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Aquatic Gap Analysis and Biodiversity Management The AGAP Team: Kevin Kane, Co-PI AIT GIS Facility, ISU, [email protected] Clay Pierce, Co-PI Dept. Natural Resource Ecology and Management, ISU, [email protected] Patrick Brown, AGAP Web Interface AIT GIS Facility, ISU, [email protected] Robin McNeely, AGAP Hydrographic Base Layer AIT GIS Facility, ISU, [email protected] Anna Loan-Wilsey, Aquatic Habitat Biologist Dept. Natural Resource Ecology and Management, ISU, [email protected] Please visit the following web pages for more information about Aquatic Gap Analysis: IRIS and Aquatic GAP - maps.gis.iastate.edu/iris Iowa Gap Analysis - www.iowagap.iastate.edu National Gap Analysis - www.gap.uidaho.edu/gap Final Products / Credits: The Iowa Aquatic Gap Analysis Program will publish a final report explaining the biodiversity status of breeding fish species in the state. In conjunction with this biodiversity analysis, an atlas of fish species will also be published. The documents will be available on CD and on the Iowa Aquatic GAP website in Adobe Acrobat .pdf format. The GIS datasets used to create the stewardship and aquatic species layers will be available for downloading via ftp service. This same GIS data will be available for interactive viewing and querying over the Internet using ESRI’s Internet Map Server software. Credits: Iowa State University Iowa Dept. of Natural Resources Missouri Resource Assessment Partnership National Gap Analysis Program AGAP Cooperators: Iowa Aquatic Gap: Modeling Fish Distributions in Iowa Rivers Robin L. McNeely 2 , Anna K. Loan-Wilsey 1 , Patrick D. Brown 2 , Kevin L. Kane 2 , and Clay L. Pierce 3 1 Department of Natural Resource Ecology and Management, Iowa State University, Ames, Iowa; 2 GIS Facility, Iowa State University, Ames, Iowa; 3 USGS, Iowa State University, Ames, Iowa Accessibility of Information IRIS ArcIMS interface showing fish range (http://maps.gis.iastate.edu/iris) Aquatic GAP data users will have on- line, real time access to data through an ArcIMS map service and the ability to download data through FTP. Access via the internet map server will allow users to have the latest version of data without relying on updates to CDs plus the ability to analyze the data using GIS tools without the purchase of costly software. The Iowa Aquatic Gap dataset will be part of the IRIS IMS service. The web interface will include basic GIS functions, including the ability to query, classify, and select features. The site will also include report functionality for user selected fish species, river reaches or watersheds. August 4, 2004 Provide a standardized base layer for sample locational accuracy Characterize aquatic biodiversity throughout Iowa at the regional, watershed, and valley segment scales Identify the extent to which current management efforts are conserving aquatic biodiversity in Iowa at the regional, watershed, and valley segment scales Help to direct management, protection, restoration, and educational efforts within Iowa’s river resources Prioritize conservation efforts Provide easy accessibility to all information Aquatic Gap Goals Hydrographic Base Layer Aquatic GAP uses a modified version of the National Hydrography Dataset (NHD). The original dataset is a product of the collaboration between the USGS and the USEPA. http://nhd.usgs.gov The project area for Iowa encompasses 57 HUC level 8 watersheds. The individual watershed coverages were appended into one coverage and modified with Arc AML scripts provided by staff at the Missouri Resource Assessment Partnership (MoRAP) in Columbia, MO. E. Broadleaf Forest Aquatic Subregion Central Plains Aquatic Subregion The modified NHD coverage was sent to MoRAP for additional processing that resulted in a set of standard attributes being added to the coverage table. The Missouri Aquatic Gap modeling process had determined a recommended set of attributes and MoRAP generated these attributes for the Iowa coverage. The Iowa Aquatic Gap team will decide which of the available attributes will actually be used in the modeling process. The predictor variables under consideration for modeling inputs include stream flow, temperature, general size category, general downstream size category, soil or geology indicator, gradient category, stream maximum and minimum elevation and