Upload
chukwuemeka-joseph
View
220
Download
0
Embed Size (px)
Citation preview
7/31/2019 3D Computational Modeling and Simulation o
1/16
Computers in Biology and Medicine 38 (2008) 738753www.intl.elsevierhealth.com/journals/cobm
3D computational modeling and simulation ofleukocyte rolling adhesion and deformation
Vijay Pappu, Prosenjit Bagchi
Department of Mechanical and Aerospace Engineering, Rutgers University, The State University of New Jersey, 98 Brett Road, Piscataway, NJ 08854, USA
Received 2 November 2007; accepted 3 April 2008
AbstractA 3D computational fluid dynamic (CFD) model is presented to simulate transient rolling adhesion and deformation of leukocytes over a
P-selectin coated surface in shear flow. The computational model is based on immersed boundary method for cell deformation, and stochastic
Monte Carlo simulation for receptor/ligand interaction. The model is shown to predict the characteristic stop-and-go motion of rolling
leukocytes. Here we examine the effect of cell deformation, shear rate, and microvilli distribution on the rolling characteristics. Comparison
with experimental measurements is presented throughout the article. We observe that compliant cells roll more stably, and have longer pause
times due to reduced bond force and increased bond lifetime. Microvilli presentation is shown to affect rolling characteristics by altering the
step size, but not pause times. Our simulations predict a significant sideway motion of the cell arising purely due to receptor/ligand interaction,
and discrete nature of microvilli distribution. Adhesion is seen to occur via multiple tethers, each of which forms multiple selectin bonds, but
often one tether is sufficient to support rolling. The adhesion force is concentrated in only 13 tethered microvilli in the rear-most part of a
cell. We also observe that the number of selectin bonds that hold the cell effectively against hydrodynamic shear is significantly less than the
total adhesion bonds formed between a cell and the substrate. The force loading on individual microvillus and selectin bond is not continuous,
rather occurs in steps. Further, we find that the peak force on a tethered microvillus is much higher than that measured to cause tether extrusion.
2008 Elsevier Ltd. All rights reserved.
Keywords: Computational fluid dynamics; Immersed boundary method; Fluid structure interaction; Microcirculation; Leukocyte; Selectin; Receptors; Microvilli
1. Introduction
Adhesion of circulating leukocytes to vascular endothelium
is a key event in inflammatory response [1]. The process,
often called adhesion cascade, involves multiple steps that begin
with initial arrest or tethering of leukocytes to the endothelium,
followed by slow rolling of the cells. Subsequently, leukocytesfirmly adhere and spread over the endothelium, and then trans-
migrate to the sites of inflammation. Extensive studies in the
past have shown that the tethering and rolling are mediated
by three types of adhesion molecules, P-, E-, and L-selectins,
which bind to their respective ligands with high affinity [24].
P-selectin-glycoprotein-ligand-1 (PSGL-1) is a common lig-
and that is known to bind to all three selectins. Flow chamber
Corresponding author. Tel.: +1 7324453656.
E-mail address: [email protected] (P. Bagchi).
0010-4825/$- see front matter 2008 Elsevier Ltd. All rights reserved.
doi:10.1016/j.compbiomed.2008.04.002
studies have also shown tethering and rolling of leukocytes over
selectin-coated surfaces [58].
Analysis of leukocyte trajectory revealed that a rolling cell
does not flow continuously, but rather it moves in a stop-and-
go manner [4,5,9,10] due to random formation and breakage of
receptor/ligand bonds. Selectin bonds are known to have high
association and dissociation rates. A threshold shear is requiredto mediate rolling [11,12]. However, above the threshold shear,
cells roll stably with relatively less variation in rolling veloc-
ity as shear rate increases 20 folds [8,10]. Chen and Springer
[10] hypothesized an automatic braking system in which
receptor/ligand bonds increase with increasing shear to stabi-
lize rolling.
Microvilli, which are protrusions from the cell surface, also
plays a critical role in rolling [1315]. L-selectins and PSGL-1
are concentrated on the tips of microvilli. When a leukocyte
comes in proximity to the endothelium, bond formation is
http://www.intl.elsevierhealth.com/journals/cobmmailto:[email protected]:[email protected]://www.intl.elsevierhealth.com/journals/cobm7/31/2019 3D Computational Modeling and Simulation o
2/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 739
facilitated due to high accessibility of microvilli tips. Concen-
tration of L-selectins and PSGL-1 on microvilli tips also sug-
gests that selectin bonds are likely to form in clusters, rather
than distribute uniformly over the entire cell/substrate contact
zone.
While circulating leukocytes maintain a spherical shape,
rolling leukocytes are known to deform to tear-drop shapesat higher shear [8,16,17]. Firrell and Lipowsky [16] ob-
served nearly 140% increase of WBC length as the shear rate
increased from 50 to 800 s1. Cell deformability may affect
rolling in several ways [9,13,18]. Upon initial tethering, the
cell/substrate contact area becomes flat allowing formation of
newer microvilli tethers to further stabilize the rolling. Adhe-
sion via multiple microvilli would reduce the force on individ-
ual selectin bonds and prolong bond lifetime. Cell deformation
may also reduce the hydrodynamic drag, and hence the bond
force. Comparison of rolling characteristics of ligand-coated
microspheres, and fixed and normal leukocytes suggested that
normal cells roll more smoothly with longer pauses compared
to microspheres or fixed leukocytes [7,9]. The bond force was
also estimated to be significantly lower in case of an untreated
leukocyte than that on a microsphere.
Among several computational models, the adhesive dynam-
ics simulation (ADS) pioneered by Hammer and co-workers
made a significant contribution to theoretical understanding of
leukocyte rolling [1922]. In ADS, leukocytes are modeled
as rigid spheres, and the receptor/ligand interaction is sim-
ulated by stochastic Monte Carlo simulation. Recent works
by the same group have incorporated microvilli deformation
within the framework of ADS [23]. Deformation of an adher-
ent leukocyte was considered in two-dimensions by Dong and
co-investigators by modeling a leukocyte as a viscous liquiddrop surrounded by an elastic ring [8,24,25]. NDri et al. [26]
modeled leukocytes as 2D compound liquid drops to study the
effect of cell nucleus on deformation. The role of viscoelas-
ticity, and microvilli extension during leukocyte adhesion and
rolling were considered in a recent 3D model developed by
Khismatullin and Truskey [27,28]. However, the characteris-
tic stop-and-go motion of a rolling leukocyte, as observed in
vitro and in vivo, was not reported by Dong and co-workers,
NDri et al., and Khismatullin and Truskey.
Recently, Jadhav et al. [29] developed a 3D model for rolling
leukocytes by coupling cell deformation with stochastic simu-
lation of receptor/ligand interaction. Their model was able toreplicate the stop-and-go motion of leukocytes. Such com-
putational tools can be used to gain deeper insights into the
biomechanics of cell rolling and adhesion. In this article, we
present a similar 3D computational fluid dynamic (CFD) model
to simulate rolling adhesion of deformable leukocytes over a
P-selectin coated surface in a shear flow. Our computational
model is based on the immersed boundary method (IBM) for
cell deformation, and stochastic Monte Carlo simulation of
receptor/ligand interaction. Our model has been able to predict
the characteristic stop-and-go motion of rolling leukocytes.
