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04/28/22 1 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: [email protected] website: http://academics.smcvt.edu/jellis-mon aghan Jo Ellis-Monaghan

6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: [email protected]@smcvt.edu website:

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Page 1: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 1

The Increasingly Popular Potts Modelor

A Graph Theorist Does Physics (!)

e-mail: [email protected]

website: http://academics.smcvt.edu/jellis-monaghan

Jo Ellis-Monaghan

Page 2: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 2

Getting by with a little (a lot of!) help from my friends….

• Patrick Redmond (SMC 2010)

• Eva Ellis-Monaghan (Villanova 2010)

• Laura Beaudin (SMC 2006)

• Patti Bodkin (SMC 2004)

• Whitney Sherman (SMC 2004)

This work is supported by the Vermont Genetics Network through NIH Grant Number 1 P20 RR16462 from the INBRE program of the National Center for Research Resources.

• Mary Cox (UVM grad)

• Robert Schrock (SUNY Stonybrook)

• Greta Pangborn (SMC)

• Alan Sokal (NYU)

Isaac Newton Institute for Mathematical SciencesCambridge University, UK

Page 3: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 3

Applications of the Potts Model

● Liquid-gas transitions● Foam behaviors● Magnetism● Biological Membranes● Social Behavior● Separation in binary alloys● Spin glasses● Neural Networks● Flocking birds● Beating heart cells

These are all complex systems with nearest neighbor interactions.

These microscale interactions determine the macroscale behaviors of the system, in particular phase transitions.

Page 4: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 4

Ernst Ising 1900-1998

http://www.physik.tu-dresden.de/itp/members/kobe/isingconf.html

72,500 Articles on ‘Potts Model’ found by Google Scholar

Ising, E. Beitrag zur Theorie des Ferromagnetismus. Zeitschrift fr Physik 31 (1925), 253-258.

Page 5: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 5

The Ising ModelConsider a sheet of metal:

It has the property that at low temperatures it is magnetized, but as the temperature increases, the magnetism “melts away”*. We would like to model this behavior. We make some simplifying assumptions to do so.

– The individual atoms have a “spin”, i.e., they act like little bar magnets, and can either point up (a spin of +1), or down (a spin of –1).

– Neighboring atoms with the same spins have an interaction energy, which we will assume is constant.

– The atoms are arranged in a regular lattice.*Mathematicians should NOT attempt this at home…

Page 6: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 6

One possible state of the latticeA choice of ‘spin’ at each lattice point.

2q

Ising Model has a choice of two possible

spins at each point

Page 7: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 7

The Kronecker delta function and the Hamiltonian of a state

,

0 for

1 for a b

a b

a b

Kronecker delta-function is defined as:

The Hamiltonian of a system is the sum of the energies on edges with

endpoints having the same spins.

,edges

H J a b

where and are the endpoints of the edge, and is the energy of the edge.a b J

Page 8: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 8

The energy (Hamiltonian) of the state

of this system is ( )H w -10J

,( )i js s

edgesH w J

A state w with the value of δ marked on each edge.

0

10

0

000 0

00

0

1

1

1 111

0

11

1

0

0

00

0 0

0 0 0

0Endpoints have different spins, so δ is 0.

Endpoints have the same spins, so δ is 1.

Page 9: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 9

The Potts ModelNow let there be q possible states….

2q 3q 4q

Orthogonal vectors, with δ replaced by dot product

Colorings of the points with q colors

States pertinent to the application

Healthy Sick Necrotic

Page 10: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 10

More states--Same Hamiltonian The Hamiltonian still

measures the overall energy of the a state of a system.

10H J

1

1

1

1

1

1 1

1

1

1 0 0

0

0

0

0

0

0

0

0

0

00

0

The Hamiltonian of a state of a 4X4 lattice with 3 choices of spins (colors) for each element.

3

,( )i js s

edgesH w J

(note—qn possible states)

Page 11: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 11

The probability of a particular state S occurring depends on the temperature, T

(or other measure of activity level in the application)

--Boltzmann probability distribution--

Probability of a state

all states

exp( ( ))

exp( ( ))

H SP S

H

S

S

4

231 where 1.38 10 joules/Kelvin and is the temperature of the system.k T

kT

The numerator is easy. The denominator, called the Potts Model Partition Function, is the interesting (hard) piece.

Page 12: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 12

Example

all states

exp( ( ))

exp( ( ))

H SP S

H

S

S

The Potts model partition function of a square lattice with two possible spins

12exp(2 ) 2exp(4 ) 2J J

4

4H J 2H J 2H J 2H J

2H J 2H J 2H J

2H J 2H J 2H J

2H J 2H J 2H J 4H J

0H

0H

exp(4 )

12exp(2

all r

) 2exp(4 ) 2

edP

J

J J

Minimum Energy States

Page 13: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 13

Probability of a state occurring depends on the temperature

P(all red, T=0.01) = .50 or 50%

P(all red, T=2.29) = 0.19 or 19%

P(all red, T = 100, 000) = 0.0625 = 1/16

Setting J = k for convenience, so exp(4 / )

12exp(2 /all red

) 2exp(4 / ) 2

T

PT T

Page 14: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 14

Effect of Temperature• Consider two different states A and B, with H(A) < H(B). The relative

probability of the two states is:

• At high temperatures (i.e., for kT much larger than the energy difference |D|), the system becomes equally likely to be in either of the states A or B - that is, randomness and entropy "win". On the other hand, if the energy difference is much larger than kT (very likely at low temperatures), the system is far more likely to be in the lower energy state.