downstream size discrepancy category. Fish Community Database Objectives Create one database that would give electronic access to all historic riverine fish sampling data in Iowa Geographically link each community collection to the National Hydrography Dataset (NHD) and to appropriate Hydrologic Units using GIS Database Design AGAP staff either directly transferred or manually entered data obtained into a Microsoft Access relational database consisting of separate but related tables that contain three primary elements: information about the collector and collection, including IBI if available information about the location of each sample information about the species collected By using a unique numeric identifier for each sample, a direct relationship back to the original data is ensured, allowing other information not captured in our database to be retrieved by future investigators. Data Gathering Methods To be comprehensive in data gathering, several methods were used to locate riverine fish records. These strategies included: visiting 15 Iowa DNR offices and field stations across Iowa to acquire field notes and reports literature searches using bibliographies, print and electronic database indexes and abstracts, and library catalogs to acquire published literature, dissertations and government reports acquiring museum collection records through web-accessible database searches as well as direct contact with curators directly contacting individual fisheries investigators to acquire unpublished field notes Fish Database Summary Species Range Determination Preliminary fish ranges based on sample data were established at the HUC 8 level. Draft maps for all 157 species were sent to professional fish biologists in Iowa for review. Final range maps will be used to limit the predicted distribution of a species once the model is run to identify potential river reaches. Draft range map for Brook trout, Salvelinus fontinalis Predictive Distribution Modeling Process Predictive Distribution Models Use sampled reach values for predictor variables as input to decision tree. For each species, a statement will be created of values for each predictor variable. Predicted Distributions ArcMap will be used to select relevant values for each predictor variable per fish and the selected reaches will be the predicted distribution for that fish. Fish Community Database Data Collection Database Creation Shapefile Generation State Fish Species List Expert Review Species Point Distributions and Range Maps Plot Species Point Locations Assign species to HUC 8 Expert Review of Ranges Developing a Data Layer of Valley Segment Types Purpose Delineate distinct stream environments Serve as the backbone for analyzing conservation status of stream segments Protocol The Nature Conservancy’s Aquatic Community Classification Framework Based on ecoregions and watersheds aka EcoDrainage Units (EDUs) * River Size: Medium * Flow: Perennial * Temperature: Warm * Gradient: Moderate * Soil Texture: Fine * Size Discrepancy: Low * Link Category: Moderate * Elevation Category: Medium * Subregion: Central Plains Example of a Distinct Valley Segment Type Analysis Process Step 1 Assign attribute values to reaches and run statistical analyses to determine which attributes describe variability. Analyses are performed for each of the 155 species to determine modeling criteria. Step 3 Assess the relative conservation status of each valley segment type using stewardship data. Develop initial conservation priorities for fish species, valley segments, and watersheds (quality and quantity). Step 2 Generate predicted distributions for fish species from modeling criteria. These results are analyzed with terrestrial GAP stewardship data to show to what extent a species is protected on publicly owned or managed land. Step 4 Identify valley segments and watersheds (HUC 8,10 and 12) which are biologically significant and of relatively high quality. Upper Iowa River Saukenuk Paddlers Canoe & Kayak Club Chimney Rock, Upper Iowa River Saukenuk Paddlers Canoe & Kayak Club 10,992 sampling sites 155 fish species sampled All 99 counties sampled 1884-2002 sampling date range 169 individual sources of data Over 3200 unique stream reaches 100% 8-digit HUCs sampled 92.1% 10-digit HUCs sampled 73.2% 12-digit HUCs sampled Fish Sample Locations Draf t Turkey River Watershed Phase 1 Phase 2 NHD