Using the model, we address three specific questions in this
article: (i) How does deformation affect the rolling character-
istics of cells? (ii) How does distribution of microvilli affect
cell rolling? (iii) How is the adhesion force distributed in the
cellsubstrate contact zone?
2. Computational methodology
The flow configuration is described in Fig. 1. The adhesive
rolling motion of deformable leukocytes in shear flow over aP-selectin coated planar surface is considered. Shear rate is var-
ied as 100, 300 and 500 s1. The initial shape of the leuko-
cyte is spherical with diameter 8 m. Microvilli, each of length
350 nm, are distributed randomly over the cell surface. Bonds
are allowed to form in the microvilli tips. We consider two dif-
ferent microvilli distributions, Nmv =21 and 155, where Nmv is
the number of total microvilli. We consider deformation of the
cell, but not of microvilli. Further parameters of the problem
are listed in Table 1.
The computational modeling is based on the IBM [3032]
which is particularly suitable for the present study, as the leuko-
cyte is modeled as a compound liquid drop surrounded by hy-
perelastic membrane (discussed later). In IBM, a single set of
equations is used to solve the fluid motion interior and exterior
of the cell. The fluid motion is governed by the continuity and
NavierStokes equations as
u = 0, (1)
ju
jt+ u u
= p + (u + (u)T), (2)
where u is the fluid velocity, is the density, p is the pressure,
and is the viscosity. The cell surface is then recognized by a
source-like term F added to the r.h.s. of Eq. (2). For a rolling
cell in shear flow, the force on the cell surface can arise fromtwo contributions: fe the elastic force due to cell deformation,
and fa the adhesive force due to bond formation between the
cell and the substrate. The source term F is related to fe and
fa as
F(x, t ) =
jS
[fe(x, t) + fa(x
, t )](x x) dx. (3)
Here x is a point in the flow domain, x is a point on the
cell surface jS, and is the delta function which vanishes
everywhere except at the membrane. Models for computation
of fe and fa are described later.
The NavierStokes equations are discretized on a fixed
Eulerian grid, and the cellplasma interface is tracked in a
Lagrangian manner by a set of marker points distributed on the
cell surface (Fig. 1). The equations are first solved to obtain
the fluid velocity and pressure in the entire flow domain. The
velocity of the cell membrane is then obtained by interpolating
the fluid velocity as
u(x) =
S
u(x)(x x) dx, (4)
where S denotes the entire flow domain. Cells are then
advected as
dx
dt = u(x
). (5)
7/31/2019 3D Computational Modeling and Simulation o
3/16
740 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
leukocyte
Nucleus
shear flow
Eulerian grid
Y
X
X
Y
Z
cell surface
Microvillus
Selectin bondsPlate
Fig. 1. (A) Schematic of leukocyte rolling over a selectin-coated surface in a shear flow. A 2D slice is considered to show the Eulerian grid used to discretize
the flow domain. (B) Actual 3D cell showing the Lagrangian mesh on the surface. The discrete locations of microvilli are shown by . (C) Schematic of one
microvillus and selectin bonds.
Table 1
Parameter values used in simulations
Parameter Value Source
Shear rate 100, 300, 500 s1
Leukocyte diameter 8m
Membrane stiffness (Eh) 2.6, 0.9, 0.3 dyn/cm [29]
Microvillus length 0.35m [14,43]
Number of microvillus (Nmv) 21, 155 [14]
Number of ligands 50/microvilli [29]
Receptor site density 144/m2 [6]
Selectin bond length (l0) 0.1m [48]
Spring constant (kb) 1 pN/nm [48]
Transition spring constant (kts) 0.99 pN/nm [6]
Unstressed forward rate (k0f ) 3.30 s1 [49]
Unstressed reverse rate (k0r ) 3.7 s1 [6]
Distribution of the forces from cell surface to the surround-
ing fluid grid (Eq. (3)), and interpolation of the fluid veloc-
ity onto the cell surface (Eq. (4)) involve a 3D delta function
which is constructed by multiplying three 1D delta functions as
(x x) = (x x)(y y)(z z). For numerical imple-
mentation, a discretized representation of the -function is used
as [31]
D(x x) =1
643
3i=1
1 + cos
2(xi x
i )
for |xi x
i |2, i = 1, 2, 3,
D(x x) = 0 otherwise, (6)
where is the Eulerian grid size. The above representation
approaches the analytical delta function as approaches zero.
The discrete delta function is so constructed that the distribu-
tion of the surface forces, or the interpolation for the surfacevelocity, is performed over a sphere of diameter equal to four
Eulerian grid points surrounding each Lagrangian node. In dis-
crete form, the integrals in Eqs. (3) and (4) are written as
F(xj) = i D(xj xi )f(x
i ), (7)
u(xi ) = jD(xj xi )u(xj), (8)
where i and j represent the Lagrangian and Eulerian grid points,
respectively.
We model leukocytes as compound liquid drops surrounded
by thin hyperelastic membranes. The membrane is assumed to
follow the neo-Hookean law. The strain energy function for themembrane is then given by
W =Eh
6(21 +
22 +
21
22 3), (9)
where E is the modulus of elasticity, h is the membrane thick-
ness, and 1 and 2 are the principal stretch ratios. Note that
the neo-Hookean model does not strictly represent a leukocyte
membrane. Models which closely resemble large deformation
of leukocytes during micropipette aspiration exist in the litera-
ture [33,34], and can be implemented in IBM. We choose the
neo-Hookean model as it is easy to implement, yet can predict
cell deformation under rolling conditions [29]. Three values of
7/31/2019 3D Computational Modeling and Simulation o
4/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 741
Eh, 0.3, 0.9, and 2.6 dyn/cm, are considered in the simulations
following Jadhav et al. [29].
The cell surface is discretized using triangular elements
(Fig. 1). We use a finite element model to compute the elastic
force generated on the cell surface due to deformation [35].
In this model, the elastic force fe is obtained at three nodes of
each element by differentiating the strain energy function Wwith respect to the nodal displacement v as
fe =jW
j1
j1
jv+
jW
j2
j2
jv. (10)
The main idea is that a general 3D deformation of the membrane
can be reduced to a 2D problem by assuming that individual
triangular element on the membrane remains flat even after
deformation, and that the membrane force remains invariant
under a rigid body rotation. This assumption still allows large
deformation of a leukocyte in the model. The resultant force feat a membrane node is the vector sum of the forces exerted by
all elements surrounding that node.Formation of receptor/ligand bonds between a leukocyte and
the substrate is simulated using stochastic Monte Carlo method
[19,29]. Bonds are assumed to behave as stretched springs under
force loading following a Hookean model [36]. The probability
of formation of a new bond, and that of breakage of an existing
bond, in a time interval t, are given by
Pf = 1 exp(kft ) (11)
and
Pr = 1 exp(krt ), (12)
respectively, where kf and kr are the forward and reverse reac-tion rates which are computed as
kf = k0f exp
kts(l l0)2
2KBT
(13)
and
kr = k0r exp
(kb kts)(l l0)
2
2KBT
, (14)
where k0f and k0r are the unstressed reaction rates, kb is the
spring constant, kts is the transition state spring constant, l and
l0 are the stretched and unstretched lengths of a bond, KB isthe Boltzmann constant, and T is the absolute temperature.
