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ECOLOGY AND POPULATION GENETICS OF MOTTLED DUCKS WITHIN THE SOUTH ATLANTIC COASTAL ZONE by GUO-JING WENG (Under the Direction of Sara H. Schweitzer) ABSTRACT The mottled duck (Anas fulvigula maculosa) is a non-migratory waterfowl species native to Texas and Louisiana. The subspecies, A. f. fulvigula, is endemic to Florida. About 1,200 mottled ducks were introduced to the Santee River Delta and the ACE (Ashepoo, Combahee, and Edisto Rivers) Basin of South Carolina during 1975-82 from their native habitats for hunting opportunities. Impacts of translocation and establishment of mottled ducks on the introduced population per se, on other native species, and on ecosystem processes were not considered. I collected harvest data and survey data to evaluate the change in abundance and distribution of mottled ducks along the South Atlantic Coastal Zone (SACZ). Abundance of mottled ducks in South Carolina has increased since the end of the introduction. Distribution of mottled ducks expanded southward and two new breeding populations were established by the introduced birds in Savannah, South Carolina and Rhetts Island, Altamaha Wildlife Management Area (WMA) in Georgia. I studied factors affecting habitat use by mottled ducks at Bear Island WMA. Water depth, submerged vegetation, and aquatic invertebrates were measured at locations used and not used by mottled ducks. Water depth was the only factor associated with habitat use by mottled ducks and they seldom used water deeper than 25 cm. I used nine microsatellite DNA loci to

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Page 1: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

ECOLOGY AND POPULATION GENETICS OF MOTTLED DUCKS WITHIN

THE SOUTH ATLANTIC COASTAL ZONE

by

GUO-JING WENG

(Under the Direction of Sara H. Schweitzer)

ABSTRACT

The mottled duck (Anas fulvigula maculosa) is a non-migratory waterfowl species native to

Texas and Louisiana. The subspecies, A. f. fulvigula, is endemic to Florida. About 1,200 mottled

ducks were introduced to the Santee River Delta and the ACE (Ashepoo, Combahee, and Edisto

Rivers) Basin of South Carolina during 1975-82 from their native habitats for hunting

opportunities. Impacts of translocation and establishment of mottled ducks on the introduced

population per se, on other native species, and on ecosystem processes were not considered. I

collected harvest data and survey data to evaluate the change in abundance and distribution of

mottled ducks along the South Atlantic Coastal Zone (SACZ). Abundance of mottled ducks in

South Carolina has increased since the end of the introduction. Distribution of mottled ducks

expanded southward and two new breeding populations were established by the introduced birds

in Savannah, South Carolina and Rhetts Island, Altamaha Wildlife Management Area (WMA) in

Georgia. I studied factors affecting habitat use by mottled ducks at Bear Island WMA. Water

depth, submerged vegetation, and aquatic invertebrates were measured at locations used and not

used by mottled ducks. Water depth was the only factor associated with habitat use by mottled

ducks and they seldom used water deeper than 25 cm. I used nine microsatellite DNA loci to

Page 2: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

analyze 807 mottled ducks collected from South Carolina, Georgia, Florida, Louisiana, and

Texas. The genetic data showed a clear hierarchical population structure reflecting the

geographic relationship of mottled ducks along the SACZ. The two subspecies of mottled ducks

were separated in a cluster analysis using the genetic data except that mottled ducks from Guana

River WMA in Florida were in the cluster of Texas-Louisiana subspecies. Gene flow from the

introduced birds to native populations in Florida was revealed by the population structure,

smaller genetic distance between Georgia and Florida populations than that among native

populations, negative correlation between genetic and geographic distances, and private alleles

found in Guana River population. Management practices for mottled ducks may seek to control

this directional gene flow.

INDEX WORDS: Mottled ducks, Anas fulvigula, Habitat, Microsatellites, Population structure,

Gene flow, South Carolina, Georgia

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ECOLOGY AND POPULATION GENEITCS OF MOTTLED DUCKS WITHIN

THE SOUTH ATLANTIC COASTAL ZONE

by

GUO-JING WENG

B.S., National Taiwan University, Taiwan, 1994

M.S., National Taiwan University, Taiwan, 1997

M.S., University of Georgia, 2006

A Dissertation Submitted to the Graduate Faculty of the University of Georgia in Partial

Fulfillment of the Requirements for the Degree

DOCTOR OF PHILOSOPHY

ATHENS, GEORGIA

2006

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© 2006

Guo-Jing Weng

All Rights Reserved

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ECOLOGY AND POPULATION GENETICS OF MOTTLED DUCKS WITHIN

THE SOUTH ATLANTIC COASTAL ZONE

by

GUO-JING WENG

Major Professor: Sara H. Schweitzer

Committee: Darold P. Batzer Campbell Joseph Nairn James L. Shelton

Electronic Version Approved: Maureen Grasso Dean of the Graduate School The University of Georgia December 2006

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ACKNOWLEDGEMENTS

This research was funded by the Georgia Department of Natural Resources, Delta

Waterfowl Foundation, Georgia Waterfowl Association, Wildlife Forever, and Georgia

Ornithological Society. I thank the University of Georgia, Daniel B. Warnell School of Forestry

and Natural Resources for assistantship funds. Additional funds for travel and meetings were

from the Graduate School at the University of Georgia.

I thank my advisor, Dr. Sara Schweitzer, for this opportunity to work with her on this

project and her instruction and support. I also thank Drs. Joseph C. Nairn, Darold P. Batzer, and

James L. Shelton for their guidance on this project and thorough review of this dissertation.

Brant Faircloth designed primer sets for this research and taught me all the necessary lab

techniques. Dr. John Carroll allowed me to work in his lab. I especially thank Mr. Phil

“Rosebud” Hale who spent tremendous amount of time helping me in the field and provided a

cordial friendship.

I am grateful to people who provided me duck samples, survey data, field assistance, and

information about the study sites. They are Diane Eggeman, Joe Benedict, Jamie Feddersen,

Justin Ellenberger, Ron Bielefeld, and Matthew Hortman from Florida Fish and Wildlife

Conservation Commission, Jeb Linscombe, Steven Reagan, and James Harris from Louisiana

Department of Wildlife and Fisheries, Patrick Walther from U.S. Fish and Wildlife Service,

McFaddin National Wildlife Refuge in Texas, Derrell Shipes, Walt Rhodes, Dean Harrigal,

Felicia Sanders, and Jim Westerhold from South Carolina Department of Natural Resources,

Russ Webb from U.S. Fish and Wildlife Service, Savannah National Wildlife Refuge in South

iv

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Carolina, David Griffin from the Department of Transportation in Georgia, and James Steve

Calver from the U.S. Army Corps of Engineers. Carmen Martin and Greg Balkcom from

Georgia Department of Natural Resources joined this project from the beginning, assisted me in

the field, provided me survey data, and let me join the survey flight over Rhetts Island, Altamaha

Wildlife Management Area in Georgia. I also thank staff in the Warnell School of Forestry and

Natural Resources for their assistance in the graduate program.

v

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TABLE OF CONTENTS

Page

ACKNOWLEDGEMENTS........................................................................................................... iv

LIST OF TABLES......................................................................................................................... ix

LIST OF FIGURES .........................................................................................................................x

CHAPTER

1 INTRODUCTION AND LITERATURE REVIEW ...........................................................1

Introduction......................................................................................................................1

Literature Review.............................................................................................................4

2 CHANGES IN ABUNDANCE AND DISTRIBUTION OF MOTTLED DUCKS

WITHIN THE SOUTH ATLANTIC COASTAL ZONE ..............................................10

Introduction....................................................................................................................10

Study Areas....................................................................................................................12

Methods..........................................................................................................................13

Results............................................................................................................................13

Discussion......................................................................................................................15

3 HABITAT USE OF MOTTLED DUCKS AT THE BEAR ISLAND WILDLIFE

MANAGEMENT AREA ...............................................................................................23

Introduction....................................................................................................................23

Methods..........................................................................................................................25

Results............................................................................................................................28

vi

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Discussion......................................................................................................................29

4 POPULATION STRUCTURE AND GENE FLOW OF MOTTLED DUCKS WITHIN

THE SOUTH ATLANTIC COASTAL ZONE..............................................................38

Introduction....................................................................................................................38

Methods..........................................................................................................................41

Results............................................................................................................................49

Discussion......................................................................................................................53

5 CONCLUSIONS................................................................................................................81

LITERATURE CITED ..................................................................................................................84

vii

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LIST OF TABLES

Page

Chapter 3

3.1 Density of aquatic invertebrates and fish in locations used and unused by

mottled ducks at Bear Island Wildlife Management Area, South Carolina,

June-July 2003 ..................................................................................................................34

Chapter 4

4.1 Mottled duck sample sources, seasons, and sample sizes from South

Carolina, Georgia, Louisiana, Texas, and Florida during 2001-05 ..................................65

4.2 Sequences and motifs of the nine primer sets used for the final genotyping

of mottled ducks ...............................................................................................................66

4.3 Descriptive statistics for each locus across 10 newly defined mottled duck

populations........................................................................................................................67

4.4 P-values for the Hardy-Winberg Equilibrium (HWE) test for each locus

and sample ........................................................................................................................68

4.5 Ten newly defined mottled duck populations and samples combined .............................69

4.6 Pair-wise FST (above diagonal) and p-values for G-based test (below

diagonal) for the 10 newly defined populations ...............................................................70

4.7 Genetic characteristics of microsatellite loci in ten mottled duck

populations........................................................................................................................71

4.8 Partition of the total genetic variance of mottled duck populations .................................72

viii

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4.9 Results of tests of bottleneck events in mottled duck populations ...................................73

4.10Estimated number of migrants per generation between each pair of mottled

duck populations...............................................................................................................74

ix

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LIST OF FIGURES

Page

Chapter 2

2.1 Locations from which aerial survey and harvest data were collected on

mottled ducks ..................................................................................................................19

2.2 Number of mottled ducks harvested per 100 hunters in four wildlife

management areas ...........................................................................................................20

2.3 Harvest data for mottled ducks from Guana River WMA...............................................21

2.4 Recovery locations of mottled ducks banded in Florida..................................................22

Chapter 3

3.1 Frequencies of mottled ducks observed at 10 of 25 impoundments at Bear

Island Wildlife Management Area, South Carolina, June-July 2003 ..............................35

3.2 Frequencies of behaviors exhibited by mottled ducks at Bear Island

Wildlife Management Area, South Carolina, June-July 2003 .........................................36

3.3 Frequencies of distance to nearest vegetation from mottled ducks at Bear

Island Wildlife Management Area, South Carolina, June-July 2003 ..............................37

Chapter 4

4.1 Locations from which samples of mottled ducks were obtained, 2001-

2005, for genetic analysis ................................................................................................75

x

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4.2 Population structure of the 10 newly defined mottled duck populations.

The structure was established using Reynold’s (1983) genetic distance and

UPGMA algorithm...........................................................................................................76

4.3 Population structure of the 10 newly defined mottled duck populations

established by using Reynold’s (1983) genetic distance and Neighbor-

Joining algorithm .............................................................................................................77

4.4 Log10(number of migrants) plotted against log10(geographic distance) for

the five mottled duck populations (SCR, Bear, Rhetts, Orange, and Guana)

along South Atlantic Coastal Zone ..................................................................................78

4.5 Allelic pattern across 10 newly defined mottled duck populations in South

Carolina, Georgia, Florida, Louisiana, and Texas ...........................................................79

4.6 Average assignment index correction (AIc) for sex and age categories of

mottled ducks in Florida, Louisiana, and Texas ..............................................................80

xi

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CHAPTER 1

INTRODUCTION AND LITERATURE REVIEW

INTRODUCTION

Translocation is broadly defined as moving a living organism from one area and releasing it

freely in another (IUCN 2006). Translocations can be a conservation strategy that increases

genetic diversity of small populations (Griffith et al. 1989, Newman and Tallmon 2001),

establishes satellite populations to reduce the risk of extinction (Goodman 1987), or re-

establishes or augments wild populations (Kleiman et al. 1991). However, most motivations to

translocate animals have been based on human needs. Griffith et al. (1989) found that among 93

species of birds and mammals translocated between 1973 and 1986, 90% were game species and

only 7% were threatened, endangered, or sensitive species.

Mottled ducks (Anas fulvigula) were introduced to the Santee River Delta and the ACE

(Ashepoo, Combahee, and Edisto Rivers) Basin of South Carolina from Texas, Louisiana, and

Florida during 1975 and 1982 (T. Strange, South Carolina Department of Natural Resources, pers.

comm.). The introduction was driven by the desire to increase hunting opportunities in South

Carolina. Impacts of translocation and establishment of mottled ducks on the introduced

population per se, on other native species, and on ecosystem processes were not considered.

This was not uncommon in the 1970s and 1980s because 73% of wildlife agencies surveyed by

Griffith et al. (1987) did not specify any monitoring or evaluation protocols.

Without careful evaluation of possible impacts, translocation may damage the ecosystem,

native species, or translocated species. Alien species could introduce diseases or parasites to the

1

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new ecosystem (Dobson and May 1986, Szabo 2003), alter the habitat (Danell 1979, Jackson

1988, Moore et al. 1999), out compete native species (Moyle 1973), or suffer from increased

mortality due to disease after translocation (Nolet et al. 1997). Stress from translocation could

induce abnormal behaviors displayed by released individuals (Fitch and Shirer 1971, Reinert

1991). Although translocation is a conservation strategy to bring about human-induced gene

flow and enhance genetic diversity of small populations, it also breaks down the genetic isolation

among species, interferes with the dynamics of ecosystems, and causes extinction of species.

Genetic isolation has been essential for the evolution and maintenance of the diversity of plants

and animals composing the biological wealth of our planet (IUCN 2006). A well-known

example is the Ibex (Capra ibex ibex) that was re-introduced to Czechoslovakia from Austria,

Turkey, and Sinai. Fertile hybrids produced offspring in winter and the population eventually

went extinct (Greig 1979). Such an unfortunate outcome resulted from a conservation-oriented

translocation. For those translocations motivated by human benefits without thorough

consideration, unexpected negative effects are likely to happen.

A translocation is defined as successful when the translocated population is self-sustainable

(Griffith et al. 1989). Foose (1991) listed genetic and demographic objectives of a conservation

program to establish a self-sustainable population: 1) the probability of survival of the population;

2) the kinds and amounts of genetic diversity to be preserved; and 3) the period of time over

which this genetic diversity and survival probability are to be maintained. To prevent potential

damage caused by misused translocations, the IUCN (2006) suggested special attention should

be paid before conducting a translocation. Some specific considerations are: 1) the probability of

the alien species increasing in number, 2) the probability that the alien species will spread

2

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beyond the habitat into which it will be introduced and the species’ mode of dispersal, and 3) the

capacity of the species to reduce native species by interbreeding with them.

The above questions are not easy to answer before a species is actually translocated.

However, the mottled ducks introduced to South Carolina provide an excellent opportunity for us

to investigate and answer the questions. Our data collected from hunters’ harvests and monthly

aerial surveys by Georgia Department of Natural Resources (DNR) from 2002-2005, identified a

resident population on Rhetts Island, about 64 km north of the border between Georgia and

Florida. This southward expansion of the mottled duck population from South Carolina to

Georgia is a great concern to ornithologists because of efforts to maintain the Florida mottled

duck as a distinct population (Florida Fish and Wildlife Conservation Commission 2006a).

Although gene flow was not detected between Florida and Texas/Louisiana populations of

mottled ducks by using mitochondrial DNA (McCracken et al. 2001), the South

Carolina/Georgia populations are geographically near Florida and gene flow may occurr.

Shortly after the introduction, a banded individual from the birds released in South Carolina was

found in Florida (U.S. Geological Survey, Biological Resources Division, Patuxent Wildlife

Research Center, Laurel, Maryland, cited in McCracken et al. 2001). Based on these

observations, it is possible that the introduction of mottled ducks in the South Atlantic Coastal

Zone (SACZ) has broken the isolation of the Florida mottled duck population.