Aquatic Gap Analysis and Biodiversity Management The AGAP Team: Kevin Kane, Co-PI AIT GIS Facility, ISU, [email protected] Clay Pierce, Co-PI Dept. Natural

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Page 1: Aquatic Gap Analysis and Biodiversity Management The AGAP Team: Kevin Kane, Co-PI AIT GIS Facility, ISU, kkane@iastate.edu Clay Pierce, Co-PI Dept. Natural

Aquatic Gap Analysis and Biodiversity ManagementAquatic Gap Analysis and Biodiversity Management

The AGAP Team:Kevin Kane, Co-PI AIT GIS Facility, ISU, [email protected]

Clay Pierce, Co-PIDept. Natural Resource Ecology and Management, ISU, [email protected]

Patrick Brown, AGAP Web InterfaceAIT GIS Facility, ISU, [email protected]

Robin McNeely, AGAP Hydrographic Base Layer AIT GIS Facility, ISU, [email protected]

Anna Loan-Wilsey, Aquatic Habitat BiologistDept. Natural Resource Ecology and Management, ISU, [email protected]

Please visit the following web pages for more information about Aquatic Gap Analysis:

IRIS and Aquatic GAP - maps.gis.iastate.edu/iris

Iowa Gap Analysis - www.iowagap.iastate.edu

National Gap Analysis - www.gap.uidaho.edu/gap

Final Products / Credits:

The Iowa Aquatic Gap Analysis Program will publish a final report explaining the biodiversity status of breeding fish species in the state. In conjunction with this biodiversity analysis, an atlas of fish species will also be published.

The documents will be available on CD and on the Iowa Aquatic GAP website in Adobe Acrobat .pdf format. The GIS datasets used to create the stewardship and aquatic species layers will be available for downloading via ftp service. This same GIS data will be available for interactive viewing and querying over the Internet using ESRI’s Internet Map Server software.

Credits:

Iowa State UniversityIowa Dept. of Natural ResourcesMissouri Resource Assessment Partnership National Gap Analysis Program

AGAP Cooperators:

Iowa Aquatic Gap: Modeling Fish Distributions in Iowa Rivers

Robin L. McNeely2, Anna K. Loan-Wilsey1, Patrick D. Brown2, Kevin L. Kane2, and Clay L. Pierce3

1Department of Natural Resource Ecology and Management, Iowa State University, Ames, Iowa; 2GIS Facility, Iowa State University, Ames, Iowa; 3USGS, Iowa State University, Ames, Iowa

Accessibility of InformationAccessibility of Information

IRIS ArcIMS interface showing fish range (http://maps.gis.iastate.edu/iris)

Aquatic GAP data users will have on-line, real time access to data through an ArcIMS map service and the ability to download data through FTP. Access via the internet map server will allow users to have the latest version of data without relying on updates to CDs plus the ability to analyze the data using GIS tools without the purchase of costly software. The Iowa Aquatic Gap dataset will be part of the IRIS IMS service.

The web interface will include basic GIS functions, including the ability to query, classify, and select features. The site will also include report functionality for user selected fish species, river reaches or watersheds.

August 4, 2004

Provide a standardized base layer for sample locational accuracy

Characterize aquatic biodiversity throughout Iowa at the regional, watershed, and valley segment scales Identify the extent to which current management efforts are conserving aquatic biodiversity in Iowa at the regional, watershed, and valley segment scalesHelp to direct management, protection, restoration, and educational efforts within Iowa’s river resourcesPrioritize conservation effortsProvide easy accessibility to all information

Aquatic Gap GoalsAquatic Gap GoalsHydrographic Base LayerHydrographic Base Layer

Aquatic GAP uses a modified version of the National Hydrography Dataset (NHD). The original dataset is a product of the collaboration between the USGS and the USEPA.

http://nhd.usgs.gov

The project area for Iowa encompasses 57 HUC level 8 watersheds. The individual watershed coverages were appended into one coverage and modified with Arc AML scripts provided by staff at the Missouri Resource Assessment Partnership (MoRAP) in Columbia, MO.

E. Broadleaf ForestAquatic Subregion

Central PlainsAquatic Subregion

The modified NHD coverage was sent to MoRAP for additional processing that resulted in a set of standard attributes being added to the coverage table.

The Missouri Aquatic Gap modeling process had determined a recommended set of attributes and MoRAP generated these attributes for the Iowa coverage.

The Iowa Aquatic Gap team will decide which of the available attributes will actually be used in the modeling process.