Values of the parameters are given in Table 1. At a given time
instance, two random numbers N1 and N2, between 0 and 1,
are generated. A new bond is allowed to form if Pf > N1, and
an existing bond is allowed to break if Pr > N2 [19,29]. Force
in each bond fb is then obtained as
fb = kb(l l0). (15)
The adhesion force fa is the vector sum of the forces arising
from all bonds formed in a microvillus tip.
The NavierStokes equations are discretized spatially using
a second-order finite difference scheme, and temporally using
a two-step time-split scheme. In this method the momentum
equation is split into an advectiondiffusion equation and a
Poisson equation for the pressure. The body-force term is re-
tained in the advectiondiffusion equation. The nonlinear terms
are treated explicitly using a second-order AdamsBashforth
scheme, and the viscous terms are treated semi-implicitly us-
ing the second-order CrankNicholson scheme. The resultinglinear equations are inverted using an ADI (alternating direc-
tion implicit) scheme to yield a predicted velocity field. The
Poisson equation is then solved to obtain pressure at the next
time level. Using the new pressure, the velocity field is cor-
rected so that it satisfies the divergence-free condition. The cell
surface is also advected using a second-order AdamsBashforth
scheme. Details of the time-step scheme are given in Bagchi
and Balachandar [37]. Computational domain is a rectangular
box with the longest axis aligned parallel to the flow direction
(X). The domain is assumed periodic in the X and Z directions.
Typical Eulerian resolution used in the flow solver is 320 points
in X, and 120 points each in the Y and Z directions. Typical
Lagrangian mesh used to discretize the cell surface consists of
1280 triangular elements.
3. Validation of numerical method
We first validate our IBM code against published results on
cell deformation. For this purpose, we consider deformation
of a spherical capsule as a model cell placed in a linear shear
flow as shown in Fig. 2. A capsule is a liquid drop surrounded
by an elastic membrane. In a shear flow a capsule deforms into
an ellipsoidal shape. The deformation can be expressed using a
dimensionless parameter D =(LB)/(L +B), where L and B
are the major and minor axis of the ellipsoid in the plane of theshear (Fig. 2A). Time-history of D for various dimensionless
shear rate is shown in Fig. 2B and compared with that obtained
by boundary integral simulation by Ramanujan and Pozrikidis
[38]. Excellent agreement between the two simulations is
observed.
Sensitivity of our results to the Eulerian and Lagrangian res-
olutions is shown in Fig. 2C (and, in inset 2D) by considering
three test simulations at different resolutions: (i) 803 Eulerian
grids and 1280 Lagrangian elements, (ii) 1203 Eulerian grids
and 1280 Lagrangian elements, and (iii) 1203 Eulerian grids
and 5120 Lagrangian elements. No significant difference is
observed between the three test cases.We also keep track of the cell volume during the simulations.
The change in the cell volume is less than 0.1% from its
initial volume. The projection method used here for flow solver
satisfies the mass (or, volume) conservation up to 1014 at
every grid point in the computational domain.
4. Results
Snapshots of a rolling leukocyte obtained from a simulation
at 500 s1 and Eh = 2.6dyn/cm are presented in Fig. 3. Shown
here is a sequence of initial tethering, cell deformation, and
tether breakage. In Fig. 3A, initial bonds are just formed on
microvillus 1. The cell shape is nearly spherical at this time.
7/31/2019 3D Computational Modeling and Simulation o
5/16
742 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
B
L
Undeformed Capsule
Deformed Capsule
00 2 4 6 8
0.2
0.4
0.6
0.8
0.2
0.025
0.05
0.1
0 2 4 6 80
0.1
0.2
0.3
0.4
0.5
3.5 4 4.5
0.38
0.39
0.4
Fig. 2. Validation of IBM code. (A) Schematic of a spherical capsule deforming in shear flow. (B) Deformation index D versus time. : present results;
Ramanujan and Pozrikidis [38]. Results are shown for various values of dimensionless parameter a/2Eh where a is cell diameter and is shear rate.
(C) Grid resolution test. , 803 Eulerian points and 1280 Lagrangian elements; 1203 Eulerian points and 1280 Lagrangian elements;
1203 Eulerian points and 5120 Lagrangian elements. (D) Inset showing the closeup.
Upon initial tethering, the cell rotates clockwise due to the fluid
torque (Fig. 3B). The rolling motion temporarily stops, and
the cell deforms to make a flat contact area with the substrate
(Fig. 3C). As a result, more microvilli become available for
bond formation, such as microvillus 2 in Fig. 3C. Sub-
sequently, microvillus 1 breaks, cell rolling commences
(Fig. 3D), and the contact area decreases. The cell is eventually
tethered via microvillus 2 (Fig. 3E). The contact area in-
creases again, and microvilli 3 and 4 also become available
for bond formation. Fig. 3F shows the breakage of microvillus
2 followed by cell rolling. In Fig. 3G, the cell is shown to
tether again by microvillus 4.
The rolling sequence of a more compliant cell (Eh =
0.3dyn/cm) is presented in Fig. 4. Fig. 4A shows the initial
arrest of the cell by tethering of microvillus 1, followed by
deformation of the cell into a tear-drop shape in Figs. 4BC.
The contact area increases significantly, and four microvilli
become available for bond formation. However, the cell is
anchored only by microvillus 1 located in the sharp corner
formed at the trailing edge. In Fig. 4D, microvillus 1 breaks,
and the rear end of the cell retracts. Figs. 4E and F show
formation of a new tether via microvillus 2, followed by cell
spreading.
Figs.3 and 4 show that during rolling adhesion, the cell shape
deviates significantly from its spherical shape. Average contact
area is shown in Fig. 5A. It increases with increasing shear
rate and decreasing membrane stiffness. The present results
show excellent agreement with the in vivo measurements by
Firrell and Lipowsky [16]. We also compute a dimensionless
parameter called deformation index, L/H, where L is the end-
to-end length along the flow direction, and H is the height of the
cell (Fig. 5B). The ratio increases with increasing shear rate and
decreasing membrane stiffness. The qualitative trend and the
range of values are in agreement with the in vivo measurements
of Damiano et al. [17] and Firrell and Lipowsky [16] (shown in
Fig. 5B), and 3D computational modeling of Jadhav et al. [29].
Next we consider the trajectory of a rolling leukocyte.
Fig. 6 shows the axial (x) displacement of the cell w.r.t. time.
Cell motion is characterized by a series of steps during which
the cell rolls, and pauses during which the cell is adherent. Our
results show the role of shear-rate and membrane stiffness in
modulating the steps and pauses. Effect of varying shear rate at
a constant Eh = 0.3dyn/cm is illustrated by plots AC which
show shorter pause times and more frequent steps with increas-
ing shear. Effect of varying membrane stiffness at a constant
shear is illustrated by plots CE, which show decreasing step
sizes and longer pause times with decreasing stiffness. The
instantaneous rolling velocity corresponding to the trajectories
is also shown in the same figure (right panel). The stochastic
nature of the cell motion is evident here by fluctuations in cell
7/31/2019 3D Computational Modeling and Simulation o
6/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 743
1
A
1
B
X
Y
Z
YX
Z
1
2
C
2 D
2
3
4E
4F
4 G
Fig. 3. Sequence of a rolling leukocyte at 500 s1 shear rate, Eh = 2.6dyn/cm, and Nmv = 21. The shear flow and the cell movement are from left to right.