This project aimed to answer questions that could not be evaluated before the introduction

of mottled ducks. Specifically,

1) How the abundance and distribution of mottled ducks released in South Carolina changed

over the past 30 years,

3

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2) How mottled ducks use habitats in the SACZ and the critical factors that determine their

habitat use, and

3) How mottled ducks in SACZ are structured genetically, their genetic composition compared

with source populations, and the possibility of gene flow between Florida and GA-SC

populations.

Overall, this project aimed to understand how an introduced waterfowl species changed in

abundance and distribution, its genetic structure and demography, and its impacts on the genetics

of closely related species and themselves. Subsequent to this research the goal was to provide

suggestions for management practices for the introduced and native mottled duck populations.

LITERATURE REVIEW

Classification

The mottled duck (Anas fulvigula maculosa) is regarded as one of more than 20 kinds of

mallards worldwide (Scott 1972, Palmer 1976). Five other North American mallards are the

Florida duck (A. f. fulvigula), the Mexican duck (A. f. diazi), the mallard (A. platyrhynchos), and

the black duck (A. rubripes). The classification status of mottled ducks in North America has

long been a debate among ornithologists. The Florida mottled duck was first described by

Ridgway (1874) and was considered a subspecies of the black duck (Anas obscura, currently

Anas rubripes). It later was designated as a full species, Anas fulvigula (Ridgway 1878 as cited

in Johnsgard 1961). The mottled duck in Texas was first found by Sennett (1889) at Corpus

Christi Bay near Padre Island in 1882 and was considered a new species, Anas maculosa. The

mottled duck was added to the American Ornithologists’ Union (AOU) Check-list in 1890 as

Anas fulvigula maculosa (Johnsgard 1961). There were some arguments about the classification

status of mottled ducks and the Florida mottled duck in 1920s-1930s (Johnsgard 1961). Bellrose

4

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(1980) considered the mottled duck and Florida duck as two subspecies, A. f. maculosa and A. f.

fulvigula, respectively, and Florida Fish and Wildlife Conservation Commission (2006a) also

considers the Florida duck a unique subspecies in a conservation plan for the population. But

current AOU Check-list recognizes only one species (Anas fulvigula) for mottled ducks.

Moorman and Gray (1994) did not separate the species either.

Description

Both the Florida duck and mottled duck are non-migratory, different from other mallard

species. Morphology of the Florida duck is so similar to that of the mottled duck that they can

hardly be identified at a distance. According to Bellrose (1980), both subspecies are darker than

the hen mallard, but the mottled duck has darker plumage and darker streaking on the checks and

neck than the Florida duck. The speculum of both subspecies is green but the mottled ducks’ is

more bluish. The speculum is not bordered by white as it is in the mallards, but sometimes a

narrow white bar occurs at the trailing edge of the speculum of both subspecies. Both sexes have

a mottled dark brown body plumage and females have orange bills with black spots across the

saddle. Male mottled ducks have olive-green bills but male Florida ducks have bright yellow

bills with a black spot at the base (Bellrose 1980).

Distribution and Abundance

Annual, systematic population surveys are only conducted in Florida. These survey data

and other studies (Zwank et al. 1989, Neaville 1993, cited in Moorman and Gray 1994) reveal

that populations may fluctuate widely in response, primarily, to drought conditions. The mottled

duck population may be stable or declining within its range, but systematic population data are

not available.

5

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Florida ducks are endemic to the Florida peninsula (Gray 1993). Most Florida ducks occur

on prairies near Lake Okeechobee, St. Johns River and Everglades Agricultural Area (Johnson et

al. 1991). Florida ducks use freshwater emergent wetlands, ditches, wet prairies, and seasonally

flooded marshes associated with major rivers, and Everglades Agricultural Area (Lotter 1969,

Johnson et al. 1991), and also inhabit mosquito control impoundments in coastal areas such as

Tampa Bay, Charlotte Harbor, and the Mosquito and Indian River Lagoons (Stieglitz and Wilson

1968, LaHart and Cornwell 1969, Breininger and Smith 1990). Ditches is also an important

habitat for Florida duck (Johnson et al. 1991). Florida ducks select water <15 cm deep and

inhabit the same locations and environments year-round, but they move to more permanent

wetlands during remigial molt or during the winter dry season (Fogarty and LaHart 1971,

Johnson 1973, Johnson et al. 1991, Gray 1993). Lotter (1969) believed that Florida ducks

moved to coastal areas in response to dry conditions in the prairies.

The range of mottled duck begins at the Laguna de Tamiahua south of Tampico, Mexico,

and extends north along the Gulf Coast into Hancock and Jackson counties, Mississippi. The

range extends inland about 161 km (100 miles) along the middle Texas Coast and 80 km (50

miles) in southwest Louisiana (Stutzenbaker 1988).

Habitat Use

Mottled ducks frequently use non-tidal, fresh to brackish ponds of coastal marshes, and

agricultural areas adjacent to coastal freshwater marshes (Grand 1988 as cited in Moorman and

Gray 1994; Zwank et al. 1989). In coastal Louisiana and southeastern Texas, greatest densities

of mottled ducks are found in fresh and intermediate marshes (Paulus 1988). Brackish marsh

with irregular ponds supports the highest mottled duck breeding and wintering densities

(Stutzenbaker 1988).

6

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Mottled ducks are usually found in shallow water (1-30 cm) areas near shorelines with

abundant vegetation including grasses (Paspalum spp., Panicum spp.), bulrush (Scirpus

californicus), rice cutgrass (Leersia hexandra), and bulltongue (Sagitaria lancifolia) (White and

James 1978). In Louisiana, mottled ducks rarely used habitats where water depth exceeded 15

cm (Paulus 1984). From late August to early October, large postbreeding concentrations may

occur coincident with harvest of rice fields in Louisiana and Texas (Stutzenbaker 1988). Similar

to Florida ducks, movement to coastal areas in response to dry conditions has been reported for

mottled ducks (Stutzenbaker 1988).

Genetic Studies and Hybridization

McCracken et al. (2001) analyzed 5’ control region sequences from the mitochondrial DNA

of 219 mottled ducks, 4 Mexican ducks, 13 American black ducks, and 10 mallards. They

constructed a neighbor-joining tree to reveal the phylogenetic relationships of the ducks. They

delineated two major clades on the tree. One clade was composed of two groups of haplotypes;

one was composed of 48.9% mottled ducks from Texas and Louisiana and two mallards, and the

other was composed of 72.7% mottled ducks from Florida only. Another clade was composed of

all the remaining ducks without clear geographic or species-specific patterns. The authors made

two conflicting conclusions relative to the two clades. For the clade with clear geographic

structure, they concluded that gene flow was not happening or it was undetectable across the

central Gulf Coast. For the intermingled clade, they interpreted that the clade may result from

hybridization across species or incomplete lineage sorting from a polymorphic ancestral gene

pool.

Williams et al. (2005) compared allozyme and microsatellite variation of mottled duck

populations in Florida and Texas and found overall significant differentiation between the two

7

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populations. Heterozygosity and allelic diversity for allozymes were lower in the Florida

population, but those for microsatellites were similar in the two populations. The number of

migrants between the two populations was estimated to be 2.2 (microsatellite) or 1.1 (allozyme)

per generation and only 5-6 % of the variation was partitioned between populations. They

suggested that the results indicated limited gene flow between the two populations and the two

populations should be managed separately.

For the Florida mottled duck population, Williams et al. (2002) did not find significant

genetic differentiation among local populations in a microsatellite study. They suggested that

short range adult dispersal and a lack of natal philopatry may explain the limited population

differentiation.

Williams et al. (2005) found asymmetric hybridization between mottled ducks and mallards

in Florida. Their results estimated that about 11% of mottled ducks and 3.4% of mallards were

hybrids. They were not able to distinguish mallards and mottled ducks from a South Carolina

sample, indicating severe hybridization or simply a result of low sample size (n = 24 for mottled

ducks, n = 33 for mallards), number of loci (n = 5), and heterozygosity (He = 0.52 for mottled

ducks, He = 0.60 for mallards).

The introduction of mottled ducks to South Carolina was motivated by increasing hunting

opportunities. It is important both to conservation and recreation to formulate a sound

management practice for game species. Especially when managing a localized and non-

migratory species, regional differences due to the heterogeneity among habitats should be taken

into account because region-specific situations may call for different management approaches.

However, since the introduction of mottled ducks to South Carolina in the 1970s, there has been

no study on this newly established mottled duck population. This project aimed to investigate

8

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how this alien species has reacted to its new environment by estimating their abundance,

distribution, and habitat use. Also, hybridization between the two subspecies of mottled ducks is

likely to happen because the introduction of mottled ducks to South Carolina has reduced the

geographic gap between the Gulf Coast and Atlantic populations. Therefore, this project also

aimed to detect possible gene flow between mottled duck populations in Georgia-South Carolina

and Florida. The new information generated from this project will provide specific suggestions

for the management of the new mottled duck population in the South Atlantic Coastal Zone.

9

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CHAPTER 2

CHANGES IN ABUNDANCE AND DISTRIBUTION OF MOTTLED DUCKS WITHIN THE

SOUTH ATLANTIC COASTAL ZONE

INTRODUCTION

Mottled ducks (Anas fulvigula) are endemic to the Gulf Coast marshes of Texas and

Louisiana, and freshwater marshes of Florida (Moorman and Gray 1994). They are one of few

North American dabbling ducks that do not migrate (Bellrose 1980). The Florida mottled duck

(A. f. fulvigula) is considered a sub-species. Almost 1,200 mottled ducks from Texas, Louisiana,

and Florida were introduced to the Santee River Delta and the ACE (Ashepoo, Combahee, and

Edisto Rivers) Basin of South Carolina 1975-1982, mostly to increase hunting opportunities (T.

Strange, South Carolina Department of Natural Resources [DNR], unpublished data). The

impacts of introducing mottled ducks on ecosystem processes, other duck species, and the

introduced population per se were not considered.

Two potential impacts of these introductions could include: 1) Dispersal from sites

where the species was introduced, and 2) an increase in abundance such that the population

negatively influences the environment, especially to the biotic community into which it was

introduced (IUCN 2006). Potential negative impacts are difficult to predict before an

introduction. The introduction of mottled ducks to the South Atlantic Coastal Zone (SACZ)

provides a good opportunity to understand how non-migratory waterfowl might disperse beyond

release sites.

10

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The establishment of introduced species breaks down the genetic isolation of

communities of co-evolving species of plants and animals. Such isolation has been essential for

the evolution and maintenance of the diversity of plants and animals composing the biological

wealth of our planet (IUCN 2006). The introduction, establishment, and dispersal of mottled

ducks in the SACZ may have broken the isolation of the Florida mottled duck population.

Although there is no gene flow between Florida and Texas-Louisiana populations of mottled

ducks (McCracken et al. 2001), a banded individual from birds released in South Carolina was

found in Florida (U.S. Geological Survey, Biological Resources Division, Patuxent Wildlife

Research Center, Laurel, Maryland, cited in McCracken et al. 2001), thus the possibility of

southward dispersal exists. Such southward dispersal of mottled ducks concerns ornithologists

because of the desire to maintain the Florida mottled duck as a distinct population (Florida Fish

and Wildlife Conservation Commission 2006a).

Information on changes in mottled ducks’ abundance and distribution in the SACZ has

not been collected systematically, but this information is important for the management of

mottled ducks and conservation of native species. The only possible sources of this information

are survey and harvest data from state wildlife agencies. Survey data may not be reliable due to

inconsistent survey methods, different observers, different survey areas, irregular survey

frequencies, and unknown precision of estimates and detectability of birds (R. Kaminski,

Mississippi State University, pers. comm.). Harvest data might not be directly related to the

overall abundance of mottled ducks in South Carolina due to redistribution of birds caused by

weather events or changes in habitat availability (R. Kaminski, Mississippi State University, pers.

comm.). However, harvest data have their merit in that data were collected at same locations and

seasons, bird species were examined in hand, and numbers of birds and hunters were recorded

11

Page 25: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

precisely. After standardization, harvest data can reflect a change in abundance of mottled ducks

at certain wildlife management areas. The objective of this research was to evaluate the change

in abundance and distribution of mottled ducks released in South Carolina over the past 30 years.

STUDY AREAS

Harvest data were collected from Samworth, Santee Coastal Reserve, Santee Delta,

Hatchery, Sandy Beach, Donnelley, and Bear Island WMAs in South Carolina and Guana River

WMA in Florida (Fig. 2.1).

Altamaha WMA was a 11,857-ha managed marsh complex in McIntosh County, Georgia.

The WMA included 3 management units consisting of Butler Island, Champney Island, and

Rhetts Island. Butler and Champney Islands were tidal, freshwater areas that were drained

seasonally and managed as moist soil impoundments for migratory and wintering waterfowl.

Rhetts Island was a tidal, fresh to brackish site with three diked impoundments in the Altamaha

River Delta.

Bear Island WMA was part of the ACE Basin, located within the estuary of the Ashepoo

River, South Carolina, and was owned and operated by South Carolina DNR. The WMA was

partitioned into three units: East, West, and Springfield marsh. The brackish marsh area was

managed to provide quality habitat for wintering waterfowl and other wetland wildlife.

Santee Delta was about 24 km south of Georgetown, South Carolina, and composed of

managed brackish wetland impoundments and unmanaged tidal freshwater, brackish, and salt

marsh. Santee Coastal Reserve, located on the south side of Santee Delta, was composed of

managed brackish impoundments and surrounding tidal wetlands.

The Guana River WMA was a coastal barrier beach and a sea island located about 66 km

south of the border of Georgia and Florida. The land was privately owned and open to the public

12

Page 26: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

for hunting before being purchased by the State of Florida in 1984. Upstream marshes were

dammed in 1957 to enhance wintering waterfowl habitat, resulting in the current Guana Lake.

The lake water was brackish near its south end and a freshwater reservoir to north.

METHODS

WMA harvest data, including number of hunters and mottled ducks harvested, were

available only from South Carolina (Strange 1979-2003) and Guana River WMA (M. Hortman,

Florida Fish and Wildlife Conservation Commission [FL FWCC], unpublished data). Harvest

data were collected at each WMA by SC DNR or FL FWCC managers at check stations.

Abundance information derived from harvest data was expressed as number of mottled ducks

harvested per 100 hunters to standardize the data and was defined as “harvest per unit effort”

(HPUE). For Guana River WMA, harvest data were not available before 1984 and in 1993 and

1994. For all WMAs in South Carolina, although harvest data were available after 2001, the

number of hunters was unknown in 1999 and after 2001. Therefore, harvest data for these years

were not analyzed. Springfield marsh was incorporated into the Bear Island hunting program in

the 1994-1995 waterfowl season, and harvests were recorded separately from other areas in Bear

Island WMA. The Wilcoxon 2-sample test (Sokal and Rohlf 1995) was used to test pair-wise

HPUE between WMAs or two periods of time to release the assumption of normality and

requirement of a large sample size. The overall harvest trend in South Carolina was tested using

regression. All statistical analyses were conducted using SAS/STAT software Version 9 for

Windows (SAS Institute Inc., Cary, NC, USA).

RESULTS

Since their introduction in 1975, mottled ducks have been harvested from eight WMAs in

South Carolina. Mottled ducks were harvested rarely in Donnelley (1992, 1994, 1996, and 1997),

13

Page 27: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Hatchery (1991), Sandy Beach (2001), and Samworth (1989-1991 and 1993) WMAs. In other

WMAs, mottled ducks have been harvested almost every year since 1978 (Fig. 2.2).

In Santee Delta, HPUE remained low (average = 1.78, SE = 1.69) since the 1970s (Fig.

2.2). HPUE in Santee Coastal Reserve (average = 1.11, SE = 1.62) and Bear Island (average =

0.78, SE = 0.68) were both low during 1978-1987. Since 1988, HPUE has significantly (p <

0.001, Wilcoxon 2-sample test) increased in both Santee Coastal Reserve (average = 9.85, SE =

4.51) and Bear Island (average = 9.22, SE = 3.52), and the value was higher than that for Santee

Delta in any year (Fig. 2.2). At Springfield marsh, HPUE for 1997 (5.68) and 1998 (1.30) were

lower than those for Santee Coastal Reserve (9.74 and 6.34, respectively) and Bear Island WMA

(9.12 and 9.72, respectively), but the HPUE at Springfield marsh increased in 2000 (22.00) and

2001 (41.43) and was the greatest among all WMAs (Fig. 2.2). When all WMAs were

considered, average HPUE in South Carolina has increased from the introduction years to 2001

in a nonlinear manner. The fitted quadratic regression line was significant (p = 0.0001) (Fig. 2.2).

