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Chapter 3. Stereochemistry. 1. Stereoisomerism 2. Chirality 3. Naming stereocenters - R/S configuration - working with R/S [ Home Page -Practice ] 4. Acyclic Molecules with 2 or more stereocenters 5. Cyclic Molecules with 2 or more stereocenters 6. Properties of Stereocenters - PowerPoint PPT Presentation
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1. Stereoisomerism
2. Chirality 3. Naming stereocenters - R/S configuration
- working with R/S [Home Page -Practice ]4. Acyclic Molecules with 2 or more stereocenters
5. Cyclic Molecules with 2 or more stereocenters
6. Properties of Stereocenters
7. Optical activity
8. Separation of Enantiomers, Resolution
9. Significance of Chirality in the biological world
StereochemistryStereochemistryOH
CH
H3C F
HO
CH
H3CF
21
Chapter 3
Looking for a change in the polarized plane
no change in the plane
achiral sample
rotates the plane
Looking for a change in the polarized plane
20
D
R-(+)-2-methyl-1-butanol
CH CH2OH
H3CH2C
H3C
D
20
S-(-)-2-methyl-1-butanol
CHHOH2C
CH2CH3
CH3
50/50 mixture of S and R 50% S(-5.75o) with 50% R(+5.75o)
net rotation = 0RACEMIC MIXTURE
Observed dependent on (conc.), (cell length), (temp.)
Specific Rotation
[]t = (degrees) l (dm) c (g/mL)
t = temperature = wavelengthl = path length (dm)c = concentration (g/mL)
Specific Rotation
[]t =l c
Example: A sample of 2 g in 10 mL of solutionmeasured in a 25 cm long cell gives an observed of +134o
The specific rotation is?
Specific Rotation
[]t =
[]t =
+268o
(+134o)2.5 (0.2)
(actually deg/cc2g-1)
Optical purity Absolutely pure (100%)
cholesterol has a specific rotation of -39o.
HO
synthetic sample may contain: the enantiomer - (or < -39o)
or a diastereomer - (or < -39o)
or other junk - (or < -39o)
Optical purity Absolutely pure cholesterol has
a specific rotation of -39o.
[-]t =
()1dm (1g pure)
observe = -39o
= -38.6o
= -35.1o
()1dm (?g+crap )[-]t =
= less than -39o
= -31.2o
(-35.1)1dm ( )[-]t =
(-31.2)1dm ( )[-]t =
1dm ( )[-]t = -38.6o
0.99g+0.01g
0.9g+0.1g
0.8g+0.2g
Pure (S)-(+)-2-bromobutanespecific rotation - +23.1o
But what if observe optical rotation = +9.2? Not pure, possibly a mix of R and S!!!!
CBrH
CH3
CH2CH3
+23.1o > +9.2o < 0o
Mix is between100% S and 50/50 (S/R)optical purity
optical purity = ----------------------observed (100%)
of pure enantiomer=
+9.2(100%)
+23.1
40% optical purity i.e. 40% excess of S isomer
40% excess = 40%S + (60%S/R mixture)
The sample has 70%S and 30%R
= 40%
Pure (S)-(+)-2-bromobutanespecific rotation - +23.1o
But what if observe optical rotation = +9.2? Not pure, possibly a mix of R and S!!!!
CBrH
CH3
CH2CH3
+ (30%S+30%R)
enantiomeric excess or ee (= optical purity)
ee =(moles 1 isomer) - (moles of other)
(moles of both enantiomers) X 100%
(.70) - (.30) (1.00)ee = X 100%
ee = 40%
Solution of 10 mL of 0.1 M R enantiomer 30 mL of 0.1 M S enantiomerobserved rotation = +4.8What is the specific rotation of each enantiomer?
Solution of 10 mL of 0.1 M R enantiomer 30 mL of 0.1 M S enantiomerobserved rotation = +4.8
What is the specific rotation of each enantiomer?
opt. purity = mole S - mole R(moles of S + R)
3 - 1 3 + 1
24
opt. purity = = = 50%
X = + 9.6 (S) observed +, S
=50%+4.8
X
What is the optical rotation of a sample of (+)-2-bromobutane ([]25 = +23.1) that is 75% optically pure? What percentage of (+) and (-) enantiomers are present in this sample?
What is the optical rotation of a sample of (+)-2-bromobutane that is 75% optically pure? What percentage of (+) and (-) enantiomers are present in this sample? ([]25 = +23.1)
[]
opt. purity = ee = 25o
D
23.1
75% =
(+)75% + racemic(+/-)
opt pure rotation mix (+)%/(-)% 75% +17.3 87.5/12.5
or (+)75% + (12.5%(+) +12.5%(-))or (+)87.5% / (-)12.5%
(S)-(+)-2-bromobutane, = +5.75
(+) or (-) a measured physical property - not predictable
NaOH
CO2H
C
CH3
HHOCO2
- +Na
C
CH3
HHO
(S)-(+)-lactic acid sodium (S)-(-)-lactate
These similar “S” compounds rotate light in the opposite direction.