The left panel shows sideview, and the right panel shows bottomview. Lagrangian mesh on the cell surface is also shown. In the bottomview, microvilli
forming bonds are marked by numbers 1, 2 etc.
velocity. The fluctuations increase with increasing shear rate
and membrane stiffness implying that a leukocyte rolls less
stably at higher shear rate and membrane stiffness.
The average pause time of a rolling leukocyte obtained from
our simulations is shown in Fig. 7A. The average pause time
varies between 0.04 and 0.6 s. It strongly depends on shear
rate, and decreases with increasing shear rate. The pause time
depends strongly on membrane compliance at low shear rate,
but weakly at higher shear rate. It increases with increasing
membrane compliance. In Fig. 7A, we compare our computed
pause times with the experimental data of Smith et al. [6],
and find reasonable agreement. Our simulations also predict
that the average pause time does not depend on the microvilli
distribution given by Nmv (not shown).
The average step size of a rolling leukocyte obtained from
our simulations is shown in Fig. 7B. The step size strongly
7/31/2019 3D Computational Modeling and Simulation o
7/16
744 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
1
X
Y
Z
1
1
2
3
4 C
1
2
B
XY
Z
1
2
A
1
2
3
4D
2
3
4E
2
3
4F
Fig. 4. Same as in Fig. 3 except Eh = 0.3dyn/cm.
depends on Nmv. For Nmv = 155, the average step size is in the
range 0.2.0.6m, and it does not strongly depend on shear rate
and membrane stiffness. For Nmv = 21, the step size increases
significantly due to more sparse distribution of microvilli. The
step size also decreases with decreasing membrane stiffness
and increasing shear rate. For Nmv = 21, the step size depends
strongly on the membrane stiffness at low shear, but weakly on
shear rate at low stiffness.
7/31/2019 3D Computational Modeling and Simulation o
8/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 745
shear rate (1/s)
100 200 300 400 50010
20
30
40
contactaream
2
shear rate (1/s)
deformationindex(L/H)
100 200 300 400 5001
1.2
1.4
1.6
1.8
2
Firrell &Lipowsky
Fig. 5. Average contact area (A) and deformation index (B). Dash lines are best fit curve obtained by Firrell and Lipowsky [16] based on in vivo measurements;
solid lines are present results. Eh = 2.6dyn/cm, Eh = 0.9dyn/cm, Eh = 0.3dyn/cm.
Average rolling velocity is shown in Fig. 8. It increases with
increasing shear rate, increasing membrane stiffness, and de-
creasing Nmv. At Nmv = 21, the average rolling velocity ranges
from about 4 to 112 m/s, whereas at Nmv = 155, it ranges
from 3 to 11 m/s. At higher Nmv, and lower shear, the rolling
velocity does not change significantly with varying membrane
stiffness; but it depends strongly on membrane stiffness at lower
Nmv and higher shear. In the figure, we compare our results
with three experimental measurements, Kim and Sarelius [4],
Yago et al. [9], and Ramachandran et al. [39], which show rea-
sonable agreement. Our results at Nmv = 21 are in agreement
also with in vivo data (30.
50m/s) of Firrell and Lipowsky[16].
As a quantification of the stochastic nature of cell rolling,
we compute RMS (root-mean-square) of instantaneous rolling
velocity in Fig. 10A. The RMS of the axial velocity shows
a strong dependence on shear rate, membrane stiffness, and
microvillus distribution. The RMS increases with increasing
shear rate, and membrane stiffness. On the contrary, it decreases
with increasing number of microvilli. At Nmv = 155, the RMS
does not change appreciably w.r.t. shear rate and membrane
stiffness, though it shows an increasing trend w.r.t. these pa-
rameters. At Nmv = 21, several-folds increase in the RMS is
observed at higher membrane stiffness, and higher shear rate.
Hence, the cell rolls more stably with the denser population of
microvilli, and at lower shear rate and membrane stiffness.
Interestingly, our simulations predict that during the rolling
motion, a leukocyte can undergo a significant sideway move-
ment. Fig. 9 shows the instantaneous lateral velocity of the cell
for a representative case. The lateral velocity, similar to the
axial velocity, also shows fluctuations which increase with in-
creasing shear rate and membrane stiffness. The RMS of the
lateral velocity fluctuations is shown in Fig. 10B for Nmv = 21
which shows similar trend as that of the axial velocity RMS.
The lateral velocity RMS increases with increasing shear rate,
and membrane stiffness, and decreasing number of microvillus.
For Nmv = 21, the RMS of the lateral velocity is comparable
to, though lower than, that of the axial velocity. At higher
Nmv = 155, the RMS of the lateral velocity is found to be sig-
nificantly low (not shown).
Total adhesion force between the cell and the substrate is
shown in Fig. 11A as a function of shear rate, membrane stiff-
ness, and microvilli distribution. The adhesive force obtained
in our simulations ranges from about 100 to 750 pN for shear
rates 100.500s1. In comparison, the adhesive force estimated
by House and Lipowsky [40], based on in vivo measurements,
ranges from 110 to 7610 pN for shear rates 200.2500 s1. The
adhesive force increases with increasing membrane stiffness,
partly due to increased hydrodynamic drag on less compliantcells. The adhesive force also increases with increasing shear
rate and increasing microvilli population.
It is also of interest to examine how the adhesive force is dis-
tributed within the cell-surface contact area. This is shown in
Fig. 11B for a representative case at 500 s1, Eh = 0.3dyn/cm,
and Nmv = 155. In our simulations, bonds are assumed to form
at the microvilli tips only. Hence the distribution of the adhe-
sive force is not continuous, rather discrete. In Fig. 11B, we
show the 3D distribution of the microvilli over the cell surface
in the contact area. Together Figs. 11B and d show how the
adhesive force is distributed among all 20 microvilli that are
present in the contact area. Nearly 90% of the total adhesion
force is concentrated in three microvilli (marked by arrows in
Fig. 11D) which form tethers in the rear end of the cell. The
force on each of these tethered microvilli ranges from 200 to
400 pN, while that on each of the remaining 17 microvilli is in
the range 020 pN. The maximum force on a tethered microvil-
lus is shown in Fig. 11C as a function of shear rate, membrane
stiffness, and microvilli distribution. This force is obtained
before a tether breaks away from the substrate. It ranges from
about 80 to 420 pN.