In addition to the above locations, breeding populations of mottled ducks have been

observed since 1997 at Savannah NWR (R. Webb, USFWS Savannah Coastal Refuge, Savannah,

Georgia, pers. comm.) and since 2001 at Savannah Confined Disposal Facilities (G.-J. Weng,

pers. obs.), both about 65 km south of the ACE Basin and 85 km north of the Rhetts Island.

Monthly aerial surveys conducted by the Georgia DNR from 2002-2005 also identified a resident

population of mottled ducks on Rhetts Island, Altamaha WMA, about 64 km north of the border

of Georgia and Florida (Fig. 2.1).

In Guana River WMA, mottled ducks were harvested rarely before 1995. From 1995-

2001, mottled ducks were harvested every year in Guana River WMA, but the HPUE (average =

2.54, SE = 1.07) was much lower than that in Bear Island (average = 10.94, SE = 3.85), Santee

14

Page 28: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Coastal Reserve (average = 10.20, SE = 3.06), and Springfield WMAs (average = 17.60, SE =

18.21) in South Carolina (Fig. 2.3). From 2002-2005, average HPUE was 2.62 in Guana River

WMA (SE = 0.73), but data are not available from other WMAs.

DISCUSSION

Abundance of mottled ducks reflected in harvest data indicated that the mottled duck in

South Carolina has increased in several WMAs since their introduction. The small bag limit

(one duck per hunter) may reduce the ability to detect the changes in mottled duck abundance

evaluated from harvest data, but some differences among WMAs and apparent increase in

harvest were found. Although Santee Delta and Santee Coastal Reserve were less than 1 km

apart and were on either side of the Santee River, more mottled ducks were harvested in Santee

Coastal Reserve than Santee Delta WMA. In the ACE Basin region, Bear Island WMA was the

only location where mottled ducks were harvested annually. In Springfield marsh, a unit of Bear

Island WMA, harvests quickly increased and were higher than any other WMA in recent years.

These differences indicated that mottled duck distribution was not homogeneous over time and

space. Despite the differences among WMAs, average HPUE from 1978-2001 indicated an

increase in mottled duck abundance in these WMAs.

Mottled ducks have been found at several locations outside the release sites. Apparent

southward expansion of their distribution was revealed by breeding populations of mottled ducks

at Savannah NWR, Savannah CDFs, and Rhetts Island in Altamaha WMA. Although systematic

harvest data were not available from Rhetts Island, mottled ducks have been harvested there

since 2000. Rhetts Island was the southern-most breeding population established by mottled

ducks released in South Carolina. These populations were not established by mottled ducks from

Florida because their distribution has confined to Florida since they were first described by

15

Page 29: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Ridgway (1874). There is no documentation of mottled ducks in Georgia and South Carolina

before they were introduced to South Carolina.

Mottled ducks were also found north and west of the release sites by occasional harvests.

Samworth WMA was the northernmost location (about 36 km north of Santee Coastal Reserve)

where mottled ducks were harvested. Westward movement of mottled ducks was found at Sandy

Beach WMA and Hatchery WMA (both about 80 km from the coast or Santee Coastal Reserve),

and Donnelley WMA (about 20 km from the coast). However, this direction of movement was

rarely documented and these records were winter harvest data, not breeding populations.

Southward expansion was the most apparent movement of mottled ducks and new breeding

populations were established only within the coastal area south of release sites.

Although mottled ducks do not migrate for all practical purposes, relatively short

movements have been documented (Stieglitz and Wilson 1968, Lotter 1969, Stutzenbaker 1988).

Hyde (1958, as cited in Stieglitz and Wilson 1968) reported 13 recoveries of banded Florida

mottled ducks. Within an average time lapse of 6 months between banding and recovery,

mottled ducks moved from 0 to 208 km from the banding location with an average of 72 km.

Based on 105 band returns, Fogarty and LaHart (1971) found an average dispersal distance of 56

km, but 71.4% of the ducks were recovered within 78 km of the release sites. The only and the

longest dispersal outside of the normal range was 432 km (Fogarty and LaHart 1971). These

reports demonstrate a great potential of long distance dispersal by mottled ducks, and the current

distribution of mottled ducks in the SACZ could have been established in a short time after

mottled ducks were released. The distance between Rhetts Island, Altamaha WMA, and the

northern limit of the distribution of Florida mottled ducks is about 216 km, within the dispersal

limit of mottled ducks. Before mottled ducks were introduced in South Carolina, none were

16

Page 30: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

reported north of Florida. Therefore Florida mottled ducks do not appear to naturally disperse

northward into Georgia. A fact overlooked by Fogarty and LaHart (1971) in their paper was that

82% of the ducks released from sites south of Lake Okeechobee dispersed northward and 66% of

the ducks released from sites north of Lake Okeechobee dispersed southward (Fig. 2.4). The

convergence of dispersed birds corresponds with the core breeding area in inland Florida (Florida

Fish and Wildlife Conservation Commission 2006b), in contrast to southward expansion of

mottled duck populations in South Carolina and Georgia. Although the phenomenon has not

been investigated, we suspect that this has been the reason Florida mottled ducks stay in the

peninsula even though Rhetts Island, where the introduced mottled ducks established the

southernmost breeding population, was within their dispersal limit. Given the dispersal ability of

mottled ducks, the southward expansion of their distribution, and their tendency to move toward

inland Florida, further southward expansion of the mottled duck distribution from Rhetts Island

is possible. The possibility is also supported by the harvest data in Guana River WMA. Before

1995, there were virtually no mottled ducks harvested in Guana River WMA, but since 1995 the

harvests on mottled ducks have been consistent, although much lower than those in South

Carolina, indicating the mottled duck population in Guana River WMA might be established by

small number of migrants from Georgia.

I conclude that mottled ducks have a great potential to disperse long distances but

successful breeding populations were established only south of release sites in the SACZ. HPUE

has increased since mottled ducks were introduced to South Carolina, indicating their increase in

abundance. The differences in mottled duck abundance at different locations provide good

opportunities to study factors associated with the abundance of mottled ducks in the SACZ. I

suggest that wildlife agencies incorporate standardized and consistent survey efforts to provide

17

Page 31: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

improved estimates of mottled duck abundance and distribution in the SACZ. The southward

expansion and increase in abundance of this introduced population should concern biologists

because of the possible contact between two subspecies of mottled ducks.

18

Page 32: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Figure 2.1. Locations from which aerial survey and harvest data were collected on mottled

ducks. 1: Samworth Wildlife Management Area (WMA), 2: Santee-Delta and Santee

Coastal Reserve WMAs, 3: Sandy Beach WMA, 4: Hatchery WMA, 5: Bear Island and

Springfield WMA, 6: Donnelley WMA, 7: Savannah National Wildlife Refuge (NWR)

and Savannah Confined Disposal Facilities (CDFs), 8: Altamaha WMA, 9: Guana River

WMA. New breeding populations were found at Savannah NWR, Savannah CDFs, and

Altamaha WMA.

19

Page 33: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

0

5

10

15

20

25

30

35

40

45

78 80 82 84 86 88 90 92 94 96 98 00

Year

Har

vest

per

100

hun

ters

Bear IslandSantee Coastal ReserveSantee DeltaSpringfieldAverage harvestPredicted average harvest

Figure 2.2. Number of mottled ducks harvested per 100 hunters in four wildlife management

areas. Bear Island and Santee Coastal Reserve were closed in 1980. Bear Island, Santee Coastal

Reserve, and Santee-Delta were closed in 1981. Springfield WMA was not open before 1994 and

data were not available until 1997. Number of hunters was unknown for 1999 and after 2001.

20

Page 34: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

0.0

0.5

1.0

1.5

2.0

2.5

3.0

3.5

4.0

4.5

5.0

86 87 88 89 90 91 92 93 94 95 96 97 98 99 00 01 02 03 04 05

Har

vest

per

100

hun

ters

Figure 2.3. Harvest data for mottled ducks from Guana River WMA. Data were not

available in 1993 and 1994 and before 1986.

21

Page 35: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Figugre 2.4. Recovery locations of mottled ducks banded in Florida. 1: Merritt Island, 2:

Andytown, 3: Sanibel Island, and 4: Kissimmee Chain of Lakes (after Fogarty and LaHart

1971).

22

Page 36: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

CHAPTER 3

HABITAT USE OF MOTTLED DUCKS AT THE BEAR ISLAND WILDLIFE

MANAGEMENT AREA

INTRODUCTION

Since private owners and the government acquired old rice plantations in the South Atlantic

Coastal Zone (SACZ) in the late 1930s, rice fields in this area have been managed to benefit

wildlife (Gordon et al. 1989). Midwinter waterfowl surveys conducted by United States Fish and

Wildlife Service (USFWS) revealed that on average, 30% of dabbling ducks in the Atlantic

Flyway wintered in South Carolina from 1954 to 1987 (Gordon et al. 1989). The SACZ also

served as important staging areas for migrating waterfowl due to its geographic location

(Bellrose 1980). Therefore, managing habitats for migrating and wintering waterfowl is

currently the primary goal of many land owners and public wildlife management areas (WMAs)

along the SACZ (Gordon et al. 1989).

Before introducing mottled ducks (Anas fulvigula) to the Santee River Delta and the ACE

(Ashepoo, Combahee, and Edisto Rivers) Basin of South Carolina from Texas, Louisiana, and

Florida (T. Strange, South Carolina Department of Natural Resources, unpublished data), this

management goal sufficed the major function of the coastal wetlands along the SACZ. However,

the mottled duck is a non-migratory dabbling duck (Bellrose 1980) that is predominantly

sedentary (Stutzenbaker 1988). A mottled duck may depend on the same environment from

hatching, fledging, wintering, and breeding for life. Management practices that provide winter

23

Page 37: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

food and habitat for waterfowl may not be optimal for mottled ducks in other seasons, especially

in June and July when peak numbers of flightless ducklings occur (Stutuzenbaker 1988).

Many researchers have suggested variables that determine waterfowl habitat selection.

Among the variables, food resources are critical for many stages in life history such as

reproduction (Lack 1967, Ryder 1970), growth of ducklings (Sedinger 1992, Cox et al. 1998),

molting (King 1980), and wintering (Joyner et al. 1984, Thompson and Baldassarre 1990) when

abundant energy and nutrients are needed. Vegetation structure is also an important factor

determining waterfowl habitat selection. A “hemi-marsh” with equal percentage of vegetation

coverage and open water attracts most dabbling ducks (Kaminski and Prince 1981), but each

different species has its own niche in vegetation-open water combinations (White and James

1978). Water depth is critical to waterfowl habitat selection because different species use

different feeding depths (White and James 1978). Even 5 to 10-cm change in water depth can

affect waterfowl use (Gordon et al. 1989).

Traditionally, however, habitat selection studies were based on the overall habitat

characteristics or measurements at random locations within a sampling unit such as an

impoundment instead the exact area occupied by birds (e.g., Murkin and Kadlec 1986, Cooper

and Anderson 1996). The variables measured by investigators may vary within the sampling unit.

For example, aquatic invertebrate composition, water depth, vegetation coverage, and salinity

may differ at various locations within a wetland. Waterfowl may concentrate on a specific and

small spot without using other areas in the vicinity. At Bear Island WMA, mottled ducks

repeatedly used certain locations in impoundments (G.-J. Weng, pers. obs.). Water depth in an

impoundment may vary over time due to management purposes such as widgeongrass (Ruppia

maritima) growth, algae control, mosquito control, etc. Average water depth over time may not

24

Page 38: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

reflect the water depth preferred by mottled ducks. Also, overall food abundance may not

represent food availability for waterfowl due to their behavior (Cooper and Anderson 1996) or

morphology (Batzer et al. 1993). Therefore, measuring the overall character of a sampling unit

may miss the exact habitat characters truly preferred by waterfowl. For habitats used by mottled

ducks, previous researches only provided general description of vegetation composition (White

and James 1978), water depth (Paulus 1984), and habitat types (rice fields, pasture and fallow

fields, ditches and canals, fresh and brackish water, etc.) (LaHart and Cornwell, 1969, Zwank et

al. 1989). There has been no study on the habitat characteristics chosen by mottled ducks.

The objective of this study was to investigate habitat characteristics preferred by mottled

ducks during summer in one of the managed wetlands where they were released 30 years ago,

hoping to provide suggestions for the management of this year-round residential species in

summer. Because during summer, ducks rely on high amounts of protein provided by aquatic

invertebrates for growth of broods (Sedinger 1992, Cox et al. 1998) and molting (King 1980),

this study also estimated abundance of aquatic invertebrates available for mottled ducks at the

study site.

METHODS

Bear Island WMA was part of the ACE Basin, located within the estuary of the Ashepoo

River, South Carolina, and was owned and operated by South Carolina Department of Natural

Resources (DNR). The 4,810-ha WMA consisted of 2,150 ha of 25 managed impoundments,

2,000 ha of tidal marsh, 490 ha of woodlands, and 160 ha of agricultural lands. The

impoundments were managed for widgeongrass, dwarf spikerush (Eleocharis parvula), and

saltmarsh bulrush (Scirpus robustus) to provide quality habitat for wintering waterfowl and other

wetland wildlife (D. Harrigal, pers. comm.).

25

Page 39: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Direct observations of mottled ducks were conducted using a 20-60x spotting scope from a

vehicle along dike roads in June and July 2003. Each of the 25 impoundments was surveyed in

one day, 3 days a week during 7:00 a.m. and 6:00 p.m. When mottled ducks were detected,

activities of ducks were observed using scan sampling method (Martin and Bateson 1986) until

they left. All individuals visible were rapidly scanned and activity of each individual at that

instant was recorded. Behaviors of ducks were broadly categorized as foraging, resting (standing

or sitting), locomotor, comfort movements (preening, flapping, bathing), and alert (Kaminski and

Prince 1981), but only the behavior performed by > 50% of the individuals was recorded for the

flock. Number of ducks, water depth, distance of ducks to the nearest vegetation, and percent of

vegetation coverage within a 5-m radius were also recorded. Distance to vegetation was

categorized as <5 m, 5-10 m, 10-20 m, 20-50 m, and >50 m. After ducks left, one aquatic

invertebrate sample was taken at the exact location of ducks. Only one sample was taken

because ducks usually occupied a small area (<10 m radius) and collecting multiple samples in a

small area may produce pseudo-replication (Hurlbert 1984). Water depth in some impoundments

was as ≤ 5 cm, therefore, aquatic invertebrates were sampled with a hand net (20 cm x 15 cm,

mesh size 0.5 mm). A 1-m-long, 15-cm deep sweep was taken along the surface of the water at

each location. When water depth was < 15 cm, the net dragged on the bottom of water and water

depth was measured to adjust the volume of the net sweep. The net sweep was limited to the

depth of 15 cm because tip-up (up-side-down) feeding behavior was never observed in this

research and deeper food resources were considered unavailable to mottled ducks. Therefore,

this sampling method revealed only the availability of aquatic invertebrates for mottled ducks,

similar to the approach used by Cooper and Anderson (1996). After a sample was collected at a

location of ducks, another sample was taken immediately at a random location 50-100 m away in

26

Page 40: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

the same or different impoundment where ducks were not observed. This approach of sampling

aimed to reveal the exact and real time characters of habitats used and not used by mottled ducks.

Sample locations were classified as used and unused. Used locations were those in which

ducks were observed ≥ 3 times regardless of the behaviors they exhibited to prevent a location

being used by chance. Only one sample was taken at each location. Unused locations were

those at which no ducks were recorded during the entire fieldwork period. Samples were

immediately preserved in 70% ethanol in the field until processed in the laboratory. Samples

were identified to the lowest taxonomic level possible using Brigham et al. (1982), Heard (1982),

Thorp and Covich (1991), and Merritt and Cummins (1996). In addition to aquatic invertebrates,

submerged plants, water depth, and number of ducks at each sample location were recorded.

Vegetation coverage of the impoundments used by mottled ducks was estimated by interpretation

of aerial photos and direct observation.