( ) ( )

all states all states

H A H B

H H

P A e e

P Be e

S S

S S

( )

( ), where 0.

H A D

kTH B

D

kTee

e D H A H Be

Page 15: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 15

Ising Model at different temperatures

Cold Temperature Hot Temperature

Images from http://bartok.ucsc.edu/peter/java/ising/keep/ising.htmlhttp://spot.colorado.edu/~beale/PottsModel/MDFrameApplet.html

Critical Temperature

Here H is

and energy is

i js s

# of squares

H

Page 16: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 16

Monte Carlo Simulations

?

http://www.pha.jhu.edu/~javalab/potts/potts.html

Page 17: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 17

Monte Carlo Simulations

B (old)

A (change to new)

B (stay old)

Generate a random number r between 0 and 1.

P Ar

P B

P Ar

P B

Page 18: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 18

Capture effect of temperature

High Temp Low Temp

H(B) < H(A)

B is a lower energy state than A

exp(‘-’/kT) ~1 exp(‘-’/kT) ~ 0

> r, so change states. < r, so stay in low energy state.

H(B) > H(A)

B is a higher energy state than A

exp(‘+’/kT) ~1 exp(‘+’/kT) ~1

> r, so change states. > r, so change to lower energy state.

Given r between 0 and 1, and that , with B the current state and A the one we are considering changing to, we have:

exp

P A H B H A

P B kT

Page 19: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 19

Foams “Foams are of practical

importance in applications as

diverse as brewing, lubrication,

oil recovery, and fire fighting”.

The energy function is modified by the area of a bubble.

Results: Larger bubbles flow faster.

There is a critical velocity at which the foam starts to flow uncontrollably

2

{ , }

(1 ) ( )i j n n

i j n

H J a A

9

Page 20: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 20

A personal favorite

Y. Jiang, J. Glazier, Foam Drainage: Extended Large-Q Potts Model Simulation

We study foam drainage using the large-Q Potts model... profiles of draining beer foams, whipped cream, and egg white ...

Olympic Foam:

http://mathdl.maa.org/mathDL?pa=mathNews&sa=view&newsId=392

http://www.lactamme.polytechnique.fr/Mosaic/images/ISIN.41.16.D/display.html

Page 21: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 21

Life Sciences Applications This model was developed to see if tumor growth is

influenced by the amount and location of a nutrient.

Energy function is modified by the volume of a cell and the amount of nutrients.

Results: Tumors grow exponentially in the

beginning.

The tumor migrated toward the

nutrient.

' ' ' '

2( ) ( ) 1 ( ) ( , )

ij i j ij i j Tij i j

H J V Kp i j

7

Page 22: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 22

Sociological Application

The Potts model may be used to “examine some of the individual incentives, and perceptions of difference, that can lead collectively to segregation …”.

(T. C. Schelling won the 2005 Nobel prize in economics for this work)

Variables: Preferences of individualsSize of the neighborhoodsNumber of individuals

8

Page 23: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 23

What’s a nice graph theorist doing with all this physics?

• If two vertices have different spins, they don’t interact, so there might as well not be an edge between them (so delete it).

• If two adjacent vertices have the same spin, they interact with their neighbors in exactly the same way, so they might as well be the same vertex (so contract the edge)*.

*with a weight for the interaction energy

e

Delete e

Contract eG

G-e

G/e

Page 24: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 24

Bridges and Loops

A bridge is an edge whose deletion separates the graph

A loop is an edge with both ends incident to the same vertex

bridgesNot a bridge

A loop

Page 25: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 25

Tutte Polynomial(The most famous of all graph polynomials)

; , ( ; , ) / ; ,T G x y T G e x y T G e x y

; , i jT G x y x y

Let e be an edge of G that is neither a bridge nor a loop. Then,

And if G consists of i bridges and j loops, then

Page 26: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 26

Example

3 2x x x y

= + = + + =

+ + + =

The Tutte polynomial of a cycle on 4 vertices…

13

Page 27: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 27

The q-state Potts Model Partition Function is an evaluation of the Tutte Polynomial!

If we let , and have q states, then:

( ) ( )( )

all states

exp( ( )) ; ,1V G k Gk G q v

H q v T G vv

S

S

Fortuin and Kasteleyn, 1972

1Jv e

The Potts Model Partition Function is a polynomial in q!!!

Page 28: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 28

Example

3 2x x x y

( ) ( )( )( ; , ) ; ,1V G k Gk G q vP G q v q v T G v

v

3 2

31 1 1 12 1

1 1 1

J J JJ J

J J J

e e ee e

e e e

Compute Potts model partition function from the Universality Theorem result:

12exp(2 ) 2exp(4 ) 2J J

The Tutte polynomial of a 4-cycle:

13

Let q = 2 and 1Jv e

Page 29: 6/28/20151 The Increasingly Popular Potts Model or A Graph Theorist Does Physics (!) e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website:

04/18/23 29

Thank you for attending!

• Questions?