The average number of microvilli that form tethers, and the
total number of microvilli available within the contact area are
shown in Fig. 12. For Nmv = 155, the number of microvilli
within the contact area increases with increasing shear rate
7/31/2019 3D Computational Modeling and Simulation o
9/16
746 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
Time (s)
Displacement(micron)
1 2 3
10
15
20
25
C
B
A
Time (s)
Displacement(micr
on)
0.1 0.2 0.3 0.4 0.5
20
30
40
50
60
E
D
C
Velocity(micron/
s)
0 0.5 1 1.5 2 2.5
0
100
200
0 0.5 1 1.5 2 2.5
0
200
400
600
800
0 0.2 0.4 0.6
0
200
400
600
800
0 0.2 0.4 0.6
0
200
400
600
800
Time (s)
0 0.2 0.4 0.6
0
500
1000
Fig. 6. Axial displacement (left figures) and axial velocity (right figures) of a rolling leukocyte. A, B, and C show the effect of shear rate which varies as
100, 300, and 500 s1, respectively, at a constant Eh = 0.3dyn/cm. C, D, and E show the effect of membrane stiffness which varies as Eh = 0.3, 0.9, and
2.6dyn/cm, respectively, at a constant shear rate of 500s1.
and membrane compliance due to increased deformation of the
cell. For the most compliant cell considered here at 500 s1
shear rate, nearly 35 microvilli are available in the contact area.
However, only five of them form tethers. The number of teth-
ers increases slightly with increasing shear rate and membrane
compliance. For Nmv = 21, the average number of tethers is
even lower, and in the range of 12.
We next examine the average number of selectin bonds
formed between a cell and the substrate in Fig. 13. Note that we
assume 50 PSGL-1 ligands on each microvillus tip (Table 1).
In contrast, we observe that only about half of them, at most,
forms bonds. The force on these bonds ranges from 0 to
100 pN (discussed later). However, even less than half of these
bonds carry a force > 10 pN. Thus we consider a bond to be
7/31/2019 3D Computational Modeling and Simulation o
10/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 747
shear rate (1/s)
pausetim
e(s)
0 100 200 300 400 500
0
0.2
0.4
0.6
0.8
Smith et al
shear rate (1/s)
stepsize(m
icron)
100 200 300 400 5000
1
2
3
4
5
Fig. 7. (A) Average pause time, and (B) step distance as functions of shear rate, microvilli distribution, and membrane stiffness. Eh = 2.6, Eh = 0.9, and
Eh = 0.3dyn/cm. Solid lines represent Nmv = 21 and dash line Nmv = 155. represent in vitro data of Smith et al. [6]. Pause time does not depend on
Nmv, hence only data for Nmv = 155 are shown.
X
X** *
shear rate (1/s)
100 200 300 400 500 6000
5
10
15
shear rate (1/s)
a
veragevelocity(micron/s)
100 200 300 400 5000
20
40
60
80
100
120
Kim &Sarelius
Fig. 8. Average rolling velocity for (A) Nmv = 21 and (B) Nmv = 155. Present results: Eh = 0.3, Eh = 0.9, Eh = 2.6dyn/cm. Experimental
results: - - - - Kim and Sarelius [4], Yago et al. [9], X Ramachandran et al. [39].
stretched when the force on it is > 5 pN. The average number
of total bonds ranges from 200 to 500, and agrees well with
that estimated by Jadhav et al. [29]. Remarkably, however, the
number of stretched bonds lies in the range 2080.Next we examine the history of the force on individual
microvilli. A representative case at 500 s1, Eh = 0.3dyn/cm,
and Nmv =21 is considered in Fig. 14A. The microvilli are iden-
tified by numbers 1, 2 etc. The location of these microvilli
on the cell surface was shown earlier in Fig. 4. Strikingly,
our simulations show that the force on a microvillus devel-
ops in steps. As an illustration, consider microvillus 4 which
comes in contact with the substrate and forms adhesion bonds
at around t= 0.03 s. However, the bonds on microvillus 4 are
not stretched until t= 0.13 s as the cell is tethered by microvilli
2 and 3. Hence the force acting on microvillus 4 remains
less than 10 pN. At t = 0.13 s, microvillus 2 breaks. As the
cell begins to roll, bonds in microvilli 3 and 4 are stretched,
and the forces on them sharply increase. Subsequently, the cell
is tethered by microvillus 3, and the force on it increases to
about 350 pN. The force on microvillus 4 also increases to
80 pN due to bond stretching. At aroundt =
0.175 s, microvil-lus 3 breaks. The cell rolls again, and the bonds in microvillus
4 are stretched further, and the force jumps to 280 pN.
We next examine the force history in individual
P-selectin/PSGL-1 bonds in Fig. 14B. Formation and breakage
of individual bonds occur throughout the lifetime of a tether.
When one bond breaks, forces on the remaining bonds in the
cluster increase in a step-like manner. It also implies that mul-
tiple bond breakage, rather than a single event, is necessary
for a microvillus tether to break. We also note that for a few
bonds, the peak force on individual bond is as high as 50 pN,
while for others the force remains below 10 pN. It again sug-
gests that, though multiple bonds are present, not all of them
are effective in tethering the cell.
7/31/2019 3D Computational Modeling and Simulation o
11/16
748 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
The average bond rupture force, and the bond lifetime are
shown in Figs. 15A and B. The rupture force varies in the
range of 2080 pN, and it increases with increasing shear
rate and membrane stiffness. The bond lifetime, which corre-
lates well with the cell pause times shown earlier, decreases
with increasing shear and membrane stiffness. Dependence
of bond lifetime on membrane stiffness is stronger at lowshear.
5. Discussion
3D computational modeling and simulation are presented
to study adhesive rolling of deformable leukocytes in a shear
flow. We study the effect of cell deformation, shear rate, and
microvilli distribution on the rolling characteristics. The simu-
lations show the transient deformation of a tethered leukocyte
in to a tear-drop shape as observed in previous experiments
(Fig. 4). Computed cell deformation agrees well with earlier in
vivo and in vitro measurements (Fig. 5). The average rolling ve-
locity increases with increasing shear and membrane stiffness,
and also agrees well with previous experimental measurements
(Fig. 8).
The sequence of cell shape presented in Figs. 3 and 4 sug-
gested that the cellsubstrate contact area of a rolling leukocyte
varies with timeit increases when the cell is adherent, and
Time (s)
0.1 0.2 0.3 0.4 0.5
-200
0
200
400
E
Fig. 9. Sideway velocity (m/s) of a rolling leukocyte. The case shown is
the same as in Fig. 6E.
shear rate (1/s)
RMSvelocity(micron
/s)
100 200 300 400 5000
50
100
150
200
250
shear rate (1/s)
100 200 300 400 5000
50
100
150
200
250
Fig. 10. RMS velocity fluctuation of (A) axial and (B) sideway motion. Nmv = 21 and - - - - - Nmv = 155. Eh = 0.3, Eh = 0.9, and Eh = 2.6dyn/cm.
For (B) Nmv = 155 does not give any significant sideway motion, and hence data not shown.
decreases when the cell is rolling, in agreement with in vitro
observation of Dong et al. [8]. Previous in vivo and in vitro
studies suggested that rolling leukocytes become flattened
against the substrate upon initial tethering. Our results in Figs. 3
and 4 suggest that upon initial tethering, the cell rotates about
the tether followed by flattening of the cell surface which
occurs very rapidly, and often within a fraction of a second.One distinct characteristics of leukocyte rolling observed in
vivo and in vitro is that the cells do not roll continually, but
rather in a stop-and-go manner. Previous computational models
that considered deformation of adherent leukocytes did not re-
port such intermittent motion [2428]. The stop-and-go motion
is due to formation and breaking of receptor/ligand bonds, and
can only be predicted by stochastic simulation. Coupling cell
deformation with stochastic bond kinetics is relatively new in
the context of modeling of leukocyte rolling. Our IBM simula-
tion has been able to predict the stop-and-go motion of a leuko-
cyte. Our simulations predict that the fluctuations in rolling ve-
locity are reduced, and hence the rolling motion stabilizes, with
increasing cell deformability, in agreement with earlier exper-
imental observations [7,9].