Because there was much variation in numbers of aquatic invertebrates and water depth

and sample size was small, a normal distribution could not be assumed for parametric tests. The

Wilcoxon 2-sample test (Sokal and Rohlf 1995) was used to test differences in densities (number

per liter) of aquatic invertebrates, except Chironomidae, and water depths between used and

unused locations as well as between locations with and without submersed vegetation.

Availability of Chironomidae was compared using average number per location because the

sampling method may not have captured bottom-dwelling species when water was > 15 cm and

density (number per liter) may not reflect their real abundance. Simple linear regression was

used to examine the correlation between water depth and availability of aquatic invertebrates.

Chi-square test was used to test correlation between presence of submersed vegetation and use

by mottled ducks.

27

Page 41: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

RESULTS

A total of 60 observations (flocks x times) of mottled ducks were recorded in 10 of the 25

impoundments available at Bear Island WMA and another 9 observations were recorded flying.

Mottled ducks were detected four to 21 times in 7 of the 10 impoundments where mottled ducks

were observed and only one time in each of the other three (Fig. 3.1). Most (45%) mottled ducks

were in small flocks (≤ 5 individuals) and the largest flock consisted of 38 birds (average = 7.9,

SE = 7.1). Feeding and locomotor were observed > 70% of the time (Fig. 3.2). Ducks were

close to vegetation (≤ 10 m) about 70% of the time (Fig. 3.3).

Seventeen used and 20 unused locations were sampled for aquatic invertebrates. Use at

each of the 17 locations was foraging. Widgeongrass was the only submersed vegetation found

in the impoundments. We did not detect correlations between presence of widgeongrass or

availability of any aquatic invertebrate taxa and locations used by mottled ducks (χ2 = 0.033, p =

0.856 for widgeongrass, p>0.05 for aquatic invertebrate taxa). For the seven impoundments used

by mottled ducks at least twice, emergent vegetation coverage ranged from 20% to 80% with an

average of 52% (SE = 22.1%). Water depth was greater (Wilcoxon 2-sample test, p = 0.012) at

locations not used by mottled ducks (average = 23.05 cm) than those used by mottled ducks

(average = 14.24 cm). Mottled ducks were never observed using ditches where water depth was

> 1 m.

Aquatic invertebrates were classified into four phyla and five classes; each taxon was

identified to different levels of classification. Small fish were also found in the impoundment

(Table 3.1). For taxa with low number of individuals (Oligochaeta, Palaemonidae,

Hydrophilidae, Ceratopogonidae, Heteroptera, Odonata, and Pelecypoda), samples were pooled

to increase sample sizes. The densities (numbers per liter) of eleven taxa of aquatic invertebrates,

28

Page 42: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

except Chironomidae, and one taxon of fish were compared between used and unused locations

(Table 3.1). The average availability of Chironomidae were not significantly different between

used and unused locations (p>0.05). Heteroptera, except Corixidae, were more abundant (p =

0.05) at locations unused by mottled ducks. Densities of other taxa were not different between

used and unused locations. Chironomidae were less abundant in deep water (p < 0.0001), but

water depth was not correlated with any other aquatic invertebrate availability (p>0.05) or total

aquatic invertebrate density (p = 0.165).

DISCUSSION

Mottled ducks used less than half of the impoundments at the Bear Island WMA (10 of 25

impoundments). The uneven distribution of mottled ducks in the 10 used impoundments

suggested strong preference of habitat by mottled ducks. Feeding was the most frequently

observed behavior in this study as it was in mottled ducks’ native habitats (Paulus 1984).

Locomotor behavior was observed more frequently at Bear Island WMA than at locations within

mottled ducks’ native range. A possible reason is that mottled ducks spent much time searching

for aquatic invertebrates and their behavior was determined at the instant when they were

observed. Therefore, in many occasions mottled ducks were recognized locomoting when they

were actually feeding. More locomotion time might reflect low densities of aquatic invertebrates,

but there are no available data on the relationship between food availability and locomotion time.

However, low numbers of mottled ducks at Bear Island WMA may make food a non-limiting

factor of the habitat for mottled ducks and allow mottled ducks to select habitat based on other

factors.

Total amount of submersed vegetation has been positively associated with waterfowl use of

an area (Joyner, 1980, McKinstry and Anderson 2002). Submersed vegetation provides habitat

29

Page 43: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

for epiphytic or phytophilous invertebrates (Downing 1986, Cyr and Downing 1988) and the

abundance of invertebrates is positively correlated with biomass of submersed vegetation

(Bergey et al. 1992). Aquatic invertebrates in turn are important food sources for waterfowl

(Evans and Kerbs 1977, as cited in McKinstry and Anderson 2002, Batzer and Wissinger 1996

and citations therein). Additionally, submersed vegetation is an important food source for

waterfowl. For example, waterfowl consume seeds of widgeongrass, sago pondweed

(Potamogeton pectinatus), and redhead grass (Potamogeton perfoliatus) (Perry and Uhler 1988,

Euliss et al. 1991, Cox and Kadlec 1995). In this research, the existence of widgeongrass was

only correlated with distribution of Heteroptera, but not Corixidae. However, Heteroptera was

rare at Bear Island WMA – only 10 individuals were found at five locations. Thus this result did

not show any biological significance. The lack of association between widgeongrass and

densities of aquatic invertebrates in this study may explain why mottled ducks did not show

preference for locations with widgeongrass, the only submersed vegetation found at Bear Island

WMA. Another possibility is that mottled ducks did not use widgeongrass as a food source at

Bear Island WMA in summer.

Hemi-marsh, a marsh with equal amount of open water and emergent vegetation coverage,

supports more waterfowl than more open or vegetated wetlands (Murkin et al. 1982). The

attraction of waterfowl to hemi-marsh has been attributed to higher aquatic invertebrate

abundance in hemi-marsh (Voigts 1976, Murkin et al. 1992). In this study, however, the

impoundments used by mottled ducks were covered by emergent vegetation in 20% to 80% of

the area and mottled ducks mostly stayed close to vegetation. This fact indicates that mottled

ducks may use the edges between open water and emergent vegetation of a wetland regardless of

the overall coverage by emergent vegetation. Probably, because this research was conducted in

30

Page 44: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

summer when mottled ducks were the only waterfowl using the impoundments, mottled ducks

could freely choose any locations with preferred vegetation in close proximity and/or other

habitat characters instead of selecting a hemi-marsh. During winter when abundant waterfowl

winter at Bear Island WMA, hemi-marsh may support more individuals because it provides more

open water-vegetation edges.

Waterfowl may selectively feed on certain aquatic invertebrates that are not the most

abundant at feeding sites (Batzer et al. 1993). Because the esophageal contents of mottled ducks

were not examined, it is not clear whether aquatic invertebrates consumed by mottled ducks were

correlated with their density at feeding sites. Because the size of flocks was small, however,

mottled ducks may selectively feed on certain invertebrate taxa without dramatically changing

their density. Hence, aquatic invertebrates may not be a limiting factor affecting the selection of

habitats by mottled ducks, and we did not detect a relationship between mottled ducks and

aquatic invertebrate densities among habitats.

McKinstry and Anderson (2002) found that puddle ducks used wetlands with deeper water

(mean = 1.51 m). In this research, water was deeper at unused than used locations, indicating a

preference for shallow (3-45 cm, average = 14.24 cm) water by mottled ducks. Among the

aquatic invertebrate taxa and widgeongrass, availability of Chironomidae was the only taxon that

was associated with water depth, with more abundant Chironomidae in shallow water. This

taxon exhibits diel vertical migration in vegetation. Some epiphytic species of Chironomidae

stay close to the bottom of water during daytime and move to the vegetation surface at night

(Marklund et al. 2001), probably due to the adaptation to the predation pressure or the reduced

number as a result of predation (Becket et al. 1992). In this study, availability of Chironomidae

was not different in used and unused locations by mottled ducks. Therefore, avoidance of

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predation or reduction by predation by mottled ducks was not a likely reason explaining lower

availability of Chironomidae in deeper water. Availability of Chironomidae was higher in

shallow water probably because the sampling method did not adequately collect benthic species

in deeper water and at the soil surface, indicating that in shallow water these food resources are

more readily available to mottled ducks than in deep water. Also, average water depth at

locations used by mottled ducks showed that free-swimming and benthic aquatic invertebrates

are both within the reach of mottled ducks.

Shallow water possibly also provides protection for mottled ducks against predators. Elsey

et al. (2004) found that the American alligator (Alligator mississippiensis) preys on mottled

ducks more frequently than previously realized. They collected alligators at shallow water

habitats preferred by mottled ducks during summer when flightless ducklings and molting adults

were present. Mottled duck remains were found in about 21% of alligators, far more frequent

than other studies conducted at deep-water areas in fall or winter (Elsey et al. 2004). Choosing

shallow water areas may provide mottled ducks more visual surveillance against predators such

as alligators because it is more difficult for alligators to hide and ambush mottled ducks from

shallow water. On the other hand, water depth preferred by mottled ducks in summer is usually

too low to support abundant alligators (Elsey et al. 2004).

Sampling at the exact locations and time of use revealed that mottled ducks selected certain

locations instead of overall characters of an impoundment. Future studies on habitat selection

may apply this approach and find more specific habitat characteristics preferred by waterfowl.

We found that water depth was the only factor associated with habitat preference by mottled

ducks at Bear Island WMA during summer. Aquatic invertebrates were not more abundant in

shallow water but shallow water ensured higher availability of aquatic invertebrates to mottled

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ducks. Management practices for this mottled duck population during summer do not need to

consider the density of aquatic invertebrates. Instead, water depth should be maintained at a

preferred level for mottled ducks. If management practices seek to increase the number of

mottled ducks, further researches should focus on why the mottled duck population was low at

Bear Island WMA.

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Table 3.1. Density of aquatic invertebrates and fish in locations used and unused by

mottled ducks at Bear Island Wildlife Management Area, South Carolina, June-July 2003.

P-values were the exact p-values from Wilcoxon 2-sample test.

Mean density (number/liter)

Phylum Class Order Family Unused (n=20) Used (n=17) p-value

Annelida Oligochaeta 0.46 0.47 0.935

Arthropoda Crustacea Conchostraca 33.93 50.58 0.635

Decapoda Palaemonidae 0.07 0.08 0.900

Arthropoda Insecta Coleoptera Hydrophilidae 0.42 1.34 0.388

Diptera Ceratopogonidae 0.59 0.19 0.658

Heteroptera Corixidae 1.84 8.93 0.306

others 0.11 0.00 0.050

Odonata Coenagrionidae 1.17 0.99 0.879

others 0.03 0.12 0.427

Mollusca Gastropoda 6.79 15.97 0.611

Pelecypoda 0.07 0.08 0.900

Total aquatic invertebrates 49.68 81.94 0.498

Chordata Actinopterygii Perciformes 1.64 2.29 0.370

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0

5

10

15

20

25

30

35

40

Mid

dle

Spr

ingf

ield

Blu

ff

Mos

quito

Shan

ty

Low

er H

og

Low

er P

ine

Cro

oked

cree

k

Sar

a

Hou

se

Impoundments

Freq

uenc

ies

of m

ottle

d du

cks

obse

rved

(%)

Figure 3.1. Frequencies of mottled ducks observed at 10 of 25 impoundments at Bear Island

Wildlife Management Area, South Carolina, June-July 2003. Frequencies were based on 60

observations (flocks x times).

35

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0

10

20

30

40

50

feeding locomotor resting comfort

Behavior

Freq

uenc

y (%

)

Figure 3.2. Frequencies of behaviors exhibited by mottled ducks at Bear

Island Wildlife Management Area, South Carolina, June-July 2003.

Frequencies were based on 60 observations (flocks x times). Resting

behavior included sitting and standing. Comfort behavior included

preening, flapping, and bathing.

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0

10

20

30

40

50

<5 5-10 10-20 20-50 >50

Distance to vegetation (m)

Freq

uenc

y (%

)

Figure 3.3. Frequencies of distance to nearest vegetation from mottled ducks at

Bear Island Wildlife Management Area, South Carolina, June-July 2003.

Frequencies were based on 60 observations (flocks x times).

37

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CHAPTER 4

POPULATION STRUCTUR AND GENE FLOW OF MOTTLED DUCKS WITNIN THE

SOUTH ATLANTIC COASTAL ZONE

INTRODUCION

Translocation is broadly defined as moving a living organism from one area and releasing it

freely in another (IUCN 2006). It has been used as a tool of conservation to increase genetic

diversity of small populations (Griffith et al. 1989, Newman and Tallmon 2001), establish

satellite populations to reduce the risk of extinction (Goodman 1987), or re-establish or augment

wild populations (Kleiman et al. 1991). However, without careful consideration, translocation

can be a threat to native species and ecosystems. For example, alien species have introduced

diseases or parasites to a new ecosystem (Dobson and May 1986, Szabo 2003), altered the

habitat (Danell 1979, Jackson 1988, Moore et al. 1999), and out-competed native species (Moyle

1973). For introduced species themselves, a small founder population size can result in

decreased genetic diversity, and interbreeding with native populations may cause extinction of

the species (Greig 1979, Hughes et al. 2003).

When a translocated population is self-sustainable, the translocation is considered

successful (Griffith et al. 1989). To establish a self-sustainable population, Foose (1991)

suggested that a conservation program should consider the kinds and amounts of genetic

diversity are to be preserved, and the period of time over which this genetic diversity is to be

maintained. To reduce the impacts of translocation on recipient ecosystems, the IUCN (2006)

suggested some critical considerations to be assessed before conducting a translocation. One is

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to consider capacity of the introduced species to reduce the genetic uniqueness of native species

by interbreeding with them. D’Antonio et al. (2001) also listed this consideration as one of the

top research questions that needs to be answered in this decade. These questions are hard to

answer before a translocation is conducted and very few translocations have been evaluated

during the whole process (Griffith et al. 1989). However, we can investigate these questions

from translocations with a known history.

The mottled duck (Anas fulvigula) is one of few non-migratory waterfowl species in North

America. The Florida mottled duck (A. f. fulvigula) and mottled duck (A. f. maculosa) in Texas

and Louisiana are considered two naturally-occurring subspecies (Bellrose 1980). Individuals

from these populations were captured and introduced to the Santee River Delta and the ACE

(Ashepoo, Combahee, and Edisto Rivers) Basin of South Carolina from 1975-1982. The

individuals were from Texas (126 birds), Louisiana (1,045 birds), and Florida (26 birds) (T.

Strange, South Carolina Department of Natural Resources, pers. comm.). The introduction was

driven by the desire to increase hunting opportunities in South Carolina. Impacts of this

translocation and establishment of mottled ducks on the introduced population per se and on

other native species were not considered.

The introduced mottled duck population was a small fraction of its source populations and

it has been isolated for about 30 years. Newly established populations in Georgia of mottled

ducks introduced to South Carolina may have experienced even more severe reduction in

population size (bottleneck) than those in South Carolina. Mottled ducks generally have a strong

sedentary nature; in a study by Stutzenbaker (1988), 82% of the birds in Texas and Louisiana

were shot in the county where they were banded. Breeding may thus be restricted within small

areas. Small and fragmented populations are expected to experience stronger genetic drift, loss

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of genetic diversity, and diversification than big populations (Frankham et al. 2002). Therefore,

the reduction in population size and sedentary nature of mottled ducks combined may have

caused genetic drift and reduced genetic diversity in the last 30 years.

Data collected from hunters’ harvests and monthly aerial surveys by the Georgia

Department of Natural Resources (DNR) from 2002-2005, identified a resident population of

mottled ducks on Rhetts Island, about 64 km north of the border between Georgia and Florida.

This southward expansion of the mottled duck population introduced to South Carolina (1975-

1982) is a great concern to ornithologists because of efforts to maintain the Florida mottled duck

as a genetically distinct subspecies (Florida Fish and Wildlife Conservation Commission 2006a).

