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Chapter 5. Viruses (at the threshold of life) 1. Discovery and Structure of viruses What is virus ? - virus : living things or not ? -> “organules” “molechisms” - Golden age of microbiology (1880 - 1915) -> increased understanding of infectious disease (tuberculosis, typhoid fever..) -> industrial utilization of microbes -> importance of microbes in environments Yet unknown causation of some disease (measles, chickenpox, polio, hepatitis) i dt f t k id tit f if ti di viruswas used to refer to unseen or unknown identity for infectious disease - bacterium for tuberculosis d b i ? bacterium for tuberculosis - protozoan for malaria caused by virus ? The true nature of virus remained a mystery

1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

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Page 1: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

1. Discovery and Structure of viruses

What is virus ?

- virus : living things or not ? -> “organules” “molechisms”

- Golden age of microbiology (1880 - 1915)

-> increased understanding of infectious disease (tuberculosis, typhoid fever..)

-> industrial utilization of microbes

-> importance of microbes in environments

Yet unknown causation of some disease (measles, chickenpox, polio, hepatitis)

“ i ” d t f t k id tit f i f ti di“virus” was used to refer to unseen or unknown identity for infectious disease

- bacterium for tuberculosis d b i ?bacterium for tuberculosis- protozoan for malaria

caused by virus ?

The true nature of virus remained a mystery

Page 2: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

1) Development of virology1) Development of virology

- 1892, Dmitri Iwanowski :

-> attempting to isolate bacterial cause of tobacco mosaic diseasep g

-> use filter to trap smallest known bacteria

-> filtered juice contained infectious agent -> called filterable virus

- 1898, Martinus Beijerinck , j

-> diluted filtered juice -> still infectious -> called contagious living fluid

- 1930s, Wendell M. Stanley : crystalization of tobacco mosaic virus

-> implies that TMV is chemical molecule> implies that TMV is chemical molecule

-> viral disease caused fever, a response by immune system or other symptom

- 1933, electron microscope 발명 -> TMV 전자사진

Page 3: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

2) Structure of viruses2) Structure of viruses

- size : 27nm(poliovirus) ~ 250nm(smallpox virus)

- 500 or more viruses fit inside a single bacterial cellg

Page 4: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

2) Structure of viruses2) Structure of viruses

- shape : helical, icosahedral, complex type

HIV

Page 5: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

3) Component of viruses3) Component of viruses

- genome : core of nucleic acid

-> DNA or RNA, not both

-> long and helical, or folded

-> single molecule, occasionally segmented

- capsid : coat of protein -> consisted of capsomerescaps p capsom r s- nucleocapsid : combination of genome and capsid

- envelope : membrane-like envelope enclosing nucleocapsid

- no cytoplasmno cytoplasm

☞ spikes : projections on the envelope

-> contacting virus to its host

-> assist penetration into host cell

Page 6: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

Page 7: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

☞ 생물체로서의 미생물의 특징

- 성장을 위한 영양분의 흡수, 소화

소화산물의 배설- 소화산물의 배설

- 독립적 생식능력

- 환경변화에 대한 적응능력

생물계 구성원의 공통특징

- 자극에 대한 반응능력

☞ virus의 생화학적 특징- no chemistry going on within a virus

- no intake of nutrientno intake of nutrient

- no production of waste

- no increase or decrease in size

- no metabolism

- but, they replicate

-> programs a host cell biochemically to produce hundreds of copiesp g y p p

Page 8: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)2 Viral replication2. Viral replication

- virus : inert particle outside a host cell

-> becomes highly efficient replicating machine in the host cell

-> utilize metabolism of the cell-> utilize metabolism of the cell

-> produces multiple copies of itself in several stages

1) Stages of replication(1) attachment stage

- high degree of specificity for a certain host

- 1. protein molecule in envelope keys off receptor sites(lock) in the host cell

- 2. or viral tail attaches to receptor sites

- 3. or blending of viral envelope with host cell membrane

- 4. or by phagocytosis

Page 9: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

X 200,000

Viral attachmnet

X 70,000

Page 10: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

(2) penetration stage

- nonenveloped virus is left outside the host cell, the genome passes into the cell

(3) uncoating stage

- within the cell, cellular protein removes the protein capsid from the viral genome

(4) synthesis stage

- viral proteins are synthesized from viral genome using cellular machinery

(5) assembly stage

- viral parts are combined to form new viral particles after synthesis is completed

(6) release stage

- viral envelope is built from cellular membrane

-> disrupt cell membrane => lytic cycle

Page 11: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Replication of Enveloped virusReplication of Enveloped virusp pp p

Page 12: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Cli k iClick to view animation.

animation

Page 13: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Unenveloped virusUnenveloped virus

Page 14: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

2) L tic and l s enic c cle2) Lytic and lysogenic cycle

- some times, virus enters a host cell but do not replicate immediately =>lysogeny- lysogenic cycle : y g y

-> virus incorporates its genes into the host genes and becomes part of it

-> multiply together with host genes => becomes provirus(oncogene)

Page 15: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

Lytic and lysogenic cycleLytic and lysogenic cycle

Page 16: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

Lysogenic and lytic cycleLysogenic and lytic cycle

Cli k i Cli k iClick to view animation.

Click to view animation.

animation

Page 17: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)3) Viriods and prions3) Viriods and prions

- Viriods : single-stranded molecules of RNA without protein coat

-> infect plants causing disease

- Prions : proteineous infectious particle

-> composed solely of protein, extremely stable

-> transformed from prion protein(PrP, harmless protein in itself in brain cell)

-> PrP : protect cells by helping rid of dangerous chemicals

-> prion : clump together -> block molecular traffic

3 Viruses and Cancer3. Viruses and Cancer- Cancer : results from uncontrolled reproduction of cells

-> grows into abnormal, functionless mass of cells => tumor- body’s response to the tumor

-> surrounding it with a capsule of connective tissue => benign-> outgrowth and break out of the capsule and spread => malignant

- Properties of cancer cell differing from normal cells

-> more rapid growth than normal cell

-> stick together less firmly than...

-> undergo dedifferentiation (reverting to an early stage to divide indefinitely

-> fail to exhibit contact inhibition -> not stop growing when contacted

Page 18: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

Contact inhibitionContact inhibition

Page 19: 1. Discovery and Structure of viruseswebbuild.knu.ac.kr/~app-mic/resources/lecture... · 2015-08-31 · -> diluted filtered juice -> still infectious -> called contagious living fluid-1930s,

Chapter 5. Viruses (at the threshold of life)

☞ How viruses transform cells☞ How viruses transform cells

- oncogene : transforming genes normally reside in the chromosomal DNA of cells

-> not viral in origin but part of the genetic endowment

> over 60 oncogenes were identified-> over 60 oncogenes were identified

- proto-oncogene : fore-runners of oncogenes

-> can be converted to oncogenes by carcinogens including viruses