Our simulations predicted that a leukocyte can undergo a
significant sideway motion during rolling. The sideway motion
is purely due to the stochastic nature of bond formation, and
discrete nature of microvilli presentation. A microvillus can
form an initial tether that may be oriented at a non-parallel angle
with the shear flow, causing the cell to move sideway once an
earlier tether breaks. However, once the cell is tethered by the
new microvillus, it quickly orients itself parallel to the flow.
Not only the stochastic formation and breakage of selectin
bonds, also the presentation of the microvilli affects the fluc-
tuating motion of a leukocyte. By considering two differentmicrovilli distributions, we show that the average rolling veloc-
ity and fluctuations are higher for the sparse distribution. The
higher rolling velocity is caused by increasing step size which
seems to correlate with the inter-microvilli distance. Presence
of microvilli in our model allows formation of discrete bond
clusters rather than uniform distribution of bonds over the
7/31/2019 3D Computational Modeling and Simulation o
12/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 749
shear rate (1/s)
force(pN)
100 200 300 400 5000
200
400
600
800
shear rate (1/s)
force(pN)
100 200 300 400 5000
100
200
300
400
500
Flow
Y X
Fig. 11. (A) Average total adhesion force, (B) distribution of adhesion force among all bound microvilli in the cell/substrate contact area, (C) average peakforce on individual tethered microvilli, and (D) distribution of bound microvilli over the cell surface. The arrows indicate three microvilli forming tethers.
Nmv = 21 and - - - - - Nmv = 155. Eh = 2.6 and Eh = 0.3dyn/cm.
entire cell/substrate contact zone. In vivo measurement by
Zhao et al. [42] obtained step size 2 m, while in vitro mea-
surements by Alon et al. [46] for L-selectin mediated rolling
estimated 3.4m. These data, together with our prediction
of 0.5.4m step size for P-selectin mediated rolling sug-
gested that the step-distance is independent of the nature of
receptorligand complex, and is dependent on the microvilli
distribution. The pause time between successive rolling steps
is observed to depend not only on shear rate, but also on cell
deformability. On the contrary, it did not depend on microvilli
distribution.
We found that leukocyte adhesion is via multiple tethers,
varying from 2 to 5 in numbers. These numbers are, however,
significantly less than the number of microvilli, often up to 35,
which are available within the cell/substrate contact area, and
are observed to form bonds. Increasing the shear rate by a factor
of five only doubled the number of tethered microvilli from an
average value of 2.5 to 5. Though multiple tethers are observed
in most of our simulations, we also observe that a single tether
is often sufficient to support rolling. We examined how the
adhesion force is distributed among all microvilli that are bound
to the substrate. Though nearly all microvilli in the contact
area contain bonds, significant adhesive force is concentrated
in 13 tethered microvilli located in the rear-most part of the
cell.
The peak force on a tethered microvillus predicted by
our simulations is significantly above the force required for
tether extrusion (61 pN) measured by Shao et al. [43]. Our
results, therefore, predict that the microvilli in the rear end
of the cell would develop tether extrusion, while those in the
remaining part of the contact area would at most undergo
elastic tension. Although we have not considered deformation
of a microvillus in our model, such a consideration would
reduce the tether force [23,43,44]. In that case, tether ex-
trusion may occur only at higher shear rate and membrane
stiffness.
We observe that multiple, rather than single, selectin bonds
form per microvillus. When a tether microvillus breaks and
pulls from the substrate, several bonds, varying from 9 to 14,
break simultaneously. We also observe that during a pause in the
rolling motion, individual bonds within the tethered microvillus
can break. But breakage of individual bond does not lead to the
7/31/2019 3D Computational Modeling and Simulation o
13/16
750 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
shear rate (1/s)
100
300
500
0
10
20
30
40
shear rate (1/s)10
0300
500
0
10
20
30
40
shear rate (1/s)
100
300
500
0
10
20
30
40
shear rate (1/s)
100
300
500
0
10
20
30
40155 microvilli
Eh=0.3 dyn/cm
155 microvilli
Eh=2.6 dyn/cm
21 microvilli
Eh=2.6 dyn/cm
21 microvilli
Eh=0.3 dyn/cm
Fig. 12. Average number of total bound microvilli (open bars) and tethered microvilli (solid bars) as functions of shear rate, cell compliance, and microvilli
distribution.
breakage of the tether, as other bonds quickly stretch to share
the load. Simultaneous breakage of multiple bonds can only
cause a tether to retract.
The facts that multiple bonds form per microvillus, and
the pause time of rolling motion was found to depend on cell
compliance, are noteworthy in the context of experimental es-
timation of bond dissociation rates. Bond dissociation rates are
often measured based on the pause times obtained from leuko-
cyte rolling in flow chamber. However, cell deformation cannot
be easily controlled in such experiments. Assuming single bond
dissociation, the Bell model [45] is fit to the measurements to
obtain the bond dissociation rate. Direct measurements using
atomic force microscopy or laser trap yielded different values
than that obtained from flow chamber experiments [3,11,47].
Our results suggest that two possible reasons for discrepancy
are cell deformation and formation of multiple bonds per
tether.
Our simulations predicted the average number of total
bonds in the range 100500, and it increases with increas-
ing shear rate and membrane compliance due to increased
cell-surface contact area resulting in more bound microvilli.
However, we observe that only a few bonds residing in the
tethered microvilli are significantly stretched. The average
number of stretched bonds is in the range of 2080 which
increases with increasing shear rate, due to increasing num-
ber of tethers, but does not depend on membrane compliance
due to the fact that the number of tethers did not increase ap-
preciably with increasing cell deformability. Per microvillus,
only 914 bonds are predicted to be significantly stretched,
which agrees well with the measurements of Chen and
Springer [10].
The maximum and average rupture force of a P-selectin/
PSGL-1 bond was estimated to be 100 and 60 pN, respectively,
which is in the same range as measured recently by Marshal
et al. [48] using atomic force microscopy. It is also in the
same range as that obtained by Schmidtke and Diamond ([41],
86172 pN at 100250 1/s). We observe that bond force in-
creases with increasing shear and membrane stiffness. Depen-
dence of bond force on cell deformability is also in agreement
with previous in vitro studies using untreated neutrophil, and
ligand-coated microbeads [7]. The bond force was measured to
be 500 pN for microbeads and 124 pN for neutrophil at a shear
7/31/2019 3D Computational Modeling and Simulation o
14/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 751
shear rate (1/s)
Bonds
100 200 300 400 5000
100
200
300
400
500
Fig. 13. Average total bonds (solid lines) and stretched bonds (dash lines).