Analyses of mitochondrial DNA of Louisiana-Texas and Florida mottled ducks did not detect

any gene flow between these populations (McCracken et al. 2001), supporting the idea that these

two populations are genetically distinct. South Carolina and Georgia mottled duck populations

are geographically near Florida so gene flow could occur. For example, shortly after the

introduction to South Carolina, a banded individual was found in Florida (U.S. Geological

Survey, Biological Resources Division, Patuxent Wildlife Research Center, Laurel, Maryland,

cited in McCracken et al. 2001). Thus, it is possible that the introduction of mottled ducks to the

South Atlantic Coastal Zone (SACZ) has broken the isolation of the Florida mottled duck

population.

If management and conservation goals for the Florida mottled duck population focus on

maintaining its status as a distinct subspecies, then we must be certain of its genetic composition,

especially relative to similar populations – the Louisiana-Texas and South Carolina-Georgia

populations. Hence, this research aimed to: 1) reveal genetic population structure of mottled

ducks in the five states where they occur, 2) reveal partition of genetic variation within and

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between populations, 3) compare genetic diversity and genetic distance between introduced and

source populations, 4) detect possible bottleneck effects on the introduced populations, and 5)

estimate the level and pattern of possible gene flow from Georgia-South Carolina to Florida.

METHODS

Sample Collection

From 2001 to 2005, whole ducks, wings, or feathers were collected from hunters at several

wildlife management areas (WMA) and from wildlife agencies that conducted banding work at

several national or state wildlife refuges (NWR or SWR) (Table 4.1). Samples from hunters

were collected during the hunting season from late November to late January or early February.

Samples from banding work were collected in summer. Sex and age (hatch year or after hatch

year) of some samples and possible hybrids (mallard [Anas playtyrhynchos] x mottled duck)

were identified by biologists who banded the ducks. Sample sources encompassed the entire

distribution and range of mottled ducks (Fig. 4.1).

Microsatellite Loci

Twenty-four primer sets developed for mallards by Fields and Scribner (1997) (Sfiµ 1, 3, 4,

5, and 7), Buchholz et al. (1998) (Bca 6, 11), and Maak et al. (2003) (APH02, 04, 05, 06, 08, 12,

13, 15-21, and 23-25) were modified and tested with respect to their utility on mottled ducks. All

primer sets were examined using Oligo 4.0 (Molecular Biology Insights Inc., West Cascade, CO)

for internal stability, secondary structure, primer-dimer formation, primer length, and agreement

of upper- and lower-primer melting temperatures. Primer pairs falling outside the range of

acceptable values were re-designed using the original sequence. A M13 reverse tag (5’-

GGAAACAGCTATGACCAT-3’) or CAG tag (5’-CAGTCGGGCGTCATCA-3’) (Schable et al.

2002) was added to the 5’ end of one of each primer pair using Oligo 4.0 (Molecular Biology

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Insights Inc., West Cascade, CO) to obtain the fewest secondary structures. Inclusion of the 5’

tag allowed use of a third primer in the PCR (fluorescently labeled M13 reverse or CAG for

detection on an ABI 3730; cf. Boutin-Ganache et al. 2001) for subsequent amplification. GTTT

“pigtails” were added to the 5’ end of each primer not possessing either the CAG or M13 reverse

tag to facilitate the non-templated addition of adenosine by Taq polymerase (Brownstein et al.

1996, Traxler et al. 2000).

DNA Extraction

DNA was isolated from muscle tissue or feather samples collected from each mottled duck.

DNA from muscle tissues was extracted using the DNeasy Tissue Kit (QIAGEN Inc., Valencia,

California) following the protocol provided by QIAGEN Inc. DNA from feather samples was

collected from the tip of two to five quills and was extracted following the Qiagen protocol with

addition of 0.100 g/ml of DTT (dithiothreitol) to the digestion step.

PCR reactions were carried out using a subset of the microsatellite primers identified

previously. PCR reactions were conducted on a peltier thermal cycler in a reaction mix

containing 0.1 µL Taq Polymerase; 1 µL Taq Reaction Buffer; 0.6 µL MgCl2 (25 mM); 1 µL

dNTP; 0.5 M of untagged primer; 0.05M of M13- or CAG-tagged primer; 0.45 M of

fluorescently labeled M13 or CAG tag (Integrated DNA Technologies, Coralville, IA); 4.8 µL

sterile, distilled water; and 1.5 µL template DNA for a final reaction volume of 10 µL. PCR

cycling was performed in a Bio-Rad Thermal Cycler (Bio-Rad, Hercules, California) with an

initial denaturation of 94°C for 1 min followed by 21 cycles of 96°C for 20 sec; 57°C or 65°C

(highest annealing temperature, Ta) for 30 sec minus 0.5°C per each annealing cycle; and 72°C

for 1 min followed by 15 cycles of 96°C for 20 sec; 47°C for 30 sec; 72°C for 30 sec with a final

extension period of 10 min at 72°C.

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Fragment analysis was conducted on an Applied Biosystems 3730 DNA Analyzer (Perkin

Elmer Applied Biosystems, Norwalk, Connecticut). Fragment size data were extracted from the

sequencer, and alleles were sized and binned using the GeneMapper™ program (Perkin Elmer

Applied Biosystems, Norwalk, Connecticut). The ROX500™ standard (Perkin Elmer Applied

Biosystems, Norwalk, Connecticut) was included as an in-lane size standard for each run of 96

samples, and negative and positive controls were included in 2 lanes of each scoring run.

Twenty samples, from among those already analyzed, were selected at random for re-scoring to

ensure that consistency was maintained among analyses.

Statistical Analysis

Because spatial and temporal sampling scenarios will affect interpretation of the population

structure, ideally, each sample should represent a deme (breeding unit) and belong to the same

cohort for organisms with overlapping generations (Balloux and Lugon-Moulin 2002). Without

a priori information on the boundaries of demes, all the samples from different locations and

seasons were analyzed separately before they were clustered to reveal population structure. Tests

of Hardy-Weinberg Equilibrium (HWE) and linkage disequilibrium were conducted for each

locus and sample using Genepop ver. 3.4 (updated version of Raymond and Rousset 1995). FST

values for each pair of samples from the same locations were calculated in GENALEX 6

(Peakall and Smouse 2006) using an AMOVA (Analysis of Molecular Variance) -based estimate

because unequal sample size is accounted for in AMOVA in the computation of variance

components and in the permutation-based testing procedure (Excoffier et al. 1992, Excoffier,

pers. comm.). Weir and Cockerham’s (1984) estimator of FST was not used because their

estimator assumes equal population size. Samples from the same location but different seasons

or from different units in the same area were combined if the FST value was not significantly

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different from zero at alpha = 0.05 via permutation. Possible hybrids identified by wildlife

biologists based on plumage were combined with other individuals from the same locations if

possible hybrids were not different from other individuals (FST = 0). All simultaneous tests were

adjusted for p-values using sequential Bonferroni correction (Rice 1989). Sequential Bonferroni

correction begins with a predetermined significance level divided by number of simultaneous

tests. For example, if significance level is alpha = 0.05 and number of simultaneous tests is 10,

then the correction begins with 0.05/10 = 0.005. If the smallest p-value of the 10 tests is smaller

than 0.005, then the test is significant at alpha = 0.05. After the test with the smallest p-value is

corrected, 9 tests are remained to be corrected and the next corrected p-value is 0.05/9 = 0.0056.

If the smallest p-value of the 9 tests is smaller than 0.0056, then the test is significant at alpha =

0.05. The procedure continues until all the tests are corrected, and the final p-value (the largest

one in the 10 tests) should be compared with 0.05/1 = 0.05. For the HWE tests, there were 225

(25 samples x 9 loci = 225) simultaneous tests and the initial significance level would be

extremely small (0.05/225 = 0.0002) if sequential Bonferroni correction (Rice 1989) was strictly

followed. With such a small significance level, it is virtually impossible to detect any deviation

from HWE due to the conservative procedure. Therefore, sequential Bonferroni correction was

conducted within each locus across 25 samples, and the initial significance level was adjusted to

0.002 (= 0.05/25). For the linkage disequilibrium tests, the same rationale was applied and a

sequential Bonferroni correction was conducted within each sample across all the pair-wise

combinations of loci. There were 36 pair-wise combinations of loci and the initial significance

level was adjusted to alpha = 0.0014 (0.05/36).

Because the populations of mottled ducks introduced to South Carolina have been

separated from source populations for only 30 years and microsatellite DNA is virtually neutral

44

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to selection, mutation and selection were negligible as evolutionary forces to change

distributions of allele frequencies in these populations. Genetic drift would be the primary

evolutionary force to possibly change gene frequencies since the introduction of mottled ducks to

South Carolina. Therefore, the Reynold et al. (1983) FST-based genetic distance (D = - log (1-

FST)) was calculated for each pair of samples using GDA (Genetic Data Analysis) ver. 1.1

(updated version of Lewis and Zaykin 2001) because this measurement is appropriate for

divergence due to drift only and approximately proportional to the divergence time (p.197 in

Weir 1996). Populations were then clustered to build a phenogram using the widely-used

UPGMA (Unweighted Pair Group Method using Arithmetic averaging, Sneath and Sokal 1973).

The UPGMA approach has been modified and used by Holsinger and Mason-Gamer (1996) and

Gibbs et al. (2000). Gibbs et al. (2000) recalculated FST for each new cluster during the

construction of the phenogram. In this research, FST was not recalculated because treating

members in the same cluster as one single population and recalculating FST does not make

biological sense. The phenogram reflects the hierarchical relationship among populations but not

exact divergence time between any two populations or clusters. The significance of the

phenogram was tested at each level of the cluster with FST using GENALEX 6 and log likelihood

ratio (G) based exact test (Goudet et al. 1996) using GENEPOP ver. 3.4. The G-based test has

higher power than other exact tests of differentiation when sample sizes are unbalanced (Goudet

et al. 1996) and is robust for microsatellite data (Ryman et al. 2006). Members of the same

cluster were further combined if they were geographically close to each other but not

significantly differentiated. FST values and G-based tests were calculated again at each level of

clustering. The process continued until members in each cluster were significantly differentiated

or not continuous in distribution. The same grouping of populations was used to construct

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population structure using Neighbor-Joining method (Saitou and Nei 1987) in MEGA 3.1

(Kumar et al. 2004). This procedure inevitably increased FIS and heterozygosity deficiency in

each newly defined population, but the purpose of the procedure was not to define perfect

breeding units. The advantage of this procedure is that it does not arbitrarily assume boundaries

of populations and reveals and simplifies population structure naturally. The populations along

SACZ were examined for the pattern of isolation by distance by plotting log10(number of

migrants) against log10(geographic distance) according to Slatkin (1993) to detect the interaction

of gene flow and genetic drift. The significance of isolation by distance was tested with a Mantel

test (Mantel 1967) using GENALEX 6. Estimation of the number of migrants is stated below.

The following analyses were based on the newly defined populations (see results) and their

structure.

The newly defined populations were compared for observed heterozygosity and unbiased

estimate of expected heterozygosity using GDA ver. 1.1 and average number of alleles across

loci and average number of private alleles across loci using GENALEX 6. The populations were

also compared for the expected number of alleles per locus (allelic richness) using the rarefaction

method (Hurlbert 1971) in FSTAT ver. 1.2 (Goudet 1995) to relieve the effect of sample size

(Mousadik and Petit 1996, Petit et al. 1998, Leberg 2002). This method provides an unbiased

estimate of allelic richness and the greatest statistical power to detect differences in variation

(Leberg 2002).

The newly defined populations were sorted into three groups: Texas-Louisiana, Florida,

and Georgia-South Carolina to represent two sub-species and an introduced population,

respectively. Pair-wise FST and partition of the total genetic variance due to among-group

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differences and within-group differences were calculated using the analysis of molecular

variance (AMOVA, Excoffier et al. 1992) in GENALEX 6.

To detect possible bottleneck or population expansion events in the newly established

populations in the SACZ, four approaches for microsatellite data were applied to ensure that all

information in the data was used. Cornuet and Luikart (1996) compared the expected

heterozygosity under mutation-drift equilibrium and observed heterozygosity computed from

samples to detect a reduction of effective population size. If a population has experienced a

bottleneck event, allele number is reduced faster than heterozygosity (Nei et al. 1975) because

rare alleles are lost first but they contribute very little to heterozygosity and excess of

heterozygosity would be observed, but this excess will persist only a few generations until new

mutation-drift equilibrium is reached. Tests were performed using the Bottleneck program

(Cornuet and Luikart 1996) with a two-phased mutation model (variance = 30%, proportion of

stepwise mutation model = 70%) and Wilcoxon sign-rank test as suggested by authors in the

documentation for the software.

Reich and Goldstein (1998) developed two statistical tests to detect population expansion.

The expected distribution of allele lengths of a population at mutation-drift equilibrium is

multimodal and heavy-tailed, but for a population that experienced recent expansion, the

distribution tends to be unimodel. This deviation from an expected distribution is detected by a

k-test, or equivalently kurtosis. The kurtosis was calculated for each locus, and the significance

of the proportion of positive k values was based on a binomial distribution with the probability of

a positive k set as 0.515 (Reich et al. 1999). The second test, g-test, is based on the expectation

that the variance of the variance of an allele length distribution is larger for constant-sized

populations than expanding ones assuming the loci follow a stepwise mutation model (Kimura

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and Ohta 1978). Significance levels for the g-test were given in Reich et al. (1999). Both tests

were performed using programs written in the SAS language (SAS Institute Inc., Cary, NC).

Kimmel et al. (1998) derived the imbalance index (β) using the observed variance in allele

size for a given locus and expected homozygosity for the same locus. Populations that have been

stable for long periods of time have β values close to 1.0, while populations that recently

experienced a bottleneck then expanded are predicted to have β values greater than 1.0. Finally,

Garza and Williamson’s (2001) M value was used to detect reductions in population size. The M

value is the ratio of the number of alleles to the range in allele size. This value decreases when a

population is reduced in size because number of alleles is lost faster than the range in allele size

(Garza and Williamson 2001).

For the detection of possible gene flow, Slatkin’s (1985) private-allele method conducted in

GENEPOP ver. 3.4 and Wright’s FST conducted in GENALEX 6 were used to estimate average

number of migrants between each pair of populations per generation. Migrants were defined as

individuals that move between different populations. The private-allele method uses the

logarithm of the average frequency of private alleles to estimate the average number of migrants

exchanged between populations. This method is not sensitive to the geometries of populations

and is a rough way to correct for differences in sample size (Slatkin 1985). For a FST-based

estimate, average number of migrants per generation is M = (1 – FST )/(4FST). Although the

indirect measure of gene flow based on FST relies on many unrealistic assumptions (Whitlock

and McCauley 1999), no alternative strategy is clearly superior to this approach (Neigel 1997).

Slatkin and Barton (1989) compared both methods and concluded that both methods provide a

reasonably accurate estimate of the average number of migrants under a wide variety of

conditions, but they considered FST more useful than the private-allele method in that FST is less

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sensitive to electrophoretic errors and uses more information than private-allele method. For

samples with sex and age information, sex-biased and age-biased gene flow was tested using the

assignment test in GENALEX 6 (Peakall and Smouse 2006). Although dispersal is not equal to

gene flow, it is a prerequisite before gene flow occurs. Sex-biased and age-biased gene flow was

therefore interpreted from sex or age-biased dispersal. The assignment test was based on Favre

et al. (1997). A log likelihood assignment index was calculated for each individual. Then, an

Assignment Index correction (AIc) was calculated by deducting the mean log likelihood of the

population from each individual log likelihood. A negative AIc value indicates an individual is

likely an immigrant. Average AIc values of sex and age categories were then compared to detect

biased gene flow.