The predictor variables under consideration for modeling inputs include stream flow, temperature, general size category, general downstream size category, soil or geology indicator, gradient category, stream maximum and minimum elevation and downstream size discrepancy category.

Fish Community DatabaseFish Community Database

Objectives Create one database that would give electronic access to all historic riverine fish sampling data in Iowa

Geographically link each community collection to the National Hydrography Dataset (NHD) and to appropriate Hydrologic Units using GIS

Database Design

AGAP staff either directly transferred or manually entered data obtained into a Microsoft Access relational database consisting of separate but related tables that contain three primary elements:

information about the collector and collection, including IBI if available information about the location of each sample information about the species collected

By using a unique numeric identifier for each sample, a direct relationship back to the original data is ensured, allowing other information not captured in our database to be retrieved by future investigators.

Data Gathering Methods

To be comprehensive in data gathering, several methods were used to locate riverine fish records. These strategies included:

visiting 15 Iowa DNR offices and field stations across Iowa to acquire field notes and reports literature searches using bibliographies, print and electronic database indexes and abstracts, and library catalogs to acquire published literature, dissertations and government reports acquiring museum collection records through web-accessible database searches as well as direct contact with curators directly contacting individual fisheries investigators to acquire unpublished field notes

Fish Database Summary

Species Range DeterminationSpecies Range Determination

Preliminary fish ranges based on sample data were established at the HUC 8 level. Draft maps for all 157 species were sent to professional fish biologists in Iowa for review.

Final range maps will be used to limit the predicted distribution of a species once the model is run to identify potential river reaches.

Draft range map for Brook trout, Salvelinus fontinalis

Predictive Distribution Modeling ProcessPredictive Distribution Modeling Process

Predictive Distribution Models

Use sampled reach values for predictor variables as input to

decision tree.For each species, a statement will

be created of values for each predictor variable.

Predicted Distributions

ArcMap will be used to select relevant values for each predictor variable per fish and the selected reaches will be

the predicted distribution for that fish.

Fish Community Database

Data CollectionDatabase Creation

Shapefile Generation

State Fish Species List

Expert

Review

Species Point Distributions and Range Maps

Plot Species Point LocationsAssign species to HUC 8

Expert Review of Ranges

Developing a Data Layer of Valley Segment Types

Purpose Delineate distinct stream environments Serve as the backbone for analyzing conservation status of stream segments

Protocol The Nature Conservancy’s Aquatic Community Classification Framework Based on ecoregions and watersheds aka EcoDrainage Units (EDUs)

* River Size: Medium* Flow: Perennial

* Temperature: Warm* Gradient: Moderate* Soil Texture: Fine

* Size Discrepancy: Low* Link Category: Moderate

* Elevation Category: Medium* Subregion: Central Plains

Example of a Distinct Valley Segment Type

Analysis Process

Step 1

Assign attribute values to reaches and run statistical

analyses to determine which attributes describe variability. Analyses are performed for each of the 155 species to

determine modeling criteria.

Step 3

Assess the relative conservation status of each valley segment type using stewardship

data. Develop initial conservation priorities for fish species, valley segments, and watersheds

(quality and quantity).

Step 2

Generate predicted distributions for fish species from modeling criteria.

These results are analyzed with terrestrial GAP stewardship data to

show to what extent a species is protected on publicly owned or

managed land.

Step 4

Identify valley segments and watersheds (HUC 8,10 and 12) which are biologically significant

and of relatively high quality.

Upper Iowa River

Saukenuk Paddlers Canoe & Kayak Club Chimney Rock, Upper Iowa River

Saukenuk Paddlers Canoe & Kayak Club

10,992 sampling sites 155 fish species sampled All 99 counties sampled 1884-2002 sampling date range 169 individual sources of data Over 3200 unique stream reaches

100% 8-digit HUCs sampled92.1% 10-digit HUCs sampled73.2% 12-digit HUCs sampled

Fish Sample Locations

Draft

Turkey RiverWatershed

Phase 1

Phase 2

NHD