Eh = 2.6 and Eh = 0.3dyn/cm.
Time (s)
force
(pN)
0.05 0.1 0.15 0.2 0.250
100
200
300
400
500
1
2
3
3
5
4
Time (s)
force
(pN)
0.7 0.8 0.9 1 1.1 1.2 1.3 1.40
10
2030
40
50
60
70
Fig. 14. (A) Force history of a few microvilli and (B) force history of a few bonds within a particular microvillus. In (A), microvilli are indicated by number
1, 2, etc. which are same as shown earlier in Fig. 4. In (B) arrows indicate step increase in bond force in response to breaking of another bond.
shear rate (1/s)
Bondpeakforce(pN)
100 200 300 400 5000
20
40
60
80
100
shear rate (1/s)
Bondlifetime(s)
100 200 400300 500
0
0.2
0.4
0.6
0.8
1
Fig. 15. (A) Peak bond force and (B) bond life time. Eh = 2.6 and Eh = 0.3dyn/cm.
rate 100 s1 (see also Smith et al. [6]). Significantly reduced
bond force for neutrophil compared to that for microspheres
was attributed to microvilli elongation. In contrast, microvilli
extension was not considered in our model. Our result, there-
fore, suggests that cell deformation helps reducing the bond
force and prolong bond lifetime. Hydrodynamic shear and cell
deformation have competing effects on bond dissociation. Forceon individual bond increases, and hence bond lifetime de-
creases, with increasing shear. Despite rapid bond dissociation
at high shear, leukocyte rolling is stabilized by cell deformation
via two pathways. First, increased cell/substrate contact area
causes more microvilli to be accessible for bond formation. In-
creased number of tethers with increasing shear alleviates the
force on individual bond. The second mechanism is the reduc-
tion of the hydrodynamic drag on a deformed cell which also
reduces bond force and hence the dissociation rate.
In conclusion, we presented a 3D model to simulate a rolling
leukocyte in shear flow. Our model predicted the stop-and-go
motion of leukocytes. The major results are: (i) compliant cells
roll more stably, and have longer pauses due to reduced bond
force and increased bond lifetime, (ii) microvilli presentation
affects rolling characteristics by altering the step size, (iii)
adhesion force is concentrated in only 13 tethered microvilli
in the rear-most part of a cell, (iv) number of effective bonds
is much less than total adhesion bonds, (v) adhesion is via
7/31/2019 3D Computational Modeling and Simulation o
15/16
752 V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753
multiple tethers, each of which forms multiple selectin bonds,
but often one tether is sufficient to support rolling, (vi) force
loading on individual microvillus and selectin bond is not con-
tinuous, rather occurs is steps, (vii) peak force on a tethered
microvillus is much higher than that measured to cause tether
extrusion. Thus, both cell deformation and microvillus defor-
mation occur simultaneously during cell rolling, and need tobe considered in future computationalmodels.
Conflict of interest statement
None declared.
Acknowledgments
This research is partially supported by a Busch Biomedical
Grant from Rutgers University, and NSF Grant BES-0603035.
Computational support from National Center for Supercomput-
ing Applications at Urbana, IL is acknowledged. Authors thank
R.M. Kalluri and Sai Doddi for their help.
References
[1] T.A. Springer, Traffic signals on endothelium for lymphocyte
recirculation and leukocyte emigration, Annu. Rev. Physiol. 57 (1995)
827872.
[2] M.B. Lawrence, T.A. Springer, Leukocytes roll on a selectin at
physiologic flow rates: distinction from and prerequisite for adhesion
through integrins, Cell 65 (1991) 859873.
[3] L.J. Rinko, M.B. Lawrence, W.H. Guilford, The molecular mechanics
of P- and L-selectin lectin domains binding to PSGL-1, Biophys. J. 86
(2004) 544554.
[4] M.B. Kim, I.H. Sarelius, Role of shear forces and adhesion molecule
distribution on P-selectin-mediated leukocyte rolling in postcapillary
venules, Am. J. Physiol. Heart Circ. Physiol. 287 (2004) H2705H2711.[5] R. Alon, D.A. Hammer, T.A. Springer, Lifetime of the P-selectin-
carbohydrate bond and its response to tensile force in hydrodynamic
flow, Nature 374 (1995) 539542 (Erratum, Nature 376 (1995) 86).[6] M.J. Smith, E.L. Berg, M.B. Lawrence, A direct comparison of selectin-
mediated transient, adhesive events using high temporal resolution,
Biophys. J. 77 (1999) 33713383.
[7] E.Y. Park, M.J. Smith, E.S. Stropp, K.R. Snapp, J.A. DiVietro, W.F.
Walker, D.W. Schmidtke, S.L. Diamond, M.B. Lawrence, Comparison
of PSGL-1 microbead and neutrophil rolling: microvillus elongation
stabilizes P-selectin bond clusters, Biophys. J. 82 (2002) 18351847.[8] C. Dong, J. Cao, E.J. Struble, H.H. Lipowsky, Mechanics of leukocyte
deformation and adhesion to endothelium in shear flow, Ann. Biomed.
Eng. 27 (1999) 298312.
[9] T. Yago, A. Leppanen, H. Qiu, W.D. Marcus, M.U. Nollert, C. Zhu, R.D.
Cummings, R.P. McEver, Distinct molecular and cellular contributions to
stabilizing selectin-mediated rolling under flow, J. Cell Biol. 158 (2002)
787799.
[10] S. Chen, T.A. Springer, An automatic braking system that stabilizes
leukocyte rolling by an increase in selectin bond number with shear, J.
Cell Biol. 144 (1999) 185200.[11] R. Alon, S. Chen, R. Fuhlbrigge, K.D. Puri, T.A. Springer, The kinetics
and shear threshold of transient and rolling interactions of L-selectin
with its ligand on leukocytes, Proc. Natl. Acad. Sci. USA 95 (1998)
1163111636.
[12] M.B. Lawrence, G.S. Kansas, E.J. Kunkel, K. Ley, Threshold levels of
fluid shear promote leukocyte adhesion through selectins (CD62L,P,E),
J. Cell Biol. 136 (1997) 717727.[13] E.B. Finger, R.E. Bruehl, D.F. Bainton, T.A. Springer, A differential role
for cell shape in neutrophil tethering and rolling on endothelial selectins
under flow, J. Immunol. 157 (1996) 50855096.
[14] R.E. Bruehl, T.A. Springer, D.F. Bainton, Quantization of L-selectin
distribution on human leukocyte microvilli by immunogold labeling and
electron microscopy, J. Histochem. Cytochem. 44 (1996) 835844.
[15] U.H. von Andrian, S.R. Hasslen, R.D. Nelson, S.L. Erlandsen, E.C.
Butcher, A central role for microvillus receptor presentation in leukocyte
adhesion under flow, Cell 82 (1995) 989999.
[16] J.C. Firrell, H.H. Lipowsky, Leukocyte margination and deformation in
mesenteric venules of rat, Am. J. Physiol. 256 (1989) H1667H1674.[17] E.R. Damiano, J. Westheider, A. Tozeren, K. Ley, Variation in the
velocity, deformation, and adhesion energy density of leukocytes rolling
within venules, Circ. Res. 79 (1996) 11221130.