RESULTS

Hardy-Weinberg Equilibrium and Linkage Disequilibrium

Eight hundred and seven birds were collected from 25 locations x season combinations

(Table 4.1). Nine primer sets modified from Maak et al. (2003) were used for final genotyping

out of 24 sets tested (Table 4.2). All of the nine microsatellite loci were polymorphic, with a

mean number of alleles per locus of 15.2 (Table 4.3) across the 10 newly defined populations

(see below and Fig. 4.1). Average expected heterozygosity was 0.733, and average inbreeding

coefficient was 0.127 (Table 4.3). After the modified sequential Bonferroni correction, six of

nine loci deviated from HWE in one to nine samples (Table 4.4). Three loci (APH08, APH15,

and APH18) did not deviate from HWE and four loci (APH04, APH05, APH17, and APH24)

deviated from HWE in three or fewer samples (Table 4.4). For significance level at alpha = 0.05,

it is reasonable to see one or two out of 25 samples deviate from HWE (25 x 0.05 = 1.25) if the

null hypothesis is, all the samples follow HWE. Therefore, APH17 and APH05 did not

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significantly deviate from HWE, and APH04 marginally deviated from HWE (Table 4.4). Only

APH02 and APH21 significantly deviated from HWE (Table 4.4). Except for APH21, deviations

from HWE were separated in two subspecies; APH02 deviated from HWE in TX-LA samples or

GA-SC samples that were descendents of TX-LA mottled ducks; APH04 deviated from HWE in

FL samples only (Table 4.4). Linkage disequilibrium of samples for any pair-wise combination

of loci was not detected. The following statistical analyses do not assume HWE. Therefore the

deviation from HWE at APH02 and APH21 did not affect the results.

Population Differentiation and Structure

Possible hybrids identified by wildlife biologists based on plumage were not different from

other individuals collected in the same area (FST = 0). Birds collected from the same

management area or refuge at different times or in different units were also not distinguishable

(FST = 0). Therefore, all birds from the same management area or refuge were combined into 14

populations (Fig. 4.1). These 14 populations were further grouped into 10 populations according

to the procedure described in methods (Table 4.5, Fig. 4.1). The UPGMA and Neighbor-Joining

methods showed similar population structure (Fig. 4.2, 4.3). The populations from TX-LA and

GA-SC were clearly separated from FL populations, except the Guana population was in the TX-

LA cluster (Fig. 4.2 and 4.3). The structure reflects the geographical relationship among

populations (Fig. 4.1) and the origin of the introduced populations. The introduced mottled

ducks were released in the SCR and ACE Basin where Bear Island WMA is located. The

structure indicates that SCR and Bear populations are genetically closest to TX and LA

populations, and the SCR population is genetically closer to the LA population than the TX

population. Along the SACZ, populations geographically closer to SCR were also genetically

closer to the SCR population. One discrepancy between FST and G-based tests was detected at

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the cluster composed of LA, TX, and SCR populations (Fig. 4.2). Except for the Brevard-Duda

cluster, every cluster had a weak but significant population structure according to the G-based

test. Pairs of populations were either weakly differentiated or not significantly differentiated,

and FST ranged from < 0.001 to 0.052 (Table 4.6). The discrepancies between the two

measurements of population differentiation were between pairs of SCR-Duda, Bear-Rhetts,

Rhetts-Duda, Brevard-IMC, Brevard-Orange, Duda-Orange, and IMC-Orange. The pattern of

isolation by distance for the four populations (SCR, Bear, Rhetts, and Guana) along SACZ was

apparent, revealed by log10(number of migrants) plotted against log10(geographic distance) with

an R2 value of 0.126 (Fig 4.4). The FST and G-based p-values for all Florida populations were

0.030 and p < 0.0001, respectively. The FST for introduced populations was not significantly

different from zero and p-value for the G-based test was 0.0557. Hence, both tests indicated the

introduced populations were not significantly differentiated. The overall FST was 0.022 (p < 0.01)

and p < 0.0001 for the G-based test, indicating significant but weak differentiation for all the

mottled duck populations.

Genetic Variability

The genetic characteristics of the nine microsatellite loci in the ten populations of mottled

ducks were described (Table 4.7) and all populations had high and homogeneous levels of

expected heterozygosity (average = 0.721, SE = 0.017) across loci (Fig. 4.5). The expected

heterozygosity for TX-LA and GA-SC populations (average = 0.729, SE = 0.017) was not

significantly different from that of Florida populations (average = 0.712, SE = 0.014). Observed

heterozygosities were all lower than and roughly parallel to the expected ones (Fig. 4.5), except

the Duda population, indicating homogeneous inbreeding coefficient (FIS) among the populations

(average = 0.117, SE = 0.035). Number of alleles per locus reflected the sample size for each

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population, but after adjusted for sample size at N = 25, all TX-LA and GA-SC populations had

higher allelic richness (average = 6.24, SE = 0.25) than Florida population (average = 5.30, SE =

0.34) (Fig. 4.5). Private alleles were observed in Guana, Brevard, IMC, LA, and TX. None of

the introduced populations had private alleles, although their allelic richness was higher than

Guana, Brevard, and IMC populations. The FST values were 0.021, 0.004, and 0.025 between

GA-SC and Florida, GA-SC and TX-LA, and Florida and TX-LA populations, respectively. The

FST between GA-SC and Florida and FST between Florida and TX-LA were significantly different

from zero at p = 0.01. AMOVA tests indicated that only 1.9% of the total genetic variance was

due to differences among the three groups of mottled duck populations in TX-LA, GA-SC, and

Florida (Table 4.8). Most (98.1%) of the genetic variance was due to differences within

populations (Table 4.8).

Bottleneck Events

Tests of bottleneck events in the mottled duck populations by different methods revealed

variable results (Table 4.9). Wilcoxon sign-rank tests suggested possible bottleneck history in

Rhetts, IMC, and Orange populations. Because the k-test is based on a binomial distribution and

nine loci, conventional significance levels (alpha = 0.05 or 0.01) are not available and the most

appropriate significance level is alpha = 0.07 with corresponding k-test value of 2. Each

population had four or more numbers of positive k-values, thus none of the populations had a

sign of population expansion. The values for the g-test were larger than any critical values in the

table provided by Reich et al. (1999), indicating the populations have not experienced recent

expansion in size. On the contrary, all the beta-values were much larger than 1.0, indicating all

the populations had a recent bottleneck history. All populations had homogeneous M-value

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around 0.4, which also strongly indicates recent bottleneck events according to Garza and

Williamson (2001).

Number of Migrants

Estimated numbers of migrants between each pair of populations were one or more per

generation (Table 4.10). Tests on sex- and age-biased dispersal were done on Brevard, TX, and

LA populations that had reasonable sample size for the tests. AIc values showed equal

probabilities for individuals in different sex or age categories to be assigned in the same

population, indicating that there was no significant sex- or age-biased dispersal (Fig. 4.6).

DISCUSSION

Population Structure

The ten newly defined mottled duck populations (Table 4.5, Fig. 4.1 and 4.2) reflected a

shallow but clear genetic structure. The structure is shallow because the FST value at each level

of clustering is very small. Conventionally, a FST value in the range 0-0.05 indicates little

genetic differentiation, but none of the FST values in this research exceeded 0.05. However, FST,

or other parameters such as GST that estimate the relative amounts of between-population and

total diversity, is inherently dependent on the level of genetic diversity; higher level of diversity

results in lower value of the parameter even if absolute divergence is high (Nagylaki 1998, Nei

1987, p.190). For example, Jin and Chakraborty (1995) showed analytically that for completely

isolated populations, the value of GST ranges from zero to unity depending on the amount of

variation (or mutation rate). For highly polymorphic markers such as microsatellite loci, FST

may thus be deflated because of the reduced level of homozygosity (Wright 1978, Charlesworth

1998, Hedrick 1999) and underestimate differentiation in highly structured populations (Balloux

and Lugon-Moulin 2002). Therefore, a low value of FST may suggest significant genetic

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differentiation. Loci used in this research have a high value of expected heterozygosity (average

= 0.733), which may reduce the estimates of FST. On the other hand, with highly polymorphic

loci, statistically significant differences can be easily detected, but they may not be translated

directly to significantly biological differences (Hedrick 1999). Thus the mottled duck

populations may differentiate more than the FST values appear but may not as significant as the

p-values suggest.

On the contrary, bottleneck events can largely increase genetic distance among populations

due to reduced heterozygosity in populations that have experienced bottleneck events (Hedrick

1999). Possible bottleneck events were restricted to three populations only (see below), and one

of these populations (the IMC population) was not significantly differentiated from its

neighboring populations. Therefore, genetic distance measurement in this research was

minimally affected by bottleneck events.

The genetic structure is especially ambiguous in Florida for populations south to the

Orange population. The G-based test p-values for each pair of the populations and for the cluster

were not significant after sequential Bonferroni correction. Discrepancies between FST and G-

based tests for Brevard-IMC, Brevard-Orange, Duda-Orange, and IMC-Orange populations also

reflect the unclear population genetic structure in Florida south to the Orange population. This

result agrees with Williams et al. (2002) that Florida mottled ducks do not have significant

genetic structure. But Williams et al. (2002) did not collect mottled ducks from northern Florida

where significant differentiation was found in this research. Except for populations south to the

Orange population, clear hierarchical structure among populations along the SACZ is in

accordance with the geographic distance among the populations. The structure was also

supported by the apparent pattern of isolation by distance. Compared with the example of

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glaucous wing gull (Larus glaucescens) on the west coast of North America in Slatkin (1993),

the patterns of isolation by distance for the two coastal bird species, mottled duck and glaucous

wing gull, are very similar, and the results suggest that the mottled duck is at an approximate

equilibrium under genetic drift and high level of gene flow, although the dispersal distance is not

far enough to homogenize populations along the SACZ.

It was interesting to see that the Guana population (A. f. fulvigula) appears in the same

cluster with another subspecies, the TX-LA and GA-SC populations (A. f. maculosa). Two

possible reasons can explain this similarity between two subspecies across the border of Georgia

and Florida: (1) the similarity can be due to recent common ancestry for the GA-SC population

and Guana population, namely the Guana population was probably established by mottled ducks

from GA-SC, and (2) high levels of gene flow have homogenized microsatellite DNA in the

Guana and GA-SC populations. However, private alleles were found in the Guana population

but not in any GA-SC populations, suggesting that the Guana population has a longer history

than GA-SC population. Therefore, the Guana population should be originally A. f. fulvigula and

have evolved independently from another subspecies. Gene flow is thus the only possible reason

to explain the similarity. The current mottled duck population in Guana should be a mixture of

two subspecies. Importantly, the Guana population has private alleles but GA-SC populations do

not, indicating that gene flow should be directionally from GA-SC to Florida.

Source and Introduced Populations

One of the concerns for a successful translocation is the preservation of genetic variability

for a certain length of time (Foose 1991). Selection, mutation, and genetic drift are three major

evolutionary forces to change the genetic composition in a population. Selection is not

applicable in this research because microsatellite DNA is not subject to selection. The

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introduced populations did not have any private alleles, indicating that 30 years were not long

enough for mutation to change the allelic composition. Thus mutation can be safely ignored in

this research as stated in the methodology. Genetic drift is therefore the only possible

evolutionary force to change genetic composition or distribution of allele frequencies of mottled

duck populations in these 30 years. But even after 30 years of isolation, both pair-wise FST and

G-based test did not detect significant differences between the SCR population and its source

populations in Texas and Louisiana. Discrepancy between FST and G-based tests for the cluster

composed of SCR, LA, and TX populations was likely because the SCR population was a

mixture of LA and TX populations and the FST did not detect differentiation between them. With

87% of the introduced mottled ducks from Louisiana, the SCR population is still genetically

closest to the Louisiana population, followed by the Texas population. All of the GA-SC and

TX-LA populations were in the same cluster. Although 2% of the introduced mottled ducks were

from Florida (the Brevard population in this research), the genetic structure did not show any

similarity between GA-SC and the Brevard populations. Therefore, genetic drift has not

significantly changed genetic composition of the SCR population. The genetic variability and

distribution of allele frequencies of the introduced population have been well preserved in the

SCR for 30 years.

However, the genetic structure suggests that the genetic composition of the Bear and Rhetts

populations have drifted away from the original population. It is not clear how the 1,197 mottled

ducks were partitioned into the SCR and ACE Basin where the Bear Island is located, but the

occurrence of genetic drift likely was due to the small size of the Bear and Rhetts populations

relative to the SCR population because genetic drift is a stronger force to change allele

frequencies in small populations than in large populations (Frankham et al. 2002). The relatively

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small population sizes of the Bear and Rhetts populations have allowed genetic drift to be

observed in 30 years.

Genetic Variability among Populations

Expected heterozygosity (He) is a conventional choice for measuring overall genetic

variation because it combines information on both number of alleles and their relative

frequencies (Hedrick et al. 1986). Homogeneous He values among mottled duck populations

showed equally variable genetic composition. However, He is correlated to number of alleles

and number of alleles varies with sample size. Therefore, adjusted number of alleles per locus or

allelic richness can be used as another indicator of genetic variability. In contrast to He values,

allelic richness was higher in TX-LA populations and their descendents in Georgia and South

Carolina than populations in Florida. The higher allelic richness can be explained by the fact that

difference in allelic richness is due to the private alleles in each population because common

alleles will not make any difference in allelic richness, and rare alleles contribute very little to He

because of their low frequencies. This difference can occur by chance, or it can suggest that the

subspecies in Texas and Louisiana probably have a longer history and/or larger population size

so that more alleles evolved. Another possibility is that mottled ducks in Florida had more

unstable demographic history such as bottleneck events (see below) than another subspecies in

Texas and Louisiana, and allelic richness was lost faster than He in the fluctuation of population

size (McCommas and Bryant 1990, Leberg 1992). However, private alleles in both subspecies

demonstrate that the two subspecies have been isolated from each other to some extent.

The FST value between TX-LA and Florida populations showed that only 2.5% of the

genetic variation was apportioned between the native populations of the two subspecies.

McCracken et al. (2001) detected 1.1 % of the mitochondrial DNA (mtDNA) variation

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partitioned between Florida and TX-LA populations, and Williams et al. (2005) found 1 % and

5.4 % of the allozyme and microsatellite DNA variation, respectively, was partitioned between

Florida and Texas mottled ducks. Not surprisingly, microsatelite DNA exhibit a higher level of

differentiation than mtDNA and allozymes because of its higher mutation rate and neutrality to

selection even though the effective population size for mtDNA is fourfold that for autosomal

markers (Birky et al. 1989). Although the results vary among markers, results from this and

earlier studies showed low levels of differentiation between the two subspecies of mottled ducks.

This “shallow” population genetic structure has been observed on many species complexes

in the southeastern U.S. Avise (1996) illustrated several examples of species endemic to the

Florida peninsula that also exhibit mtDNA divergence between them and their taxonomic

counterpart on the main body of the continent, and many coastal species across a variety of taxa

with disjunct Atlantic and Gulf populations have shown mtDNA divergence also (Avise 1996 and

examples therein). However, not all species exhibited clear genetic differentiation. For species

with a lack of pronounced population differentiation, such as mottled ducks in this research,

similarity between populations may be due to contemporary gene flow or to retention of

ancestral polymorphisms in relatively short evolutionary time (Avise 1996).

With only two populations, it is hard to determine the relative contribution of gene flow

and recent isolation to the current similarity between populations. However, the introduced

population in Georgia and South Carolina has served as a reference to see how fast or how close

the two mottled duck subspecies could converge if gene flow has occurred. The GA-SC

population was originally from the subspecies in Texas and Louisiana. As mentioned previously,

within 30 years, it is expected that only genetic drift will change the composition of

microsatellite DNA. If there is no gene flow between any two of the groups, the FST value

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between Florida and GA-SC populations should be equal to or larger than that between Florida

and TX-LA populations because the smaller population size in GA-SC may enhance the extent of

genetic drift and inflate FST values. However, the FST value between Florida and GA-SC

populations is smaller than that between Florida and Texas-Louisiana populations. For two

completely isolated populations, it is virtually impossible for the FST value to decline over time

by genetic drift.

The smaller FST value between Florida and GA-SC populations might be due to that 30

years ago, 2% mottled ducks in South Carolina were from Florida. If the 2% of mottled ducks

from Florida have contributed to the reduction of FST, then it is expected to see a larger FST value

between Florida and Rhetts or Bear populations because Rhetts and Bear populations have

experienced genetic drift as mentioned earlier. In contrast to the expectation, the smallest pair-

wise FST value between any Florida and GA-SC populations happened in Rhetts and Guana

populations. This fact demonstrates that the mottled ducks from Florida in the introduced

population did not make FST value between Florida and GA-SC smaller than that between

Florida and Texas-Louisiana populations.