Convert mixture of enantiomers - same properties
Resolution (separation):Resolution (separation):
TO diastereomers - different physical properties, can be separated.
R
R1
S
R1
ResolutionResolution
Rnon-separable
enantiomeric mixture
separate
S R
R1
new compoundsdiastereiomeric mixture
S
R1
+differentcompound
2 equivalentsR1
remove R1
remove R1
pure S
Rpure
Resolution by acid-base reactions
Pure-Sb
racemic mix
+
NH
C
H
H3CPh
H
CH3
CH
CF3
CO O
H
CH3C
CF3
CO O
NH
C
H
H3CPh
H
H
H
CH3C
H
CO O
NH
C
H
H3CPh
H
H
F3C
+
CH3C
F3C
CO
ON
H
CH
CH3
Ph
HHH
C
H3C
H
C
O
ON
H
CH
CH3
Ph
HHF3C
CH3 C
H
CF3
CO
O
CH3C
H
CF3C
O
O
remove amine
remove amine
Examples of enantiomerically pure bases
ResolutionResolution
(+)-cinchonine [R=H](+)-quinidine [R = OCH3]
H
N
HCH2=CH
N
HHO
CH2=CH
(-)-quinine
HHO
N
N
CH3O
H H
H
H
R
[]D = -127o HCCl3 from Strycnos seeds (S nux-vomica)
brucine
Strychnine no methoxy groups
N
N
O
H
H
O
H
H3CO
H3COH
H
N HH
H
O
HF
HOS
enantiomeric mixture
OHH
[] = 0
OHH
OHH
R
S
pure enantiomer
O
HF
ClS
OHH
S
OHH
R
R
S
S
S+
O
O
HFH
O
HFO
H
O
O
HFH
R
O
HFO
H
S
enantiomeric mixture
[] = 0
OHH
OHH
R
S
pure enantiomer
O
HF
ClS
[]25 = -8.2DOHH
R
O
HF
HO
+
OHH
S
O
HF
HO+
[]25 = +8.2D
H3C
CH2
H2C
CH2
H2C
C
C
OO
CH2
FH
CH3
OHH O
H
O
H
lipase
R-Enzyme
H3C
CH2
H2C
CH2
H2C
C
CO
OH
FH
>69%ee
CH3
H2C
CH2
H2C
CH2
C
CO
OH2C
FH
H3C
50/50 mix
H3C
CH2
H2C
CH2
H2C
C
CO
OCH2
FH
CH3
OHH O
H
O
H
lipase
R-Enzyme
H3C
CH2
H2C
CH2
H2C
C
CO
OH
FH
>69%ee
CH3
H2C
CH2
H2C
CH2
C
CO
OH2C
FH
H3C
CH3
H2C
CH2
H2C
CH2
C
CO
OH2C
FH
H3C
CH3
H2C
CH2
H2C
CH2
C
CO
OH2C
FH
H3C
CH3
H2C
CH2
H2C
CH2
C
CO
OH2C
FH
H3C A 50/50 enantiomeric mixture of esters
forms R-acid and recover S-ester.
CHEMICAL & ENGINEERING NEWS Oct 23, 2000 pg 55
Chiral Drugs Sales top $100 Billion
C&E NEWS Oct 1, 2001 pg 79
40% of all dosage-form drug sales in 2000 were single enantiomers.
(Now >>50% single enantiomer)
Some drugs are racemic mixtures, e.g. antidepressants:
Wellbutrin (bupropion, in Zyban)
Effexor (venlafaxine hydrochloride)
Cl
O
NtBuH
H3CO
(H3C)2N
OH.HCl
IbuprofenCH3C
CH3
C
H3C H
C
O
OH
H
S isomer particularly active, but R slowly converted to S
C CH3
H3C
C
CH3H
C
O
OH
H
Naproxen - S isomer
OCH3
CH3
-O2CH
Na+
(R enantiomer liver toxin)
R / S
N
H2C C C
H2C
CH3H3C
OH3C
C
O
CH2CH3
H N
CH2CC
CH2
H3C CH3
OCH3
C
O
H3CH2C
H
R \ S
analgesic DarvoN | NovraD antitussive2S,3R-propoxyphen | 2R,3S-propoxyphen
SS
R
N
O
O
NO H
OH
Thalidomide R- sedative, anti-inflammatory, Crohn’s disease S -teratogenic
N
O
ON
O H
O
N
O
O
NO
H
O H
(but thalidomide racemized in the body)