[18] E.B. Lomakina, C.M. Spillmann, M.R. King, R.E. Waugh, Rheological
analysis and measurement of neutrophil indentation, Biophys. J. 87
(2004) 42464258.
[19] D.A. Hammer, S.M. Apte, Simulation of cell rolling and adhesion on
surfaces in shear flow: general results and analysis of selectin-mediated
neutrophil adhesion, Biophys. J. 63 (1992) 3557.
[20] K.C. Chang, D.A. Hammer, Adhesive dynamics simulations of sialyl-
Lewisx/E-selectin-mediated rolling in a cell-free system, Biophys. J. 79
(2000) 18911902.
[21] K.C. Chang, D.F.J. Tees, D.A. Hammer, The state diagram for cell
adhesion under flow: leukocyte rolling and firm adhesion, Proc. Natl.
Acad. Sci. 97 (2000) 1126211267.[22] M.R. King, D.A. Hammer, Multiparticle adhesive dynamics. Interactions
between stably rolling cells, Biophys. J. 81 (2001) 799813.
[23] K.E. Caputo, D.A. Hammer, Effect of microvillus deformability on
leukocyte adhesion explored using adhesive dynamics simulations,
Biophys. J. 89 (2005) 187200.
[24] C. Dong, X. Lei, Biomechanics of cell rolling: shear flow, cell-surface
adhesion, and cell deformability, J. Biomech. 33 (2000) 3543.
[25] X. Lei, M.B. Lawrence, C. Dong, Influence of cell deformation on
leukocyte rolling adhesion in shear flow, J. Biomech. Eng. 121 (1999)
636664.
[26] N.A. NDri, W. Shyy, R. Tran-Son-Tay, Computational modeling of cell
adhesion and movement using a continuum-kinetics approach, Biophys.
J. 85 (2003) 22732286.
[27] D.B. Khismatullin, G.A. Truskey, Three-dimensional numerical
simulation of receptor-mediated leukocyte adhesion to surfaces: effectsof cell deformability and viscoelasticity, Phys. Fluids 17 (2005) 031505.
[28] D.B. Khismatullin, G.A. Truskey, A 3D numerical study of the effect of
channel height on leukocyte deformation and adhesion in parallel-plate
flow chambers, Microvasc. Res. 68 (2004) 188202.
[29] S. Jadhav, C.D. Eggleton, K. Konstantopoulos, A 3-D computational
model predicts that cell deformation affects selectin-mediated leukocyte
rolling, Biophys. J. 88 (2005) 96104.
[30] C.S. Peskin, D.M. McQueen, A 3-dimensional computational method
for blood-flow in the heart. 1. Immersed elastic fibers in a viscous
incompressible fluid, J. Comput. Phys. 81 (1989) 372405.
[31] G. Tryggvason, B. Bunner, A. Esmaeeli, N. Al-Rawahi, W. Tauber, J.
Han, S. Nas, Y. Jan, A front tracking method for the computations of
multiphase flow, J. Comput. Phys. 169 (2001) 708759.
[32] R. Mittal, G. Iaccarino, Immersed boundary methods, Annu. Rev. Fluid
Mech. 37 (2005) 239261.[33] C. Dong, R. Skalak, Leukocyte deformability: finite element modeling
of large viscoelastic deformation, J. Theor. Biol. 158 (1992) 173193.
[34] C. Dong, R. Skalak, K.L. Sung, G.W. Schmid-Schonbein, S. Chien,
Passive deformation analysis of human leukocytes, J. Biomech. Eng.
110 (1988) 2736.
[35] J.M. Charrier, S. Shrivastava, R. Wu, Free and constrained inflation
of elastic membranes in relation to thermoforming-non-axisymmetric
problems, J. Strain Anal. 24 (1989) 5574.
[36] M. Dembo, On Peeling an Adherent Cell from a Surface, Lectures
on Mathematics in the Life Sciences, Some Mathematical Problems in
Biology, vol. 26, American Mathematical Society, Providence, RI, 1994
pp. 5177.
[37] P. Bagchi, S. Balachandar, Steady planar straining flow past a rigid
sphere at moderate Reynolds numbers, J. Fluid Mech. 466 (2002)
365407.
7/31/2019 3D Computational Modeling and Simulation o
16/16
V. Pappu, P. Bagchi / Computers in Biology and Medicine 38 (2008) 738753 753
[38] S. Ramanujan, C. Pozrikidis, Deformation of liquid capsules enclosed
by elastic membranes in simple shear flow: large deformations and the
effect of fluid viscosities, J. Fluid Mech. 361 (1998) 117143.
[39] V. Ramachandran, M. Williams, T. Yago, D.W. Schmidtke, R.P. McEver,
Dynamic alterations of membrane tethers stabilize leukocyte rolling on
P-selectin, Proc. Natl. Acad. Sci. USA 101 (2004) 1351913524.
[40] S.D. House, H.H. Lipowsky, Leukocyte-endothelium adhesion:
microhemodynamics in mesentery of the cat, Microvasc. Res. 34 (1987)361379.
[41] D.W. Schmidtke, S.L. Diamond, Direct observation of membrane tethers
formed during neutrophil attachment to platelets or P-selectin under
physiological flow, J. Cell Biol. 149 (2000) 719729.
[42] Y. Zhao, S. Chien, R. Skalak, H.H. Lipowsky, Leukocyte rolling in rat
mesentery venules: distribution of adhesion bonds and the effects of
cytoactive agents, Ann. Biomed. Eng. 29 (2001) 360372.
[43] J.Y. Shao, H.P. Ting-Beall, R.M. Hochmuth, Static and dynamic
lengths of neutrophil microvilli, Proc. Natl. Acad. Sci. USA 95 (1998)
67976802.
[44] Y. Yu, J.Y. Shao, Simultaneous tether extraction contributes to neutrophil
rolling stabilization: a model study, Biophys. J. 92 (2007) 418429.
[45] G.I. Bell, Models for the specific adhesion of cells to cells, Science 200
(1978) 618627.
[46] R. Alon, S. Chen, K. Puri, E.B. Finger, T.A. Springer, The kinetics of
L-selectin tethers and the mechanics of selectin-mediated rolling, J. Cell
Biol. 138 (1997) 11691180.
[47] U.S. Scwarz, R. Alon, L-selectin-mediated leukocyte tethering in shear
flow is controlled by multiple contacts and cytoskeletal anchorage
facilitating fast rebinding events, Proc. Natl. Acad. Sci. 101 (2004)69406945.
[48] B.T. Marshall, K.K. Sarangapani, J. Wu, M.B. Lawrence, R.P. McEver,
C. Zhu, Measuring molecular elasticity by atomic force microscope
cantilever fluctuations, Biophys. J. 90 (2006) 681692.
[49] E.F. Krasik, D.A. Hammer, A semianalytic model of leukocyte rolling,
Biophys. J. 87 (2004) 29192930.
Prosenjit Bagchi received his PhD from the University of Illinois at Urbana-Champaign in 2002. Currently he is an assistant professor in Mechanical andAerospace Engineering at Rutgers University.
Vijay Pappu is a graduate student in Mechanical and Aerospace Engineeringat Rutgers University.