Therefore, gene flow have occurred between Florida and GA-SC populations after mottled

ducks were introduced, and gene flow is most likely to occur between Rhetts and Guana

populations where smallest FST value was observed. Because the reduction of FST can be

observed in this short period of time, gene flow would have homogenized the two subspecies

(FST = 0) if gene flow had occurred between Florida and Texas-Louisiana populations. Thus the

similarity between the two subspecies should be due to a short history of isolation instead of

gene flow.

Bottleneck Events

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Although the results were incongruent among the four tests for bottleneck events, each test

had homogeneous results for each population. This suggests that all the populations had similar

demographic history, and the bottleneck events were either ubiquitous or did not occur in all the

populations. It is not reasonable to suggest that all the populations had experienced bottleneck

events because severe decline in population size of TX-LA and FL populations have not been

documented. Consequences of bottleneck events on the genetic composition can be erased in a

few generations if the gene flow level is high because heterozygosity is restored quickly (Keller

et al. 2001). Without gene flow, the effects of bottleneck may last thousands of generations or on

the order of 1/u generations, where u is the mutation rate (Nei et al. 1975). If the mottled duck

populations in SACZ are not completely isolated from each other, bottleneck history may not be

resolved due to gene flow.

Assumptions for the four tests can also affect the results. The statistics, except M-value,

can only detect population bottleneck or expansion events that occurred a long time ago so that

allele number, frequency, size range, and distribution have been changed by mutation to some

extent. In this study, however, bottleneck events occurred due to the translocation of mottled

ducks are the major concern, and the history of the introduced populations is about 30 years only.

For these statistics, complete isolation among populations is assumed and the populations should

be at mutation-drift equilibrium before and after the bottleneck events. Also, the change in

population size assumed in the tests is dramatic (> 100 fold). More specifically, Reich et al.

(1999) suggested using 30 or more loci to achieve powers of 0.5 for the k-test and the g-test.

Thus the k-test and the g-test failed to detect any bottleneck events, possibly due to the number

of loci (9) used in this research. Spong and Hellborg (2002) also found these two tests failed to

detect known, moderate bottleneck events in a Scandinavian lynx (Lynx lynx) population. The

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simulation-based beta-value and M-value depend on parameters such as pre-bottleneck,

bottleneck, and final population sizes as well as the mutation rate in the simulation (Kimmel et al.

1998, Garza and Williamson 2001), making application in real cases difficult. Therefore, these

tests may or may not suitable for the short-term demographic history of the mottled ducks in the

SACZ. The Wilcoxon sign-rank test is a more reasonable approach for this research.

Analysis with eight highly polymorphic microsatellite loci is sufficient to detect a recent

bottleneck event using Wilcoxon sign-rank test (Spencer et al. 2000). It is thus expected to

reveal bottleneck events with nine highly polymorphic loci. The Wilcoxon sign-rank tests

showed possible bottleneck history in Rhetts, IMC, and Orange populations. This result is also

supported indirectly by the beta-value. If LA and TX populations are assumed to be stable for a

long time and their beta-value is a reference, then Rhetts, IMC, and Orange populations have

significantly larger beta-values, indicating possible recent bottleneck events. The Rhetts

population was the southernmost breeding population established by the mottled ducks from

South Carolina (see Chapter I) and was the most possible population to have low number of

founder individuals. As discussed previously, allelic richness is sensitive to bottleneck events.

The Orange population has the lowest allelic richness among all mottled duck populations and it

did not have any private alleles. The IMC population has the second lowest allelic richness,

although by a slight difference, and a very low average number of private alleles. These facts,

combined with the two bottleneck tests, suggest that the three mottled duck populations had

recently experienced bottleneck events.

Gene Flow

Interpreting gene flow between two closely related subspecies is difficult because the low

amount of variation partitioned between populations may indicate that populations have not been

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isolated long enough or that high level of gene flow has occurred. However, clear hierarchical

genetic structure and isolation by distance of mottled ducks along SACZ, close relationship

between Guana and TX-LA mottled duck populations, the smallest FST value observed between

Guana and Rhetts populations, and private alleles possessed by Guana population as well as

harvest data in Chapter I indicate that the Guana population was a mixture of Florida and TX-LA

mottled ducks and gene flow was directional from GA-SC to Florida. It may not make much

sense to estimate number of migrants between the introduced populations in SACZ and their

source populations in TX and LA because gene flow between the two groups of mottled ducks is

virtually impossible and sharing the same origin makes the estimate lack of biological

significance, but the results from both FST and private allele methods showed how similar they

are after the separation.

Williams et al. (2002) questioned whether the current gene flow among Florida mottled

duck populations is similar to or higher than the historical levels. If gene flow has been at this

high level for a long time, then random, short-range dispersal or lack of natal philopatry should

be the mechanism to cause gene flow. If the current gene flow is more intensive than the

historical level, then the change in land use may be the mechanism to deteriorate habitat quality

and force individuals to disperse (Williams et al. 2002). Because mottled ducks exhibit a high

rate of gene flow in all habitats where they occur, the contemporary gene flow should be similar

to the historical level. Mottled ducks have a potential to disperse despite their non-migratory

nature and small home range (Stutzenbaker 1988), and the dispersal is not sex or age-biased as

revealed in this research. Although this conflicts with mottled ducks’ presumed sedentary nature

(Stutzenbaker 1988), Fogarty and LaHart’s (1971) band recovery data did show a bi-model

pattern of dispersal distance, one within 14 km and one between 48 and 78 km from the release

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sites (Table 1 in Fogarty and LaHart 1971). This bi-model pattern of dispersal distance may also

explain why gene flow and inbreeding tendency reveal by FIS were both detected.

Williams et al. (2005) were not able to distinguish South Carolina mottled ducks and

mallards using five microsatellite loci. They determined that the result was due to hybridization

between mallards and mottled ducks because their unpublished data showed clear differentiation

between mallards and mottled ducks. But in this research, South Carolina mottled ducks were

not differentiated from their source populations. If South Carolina mottled ducks have widely

hybridized with mallards, differentiation between mottled ducks in South Carolina and TX-LA

should have been obvious. Therefore, this research suggests that hybridization between mottled

ducks and mallards may not be a frequent event in South Carolina. Results from Williams et al.

(2005) may be due to low numbers of microsatellite loci and sample size.

Conclusion and Management Implications

Statistical tools using allele distribution to infer long-term migration rates are limited in

their ability to provide information relevant to short-term management (Moritz 1994). In this

research, these tools have been used to reflect both short-term connectedness among mottled

duck populations since the introduction of mottled ducks to South Carolina as well as long-term

connectedness between the two subspecies of mottled ducks. Results from this research thus are

applicable to management practices and interpretation of the evolutionary history of mottled

ducks.

When all mottled duck populations are considered, genetic structure clearly separates the

two subspecies except that the northernmost population (Guana) in Florida was in the cluster of

the TX-LA subspecies. In Texas, Louisiana, and Florida south to the Orange population, genetic

structure was not clear and mottled ducks can be considered a single population in each state.

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The clear genetic structure observed along SACZ and multiple evidence have revealed gene flow

directionally from mottled ducks in GA-SC to Florida.

Bottleneck events and genetic drift were not supported by the data in the introduced

mottled duck population in the SCR, indicating that the mottled ducks in the SCR have

maintained the original genetic composition of the source populations for at least 30 years. This

result provides a safe estimate of minimal population size to establish a viable and genetically

stable population to survive 30 years. A population of smaller size may experience bottleneck

effect or genetic drift like the Rhetts population. If management practices seek to maintain a

sustainable mottled duck population without losing genetic variability in at least 30 years, a

minimum population size of 1,200 individuals would be necessary.

The two subspecies of mottled ducks are very similar genetically and the similarity should

be due to their short history of isolation. Slight but clear genetic separation of the two subspecies

indicates that they may be on the course of further differentiation. Gene flow between the two

subspecies was not found in previous research but it was detected in this research at the border of

Georgia and Florida. Management practices should seek to prevent or reduce this trend of gene

flow so A. f. fulvigula and A. f. maculosa can be maintained as distinct subspecies.

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Table 4.1. Mottled duck sample sources, seasons, and sample sizes from South Carolina,

Georgia, Louisiana, Texas, and Florida during 2001-05.

Sample code Locality Lat °N Long °W Season Sample size

SCW4 Santee Coastal Reserve, SC 33°09’ 79°17’ Winter 04 13

SCW5 Santee Coastal Reserve, SC Winter 05 12

BEW3 Bear Island WMAa, SC 32°35’ 80°28’ Winter 03 13

BEW4 Bear Island WMA, SC Winter 04 36

RHW1 Rhetts Island, GA 31°20’ 81°25’ Winter 01 7

RHW2 Rhetts Island, GA Winter 02 11

ROCR Rockefeller SWRb, LA N/A N/A Winter 04 63

ROCM Rockefeller SWR, Superior Marsh, LA 29°40’ 92°38’ Summer 05 67

ROC2 Rockefeller SWR, Unit 2, LA N/A N/A Summer 04 92

RO14 Rockefeller SWR, Unit 14, LA 29°39’ 92°35’ Summer 05 48

MILR Miller estate (private), LA 29°44’ 92°54’ Summer 05 60

SABI Sabine NWRc, LA 29°53’ 93°34’ Summer 04 16

MCFS McFaddin NWR, Star Lake, TX 29°40’ 94°10’ Summer 04 33

MCFA McFaddin NWR, TX N/A N/A Winter 04 72

ANAH Anahuac NWR, TX 29°34’ 94°31’ Summer 04 61

GUW4 Guana River WMA, FL 30°03’ 81°20’ Winter 04 38

GUW5 Guana River WMA, FL Winter 05 21

MES4 Merritt Island NWR, FL 28°38’ 80°42’ Summer 04 11

MEW4 Merritt Island NWR, FL Winter 04 8

BRS4 T. M. Goodwin WMA, Broadmoor Marsh Unit, FL 27°52’ 80°41’ Summer 04 31

BRW4 T. M. Goodwin WMA, Broadmoor Marsh Unit, FL Winter 04 21

TMW4 T. M. Goodwin WMA, T.M. Goodwin Unit, FL 27°52’ 80°41’ Winter 04 28

DUDA Duda vegetable farm, FL 26°46’ 80°40’ Summer 04 11

IMCP IMC pit mine, FL 27°45’ 81°47’ Summer 04 14

ORAN Orange Creek SGAd FL 29°27’ 82°04’ Summer 04 20

Total 807 a Wildlife management area

b State wildlife refuge

c Nation wildlife refuge

d Small-game hunting area

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Table 4.2. Sequences and motifs of the nine primer sets used for the final genotyping of mottled

ducks. All primer sets were modified from Maak et al. (2003). Other primer sets tested were five

from Fields and Scribner (1997) (Sfiµ 1, 3, 4, 5, and 7), two from Buchholz et al. (1998) (Bca 6,

11), and eight from Maak et al. (2003) (APH06, 12, 13, 16, 19, 20, 23, and 25).

Locus Motif Primer sequence (F: forward, R: reverse, 5’-3’)

APH02 (CA)3TA(CA)7 F: GGAAACAGCTATGACCAT AAC ACA CGC GCA GCA GAG R: GTTT CTT GTC GTC AGC CAG GGG TTT

APH04 (CA)14 F: GTTT GCC CCT CGG TAT TGT TTT C R: CAGTCGGGCGTCATCA GCT CTG AAG GGC ATT ATT TAG

APH05 (CA)8 F: GTTT CTT GGA CAA AAC AGG ACT T R: CAGTCGGGCGTCATC ACA GGA GAA AAC AGA GGT AA

APH08 (CA)12 F: GTTT AAA GCC CTG TGA AGC GAG CTA R: CAGTCGGGCGTCATCA TGT GTG TGC ATC TGG GTG TGT

APH15 (CA)9 F: GTT TGA ATA TGC GTG GCT GAA R: CAGTCGGGCGTCAT CAG TGA GGA ATG TGT TTG AGT T

APH17 (CA)14 F: CAGTCGGGCGTCATCA GGA CAT TTT CAA CCA TAA ACT C R: GTTT CAT CCA TGA CAG ACA GAA GA

APH18 (CA)8 F: GT TTC TGG CCT GAT AGG TAT GAG R: CAGTCGGGCGTCATCA GAA TTG GGT GGT TCA TAC TGT

APH21 (CA)8 F: GGAAACAGCTATGACCAT CTT AAA GCA AAG CGC ACG TC R: GTTT AGA TGC CCA AAG TCT GTG CT

APH24 (CA)2TA(CA)9 F: CAGTCGGGCGTCATCA TCA ACC AGT GGT CAG AGA AAA ACA G R: GTTT AGG TCA GCC CCC ATT TTA GTA CTT A

66

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Table 4.3. Descriptive statistics for each locus across 10 newly defined mottled duck populations.

Mottled duck samples were collected from 2001 thorough 2005 from Santee Coastal Reserve, SC,

Bear Island Wildlife Management Area (WMA), SC, Rhetts Island, Altamaha WMA, GA, Guana

River WMA, FL, Merritt Island National Wildlife Refuge (NWR), FL, T. M. Goodwin WMA,

FL, Duda vegetable farm, FL, IMC pit mine, FL, Orange Creek Small-game Hunting Area, FL,

Rockefeller State Wildlife Refuge, LA, Miller estate (private), LA, Sabine NWR, LA, McFaddin

NWR, TX, and Anahuac NWR, TX.

Locus Number of alleles He Ho FIS Sample size APH02 18 0.859 0.607 0.293 776 APH04 35 0.889 0.843 0.052 804 APH05 8 0.561 0.407 0.275 799 APH08 18 0.860 0.836 0.029 779 APH15 7 0.523 0.555 - 0.060 800 APH17 12 0.813 0.729 0.104 800 APH18 10 0.458 0.474 - 0.036 806 APH21 14 0.850 0.639 0.249 794 APH24 15 0.784 0.668 0.147 802 Average 15.2 0.733 0.640 0.127 795.6

He = expected heterozygosity

Ho = observed heterozygosity

FIS = inbreeding coefficient

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Table 4.4. P-values for the Hardy-Winberg Equilibrium (HWE) test for each locus and

sample. An asterisk indicates significant deviation from HWE. The sequential Bonferroni

correction was used for each locus and the initial significance level was adjusted to alpha

= 0.002 (= 0.05/25).

Sample codea State APH02 APH04 APH05 APH08 APH15 APH17 APH18 APH21 APH24

SCW4 SC 0.005 0.035 0.344 0.754 0.333 0.384 1.000 0.065 0.555

SCW5 SC <0.001* 0.654 0.203 0.998 0.139 0.018 1.000 0.325 0.431

BEW3 SC 0.016 0.424 1.000 0.414 0.244 0.384 1.000 0.039 0.077

BEW4 SC <0.001* 0.019 0.027 0.730 0.407 0.486 1.000 0.003 0.169

RHW1 GA 0.060 1.000 1.000 1.000 1.000 0.515 1.000 0.044 0.490

RHW2 GA 0.003 0.745 1.000 0.593 0.009 0.943 1.000 0.157 0.238

ROCR LA <0.001* 0.244 0.605 0.834 0.259 0.326 0.423 0.005 0.047

ROCM LA <0.001* 0.602 <0.001* 0.437 0.006 0.101 0.888 <0.001* 0.549

ROC2 LA <0.001* 0.998 0.002 0.378 0.291 0.089 0.002 <0.001* 0.027

RO14 LA <0.001* 0.799 0.212 0.118 0.056 0.772 0.382 <0.001* 0.017

MILR LA 0.024 0.540 0.073 0.811 0.084 0.269 0.505 0.140 0.015

SABI LA <0.001* 0.735 0.383 0.179 0.319 0.488 0.565 0.011 0.010

MCFS TX <0.001* 0.941 0.016 0.433 0.884 0.003 0.266 0.403 <0.001*

MCFA TX 0.090 0.306 0.039 0.470 0.075 0.057 0.602 0.057 0.001

ANAH TX <0.001* 0.852 <0.001* 0.052 0.234 0.175 0.175 <0.001* 0.001

GUW4 FL 0.070 <0.001* 0.011 0.451 0.719 <0.001* 0.198 0.421 0.811

GUW5 FL 0.862 0.308 0.123 0.747 1.000 0.003 0.902 0.123 0.059

MES4 FL 0.018 0.257 0.138 0.807 1.000 0.110 1.000 0.098 0.018

MEW4 FL 0.347 0.283 0.135 0.215 0.217 0.087 1.000 0.037 0.034

BRS4 FL 0.162 <0.001* 0.256 0.478 0.041 0.019 0.034 0.086 0.083

BRW4 FL 0.149 <0.001* 0.010 0.608 1.000 0.044 1.000 0.112 0.911

TMW4 FL 0.050 0.013 0.052 0.084 1.000 0.197 1.000 <0.001* 0.004

DUDA FL 0.220 0.003 0.882 0.263 1.000 0.800 0.307 0.028 0.715

IMCP FL 0.009 0.227 0.240 0.595 1.000 0.674 1.000 <0.001* 0.718

ORAN FL 0.717 0.175 0.014 0.133 1.000 0.830 0.169 0.869 0.866 a Refer to Table 4.1 for location, season, and size for each sample.

