Prionics),

rE:C,

rOmpATb

5 NADC Holstein-

Friesians

6 months

(at time of

infection)

Cattle naturally

infected with M.

bovis

PPDs

(Weybridge),

E/C peptides,

rOmpAtb

26 VLA Holstein-

Friesians

Older than

12 months

Uninfected cattle PPDs

(Weybridge),

E/C,

rOmpATb

7 VLA Holstein-

Friesians

Older than

12 months

Immunoreactivity

of individual

OmpATb

peptides

Cattle naturally

infected with M.

bovis

PPDs

(Weybridge),

OmpATb

peptides

10 VLA Holstein-

Friesians

Older than

12 months

Uninfected cattle PPDs

(Weybridge),

OmpATb

peptides

10 Prionics Holstein-

Friesians

and Swiss

Brown

From 2 to 9

years

Immunoreactivity

of OmpATb

peptide pool

Cattle naturally

infected with M.

bovis

PPDs

(Weybridge),

OmpATb

peptides

18 VLA Holstein-

Friesians

Older than

12 months

Uninfected cattle PPDs

(Weybridge),

OmpATb

peptides

20 Prionics Holstein-

Friesians

and Swiss

Brown

From 2 to 9

years

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TABLE 2. Stimulation of IFN-γ responses with recombinant OmpATb and other antigens in

(A) cattle naturally infected with M. bovis and in (B) uninfected cattle

(A) Infected cattle

No. positives (n / 26)

(B) Uninfected cattle

No. false positives (n / 7)

PPDs 26 3

E/C 20 (3 negative with rOmpATb) 0

rOmpATb 22 (5 negative with E/C) 0

E/C or rOmpATb 25 0

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TABLE 3. Stimulation of IFN-γ responses with OmpATb peptides and PPDs in (A) cattle

naturally infected with M. bovis and in (B) uninfected cattle

Antigen (A) No. positives (n / 18)

PPDs 18

OmpATb peptide pool, cutoff ∆ OD 450 > 0.1 5

OmpATb peptide pool, cutoff ∆ OD 450 > 0.05 9

(B) No. false positives (n / 20)

PPDs 9

OmpATb peptide pool, cutoff ∆ OD 450 > 0.1 0

OmpATb peptide pool, cutoff ∆ OD 450 > 0.05 0

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F E R P Q S V T G P T G V L P T L T P T S T R G A S A L S L S L L S I S R S G N T V T L I G D F P D E A A K A A L M T A L N G L L A P G V N V I D Q I H V D P V V R S L D F S S A E P V F T A S V P I P D F G L K V E R D T V T L T G T A P S S E H K D A V K R A A T S T WP D M K I V N N I E V T G Q

F E R P Q S V T G P T G V L P T L T P T

G P T G V L P T L T P T S T R G A S A L

L T P T S T R G A S A L S L S L L S I S

A S A L S L S L L S I S R S G N T V T L

L S I S R S G N T V T L I G D F P D E A

T V T L I G D F P D E A A K A A L M T A

P D E A A K A A L M T A L N G L L A P G

L M T A L N G L L A P G V N V I D Q I H

L A P G V N V I D Q I H V D P V V R S L

D Q I H V D P V V R S L D F S S A E P V

V R S L D F S S A E P V F T A S V P I P

A E P V F T A S V P I P D F G L K V E R

V P I P D F G L K V E R D T V T L T G T

K V E R D T V T L T G T A P S S E H K D

L T G T A P S S E H K D A V K R A A T S

E H K D A V K R A A T S T WP D M K I V

A A T S T WP D M K I V N N I E V T G Q

M K I V N N I E V T G Q A P P G P P A S G P C A D L Q S A I N A V T G G P I A F G N D G A S L I P A D Y E I L N R V A D K L K A C P D A R V T I N G Y T D N T G S E G I N I P L S A Q R A K I V A D Y L V A R G V A G D H I A T V G L G S V N P I A S N A T P E G R A K N R R V E I V V N

M K I V N N I E V T G Q A P P G P P A S

V T G Q A P P G P P A S G P C A D L Q S

P P A S G P C A D L Q S A I N A V T G G

D L Q S A I N A V T G G P I A F G N D G

V T G G P I A F G N D G A S L I P A D Y

G N D G A S L I P A D Y E I L N R V A D

P A D Y E I L N R V A D K L K A C P D A

R V A D K L K A C P D A R V T I N G Y T

C P D A R V T I N G Y T D N T G S E G I

N G Y T D N T G S E G I N I P L S A Q R

S E G I N I P L S A Q R A K I V A D Y L

S A Q R A K I V A D Y L V A R G V A G D

A D Y L V A R G V A G D H I A T V G L G

V A G D H I A T V G L G S V N P I A S N

V G L G S V N P I A S N A T P E G R A K

I A S N A T P E G R A K N R R V E I V V

G R A K N R R V E I V V N

5

6

7

8

1

2

3

4

13

14

15

16

9

10

11

12

24

25

26

27

28

17

18

19

20

21

22

23

33

34

29

30

31

32

Figure 1

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invalid

A

B

Figure 2

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0.00

0.02

0.04

0.06

0.08

0.10

0.12

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34

Me

an

∆O

D 4

50

nm

Peptide Number

A

0

10

20

30

40

50

60

70

80

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34

Re

sp

on

de

r F

req

ue

nc

y %

Peptide Number

B

C

0.00

0.02

0.04

0.06

0.08

0.10

0.12

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34

Me

an ∆

OD

45

0 n

m

Peptide Number

Figure 3

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