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Table 4.5. Ten newly defined mottled duck populations and samples combined.

Population code Samples combineda Sample size

SCR SCW4, SCW5 25

Bear BEW3, BEW4 49

Rhetts RHW1, RHW2 18

Guana GUW4, GUW5 59

Brevard MES4, MEW4, BRS4, BRW4, TMW4 99

Duda DUDA 11

IMC IMCP 14

Orange ORAN 20

LA MILR, ROCR, ROCM, RO14, ROC2, SABI 346

TX ANAH, MCFS, MCFA 166

Total 807 a Refer to Table 4.1 for location, season, and size of each sample.

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Table 4.6. Pair-wise FST (above diagonal) and p-values for G-based test (below diagonal) for the

10 newly defined populations. Significant FST values are indicated by asterisk.

SCR Bear Rhetts Guana Brevard Duda IMC Orange LA TX

SCR 0.002 0.011 0.027* 0.029* 0.034* 0.022* 0.034* <0.001 0.001

Bear 0.353 0.018* 0.031* 0.041* 0.037* 0.026* 0.049* 0.006* 0.009*

Rhetts 0.261 0.019 0.019* 0.036* 0.030* 0.033* 0.038* 0.019* 0.017*

Guana <0.001* <0.001* <0.001* 0.043* 0.030* 0.038* 0.052* 0.033* 0.032*

Brevard <0.001* <0.001* <0.001* <0.001* 0.001 0.017* 0.009 0.035* 0.036*

Duda 0.025 0.004* 0.011 <0.001* 0.565 0.005 0.014 0.036* 0.038*

IMC 0.002* <0.001* <0.001* <0.001* 0.006 0.177 0.033 0.028* 0.032*

Orange <0.001* <0.001* <0.001* <0.001* <0.001* 0.003* <0.001* 0.043* 0.043*

LA 0.032 <0.001* <0.001* <0.001* <0.001* <0.001* <0.001* <0.001* 0.002*

TX 0.039 <0.001* <0.001* <0.001* <0.001* <0.001* <0.001* <0.001* 0.001*

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Table 4.7. Genetic characteristics of microsatellite loci in ten mottled duck populations. A,

observed number of alleles, Ho, observed heterozygosity, He, expected heterozygosity, FIS,

inbreeding coefficient.

Locus Population APH02 APH04 APH05 APH08 APH15 APH17 APH18 APH21 APH24 SCR A 8 16 4 10 4 9 3 10 10 Ho 0.38 0.88 0.44 0.87 0.67 0.60 0.44 0.68 0.72 He 0.83 0.92 0.48 0.87 0.58 0.83 0.37 0.85 0.80 FIS 0.54 0.04 0.08 0.00 -0.16 0.28 -0.19 0.20 0.10 Bear A 10 15 4 13 3 9 3 12 11 Ho 0.53 0.92 0.29 0.84 0.57 0.80 0.47 0.67 0.71 He 0.87 0.88 0.37 0.83 0.48 0.83 0.48 0.86 0.81 FIS 0.39 -0.05 0.22 -0.01 -0.19 0.04 0.02 0.22 0.12 Rhetts A 9 11 4 7 3 8 4 10 9 Ho 0.47 1.00 0.65 0.94 0.28 0.89 0.50 0.59 0.89 He 0.88 0.91 0.63 0.87 0.54 0.82 0.48 0.88 0.81 FIS 0.47 -0.10 -0.03 -0.08 0.48 -0.09 -0.04 0.33 -0.10 Guana A 12 17 5 10 4 7 6 10 9 Ho 0.74 0.76 0.48 0.79 0.51 0.47 0.59 0.69 0.66 He 0.81 0.90 0.59 0.80 0.53 0.73 0.58 0.77 0.77 FIS 0.09 0.16 0.19 0.01 0.04 0.36 -0.02 0.10 0.14 Brevard A 13 22 5 12 4 8 4 9 12 Ho 0.72 0.67 0.44 0.72 0.54 0.67 0.44 0.53 0.63 He 0.83 0.90 0.63 0.78 0.50 0.77 0.38 0.80 0.75 FIS 0.13 0.26 0.30 0.08 -0.08 0.13 -0.16 0.34 0.16 Duda A 8 10 4 7 3 6 3 6 6 Ho 0.64 0.64 0.80 1.00 0.64 0.82 0.45 0.45 0.73 He 0.81 0.86 0.71 0.81 0.57 0.75 0.51 0.81 0.74 FIS 0.21 0.26 -0.13 -0.23 -0.12 -0.09 0.12 0.44 0.01 IMC A 10 10 3 7 2 5 2 4 7 Ho 0.64 0.79 0.57 0.85 0.50 0.64 0.36 0.21 0.71 He 0.87 0.88 0.67 0.87 0.49 0.75 0.39 0.72 0.80 FIS 0.26 0.10 0.15 0.02 -0.02 0.15 0.08 0.71 0.11 Orange A 9 10 4 7 2 4 3 7 4 Ho 0.75 0.70 0.50 0.60 0.50 0.80 0.40 0.75 0.60 He 0.81 0.85 0.73 0.77 0.47 0.69 0.48 0.81 0.63 FIS 0.07 0.18 0.32 0.22 -0.06 -0.16 0.17 0.07 0.05 LA A 15 25 7 16 5 10 8 14 12 Ho 0.57 0.88 0.39 0.85 0.59 0.78 0.48 0.63 0.69 He 0.85 0.87 0.51 0.86 0.50 0.82 0.46 0.85 0.79 FIS 0.33 -0.01 0.24 0.01 -0.18 0.05 -0.04 0.26 0.13 TX A 12 19 5 13 5 9 5 11 9 Ho 0.62 0.89 0.35 0.90 0.53 0.73 0.47 0.72 0.60 He 0.87 0.87 0.50 0.87 0.54 0.82 0.45 0.85 0.78 FIS 0.29 -0.02 0.30 -0.03 0.02 0.11 -0.04 0.15 0.23

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Table 4.8. Partition of the total genetic variance of mottled duck populations. Three groups are

Texas-Louisiana, Georgia-South Carolina, and Florida.

Source of variation df Sum of squares

Mean square

Variance components

Percentage of variation

Among groups 2 58.826 29.413 0.062 1.87 Within groups 1611 5261.618 3.266 3.266 98.13 Total 1613 5320.444 32.679 3.328

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Table 4.9. Results of tests of bottleneck events in mottled duck populations. The

Wilcoxon sign-rank test shows p-value for each population. The k-test shows

the number of positive k-values out of nine loci.

Population Wilcoxon sign-rank test k-test g-test Beta-value M-value

SCR 0.213 6 2.01 5.47 0.42

Rhetts 0.0

0.6

0.6

0.2

0.0

0.5

0.0

19* 5 3.36 10.13 0.41

Bear 0.248 7 1.70 4.69 0.42

Guana 33 8 1.52 5.40 0.40

Brevard 33 5 3.88 7.30 0.40

Duda 48 6 1.00 6.99 0.37

IMC 0.010* 4 3.55 8.98 0.47

Orange 05* 5 1.74 8.26 0.43

LA 90 6 2.19 6.96 0.39

TX 82 6 2.03 5.42 0.41 * significant at alpha = 0.05.

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Table 4.10. Estimated number of migrants per generation between each pair of mottled duck

populations. Above diagonal, FST-based estimates; below diagonal, private-allele method

estimates.

SCR Bear Rhetts Guana Brevard Duda IMC Orange LA TX

SCR 102.3 22.8 9.1 8.2 7.1 11.1 7.1 249.8 192.4

Bear 5.7 13.4 7.9 5.8 6.5 9.6 4.9 42.7 26.4

Rhetts 2.5 3.9 12.9 6.6 8.1 7.4 6.3 12.9 14.9

Guana 4.3 6.8 5.5 5.5 8.1 6.3 4.5 7.3 7.5

Brevard 9.2 10.4 7.3 15.9 186.3 14.4 26.6 6.8 6.7

Duda 2.5 3.6 1.6 3.8 12.8 52.9 17.5 6.7 6.3

IMC 2.1 2.5 1.4 2.0 7.4 1.0 7.3 8.8 7.5

Orange 2.0 2.5 1.4 3.2 7.7 1.5 1.0 5.6 5.6

LA 33.5 64.4 19.9 17.8 28.2 9.3 6.3 8.2 110.4

TX 12.5 15.6 5.5 8.0 13.0 4.2 2.7 3.0 247.5

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Page 88: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Figure 4.1. Locations from which samples of mottled ducks were obtained, 2001-2005, for

genetic analysis. 1: Santee Coastal Reserve; 2: Bear Island Wildlife Management Area; 3: Rhetts

Island, Altamaha WMA; 4: Guana River WMA; 5: Merritt Island National Wildlife Refuge

(NWR); 6: T. M. Goodwin WMA; 7: Duda vegetable farm; 8: IMC pit mine; 9: Orange Creek

Small-game Hunting Area; 10: Rockefeller State Wildlife Refuge; 11: Miller estate (private); 12:

Sabine NWR; 13: McFaddin NWR; 14: Anahuac NWR. The 10 newly defined populations are

SCR (1), Bear (2), Rhetts (3), Guana (4), Brevard (5 and 6, both in Brevard Co.), Duda (7), IMC

(8), Orange (9), LA (10, 11, and 12), and TX (13 and 14).

75

Page 89: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Figure 4.2. Population structure of the 10 newly defined mottled duck populations. The

structure was established using Reynold’s (1983) genetic distance and UPGMA algorithm.

Significant FST values (p<0.05) were indicated by an asterisk. P-values were from the G-based

tests. Length of branches does not reflect any relative relationship between populations.

76

Page 90: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

Figure 4.3. Population structure of the 10 newly defined mottled duck populations established

by using Reynold’s (1983) genetic distance and Neighbor-Joining algorithm.

77

Page 91: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

y = -0.6251x + 2.5232R2 = 0.1256

0

0.5

1

1.5

2

2.5

1.5 1.7 1.9 2.1 2.3 2.5 2.7 2.9

Log10(geographic distance)

Log 1

0(nu

mbe

r of m

igra

nts)

Figure 4.4. Log10(number of migrants) plotted against log10(geographic distance) for

the five mottled duck populations (SCR, Bear, Rhetts, Orange, and Guana) along

South Atlantic Coastal Zone.

78

Page 92: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

0

2

4

6

8

10

12

14

SCR Bear Rhetts Guana Brevard Duda IMC Orange LA TX

Population

Aver

age

num

ber o

f alle

les,

priv

ate

alle

les,

or a

llelic

ric

hnes

s pe

r loc

us

0.0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

Het

eroz

ygos

ity

Figure 4.5. Allelic pattern across 10 newly defined mottled duck populations in South Carolina,

Georgia, Florida, Louisiana, and Texas. Solid line: expected heterozygosity; broken line:

observed heterozygosity; open bar: average observed number of alleles per locus, black bar:

average number of private alleles per locus, slash bar: average allelic richness per locus. SCR:

Santee Coastal Reserve, SC; Bear: Bear Island Wildlife Management Area (WMA); Rhetts:

Rhetts Island, Altamaha WMA, GA; Guana: Guana River WMA, FL; Brevard: Brevard County,

FL; Duda: Duda vegetable farm, FL; IMC: IMC pit mine, FL; Orange: Orange Creek Small-

game Hunting Area, FL; LA: Louisiana, TX: Texas.

79

Page 93: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

(A)

-0.5-0.4

-0.3-0.2

-0.10.0

0.10.2

0.30.4

AIc

Male

Female

(B)

-0.6-0.5-0.4-0.3-0.2-0.10.00.10.20.30.4

AIc

AHY

HY

Figure 4.6. Average assignment index correction (AIc) for sex and age categories of mottled

ducks in Florida, Louisiana, and Texas. (A) sex-biased disperal; (B) age-biased dispersal. AHY,

after hatch year; HY, hatch year. Florida sample was all from Brevard population. Sample sizes

are shown in parentheses.

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CHAPTER 5

CONCLUSIONS

The translocation of mottled ducks from their native habitats to South Carolina has been

successful according to the definition by Griffith et al. (1989). Index of harvest per unit effort

showed an apparent increase in abundance of mottled ducks at the two Wildlife Management

Areas (Santee Coastal Reserve and Bear Island) where mottled ducks were released during 1975-

1982. The translocation is successful because not only the introduced birds established self-

sustainable populations but also the genetic variability has been maintained for 30 years. The

success provided a safe estimate of minimum population size to establish a viable and genetically

stable waterfowl population to survive 30 years. In Florida, shallow wetlands preferred by

mottled ducks have been lost due to agriculture and urban development and there is risk of

continued loss (Florida Fish and Wildlife Conservation Commission 2006a). If Florida mottled

ducks were to be maintained in fragmented or isolated habitats, 1,200 birds could serve as a

reference to estimate a reasonable population size for a particular conservation plan.

However, consequences of the introduction of mottled ducks are beyond expectations.

Two new breeding populations were established at Savannah Confined Disposal Facilities in

South Carolina and Rhetts Island in Georgia. Genetic data suggested that these two populations

were established by mottled ducks from South Carolina instead of Florida. This southward

expansion was unexpected because of mottled ducks’ non-migratory nature and fidelity to natal

areas. The expansion also caused gene flow from the subspecies Anas fulvigula maculosa in

Georgia and South Carolina to the subspecies A. f. fulvigula in Florida. This directional gene

81

Page 95: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

flow was revealed by the population structure, smaller genetic distance between Georgia and

Florida populations than that among native populations, and negative correlation between genetic

and geographic distances. Gene flow has changed the genetic composition of mottled ducks at

the Guana River Wildlife Management Area (WMA) because this population is genetically

closer to mottled ducks in Georgia and South Carolina than to those in Florida, but private alleles

of Guana population indicated that this population is a mixture of two subspecies. This

unexpected gene flow should concern biologists who have attempted to keep Florida mottled

ducks as a unique subspecies.

Habitat management could be a way to control the gene flow from mottled ducks in

Georgia to Florida. In this research, water depth was found to be the only factor that associated

with habitat use by mottled ducks at the Bear Island WMA in South Carolina. Mottled ducks

preferred water shallower than 15 cm and seldom used water deeper than 20 cm. Management

practices may deepen water level at some impoundments close to the border of Georgia and

Florida to discourage use by mottled ducks. However, this operation may also affect habitat use

by other water birds. Trapping and removing mottled ducks is another possibility to control the

population. Georgia Department of Natural Resources has successfully conducted the first

trapping and banding on mottled ducks at the Rhetts Island in summer 2006 (G. Balcom, pers.

comm.). This experience may enhance further studies on mottled ducks such as radio telemetry

to confirm their dispersal pattern, and the experience can also be used to remove a mottled duck

population in this area if the rate of southward dispersal is a concern.

The translocation of this non-migratory waterfowl species has caused unexpected

expansion and breakdown of geographic and genetic isolation between two subspecies. If the

introduced mottled ducks were from Florida, gene flow would not be a concern after these 30

82

Page 96: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

years. The introduced mottled duck population demonstrated that the consequences of a

translocation are unpredictable and may be unfavorable. Future translocation of any species

should be limited to conservation purposes only. If translocation is necessary, source

populations should be chosen from close proximity to the release sites and genetic compositions

of both source and recipient populations should be evaluated to prevent breakdown of isolation

between species or populations.

83

Page 97: A. f. fulvigula, is endemic to Florida. About 1,200 mottled

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