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© 2006 Brooks/Cole - Thomson
Chemistry and Chemical Reactivity 6th Edition
John C. Kotz Paul M. Treichel
Gabriela C. Weaver
CHAPTER 9
Bonding and Molecular Structure:Fundamental Concepts
© 2006 Brooks/Cole Thomson
Lectures written by John Kotz
cellE
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© 2006 Brooks/Cole - Thomson
Chemical Bonding
Problems and questions —How is a molecule or
polyatomic ion held together?
Why are atoms distributed at strange angles?
Why are molecules not flat?Can we predict the structure?How is structure related to
chemical and physical properties?
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Structure & Bonding
NN triple bond. Molecule is unreactive
Phosphorus is a tetrahedron of P atoms. Very reactive!
Red phosphorus, a polymer. Used in matches.
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Forms of Chemical Bonds
• There are 2 extreme forms of connecting or bonding atoms:
• Ionic—complete transfer of 1 or more electrons from one atom to another
• Covalent—some valence electrons shared between atoms
• Most bonds are somewhere in between.
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Ionic CompoundsMetal
Nonmetal
2 Na(s) + Cl2(g) ---> 2 Na+ + 2 Cl-
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Covalent BondingThe bond arises from the mutual attraction of
2 nuclei for the same electrons. Electron sharing results.
Bond is a balance of attractive and repulsive forces.
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Bond FormationA bond can result from a “head-to-head”
overlap of atomic orbitals on neighboring atoms.
ClH H Cl••
••
••
••
••
••
+
Overlap of H (1s) and Cl (3p)
Note that each atom has a single, unpaired electron.
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Chemical Bonding: Objectives
Objectives are to understand:
1. valence e- distribution in molecules and ions.
2. molecular structures3. bond properties and their
effect on molecular properties.
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Electron Distribution in Molecules
• Electron distribution is
depicted with Lewis electron dot structures
• Valence electrons are distributed as shared or BOND PAIRS and unshared or LONE PAIRS.
G. N. Lewis 1875 - 1946
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Bond and Lone Pairs• Valence electrons are distributed as
shared or BOND PAIRS and unshared or LONE PAIRS.
•
••
•
••
H Cllone pair (LP)
shared orbond pair
This is called a LEWIS ELECTRON DOT structure.
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Valence ElectronsElectrons are divided between core and valence
electronsB 1s2 2s2 2p1
Core = [He] , valence = 2s2 2p1
Br [Ar] 3d10 4s2 4p5
Core = [Ar] 3d10 , valence = 4s2 4p5
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Rules of the GameNo. of valence electrons of a main
group atom = Group number
•For Groups 1A-4A, no. of bond pairs = group number.
• For Groups 5A -7A, BP’s = 8 - Grp. No.
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Rules of the Game•Except for H (and sometimes atoms of 2nd and 3rd families and 3rd and higher periods),
BP’s + LP’s = 4
This observation is called the
OCTET RULE
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Building a Dot StructureAmmonia, NH3
1. Decide on the central atom; never H. Central atom is atom of lowest affinity
for electrons. Therefore, N is central2. Count valence electrons H = 1 and N = 5 Total = (3 x 1) + 5 = 8 electrons / 4 pairs
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3. Form a single bond between the central atom and each surrounding atom
H H
H
N
Building a Dot Structure
H••
H
H
N4. Remaining electrons form LONE PAIRS to complete octet as needed.
3 BOND PAIRS and 1 LONE PAIR.
Note that N has a share in 4 pairs (8 electrons), while H shares 1 pair.
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10 pairs of electrons are now left.
Sulfite ion, SO32-
Step 1. Central atom = SStep 2. Count valence electrons
S = 6 3 x O = 3 x 6 = 18 Negative charge = 2
TOTAL = 26 e- or 13 pairsStep 3. Form bonds
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Sulfite ion, SO32-
Remaining pairs become lone pairs, first on outside atoms and then on central atom.
O O
O
S••
••
••
••
•• ••
••
••
••
••
Each atom is surrounded by an octet of electrons.
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Carbon Dioxide, CO2
1. Central atom = _______2. Valence electrons = __ or __ pairs3. Form bonds.
4. Place lone pairs on outer atoms.
This leaves 6 pairs.
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Carbon Dioxide, CO2
4. Place lone pairs on outer atoms.
The second bonding pair forms a pi (π) bond.
5. So that C has an octet, we shall form DOUBLE BONDS between C and O.
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Double and even triple bonds are commonly observed for C, N, P, O, and S
H2CO
SO3
C2F4
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Sulfur Dioxide, SO2
1. Central atom = S2. Valence electrons = 18 or 9 pairs
bring inleft pair
OR bring inright pair
3. Form double bond so that S has an octet — but note that there are two ways of doing this.
•• OS
••
••
••
••••••O
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Sulfur Dioxide, SO2
This leads to the following structures.
These equivalent structures are called RESONANCE STRUCTURES. The true electronic structure is a HYBRID of the two.
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Formal Atom Charges
• Atoms in molecules often bear a charge (+ or -). • The predominant resonance structure of a
molecule is the one with charges as close to 0 as possible.
• Formal charge = Group number – 1/2 (no. of bonding electrons)
- (no. of LP electrons)
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••
••O OC
••••
+4 - (1/2)(8) - 0 = 0
+6 - (1/2)(4) - 4 = 0
Carbon Dioxide, CO2
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Thiocyanate Ion, SCN-
6 - (1/2)(2) - 6 = -1 5 - (1/2)(6) - 2 = 0
4 - (1/2)(8) - 0 = 0
••
•
••S NC
•••
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Thiocyanate Ion, SCN-
••
•
••S NC
•••
••
•
••S NC
•••
•••
••S NC
•••
Which is the most important resonance form?
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Calculated Partial Charges in SCN-
All atoms negative, but most on the S
••
•
••S NC
•••
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Violations of the Octet Rule
Usually occurs with B and elements of higher periods.
BF3 SF4
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Boron Trifluoride• Central atom = _____________• Valence electrons = __________ or
electron pairs = __________• Assemble dot structure
The B atom has a share in only 6 pairs of electrons (or 3 pairs). B atom in many molecules is electron deficient.
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Boron Trifluoride, BF3
What if we form a B—F double bond to satisfy the B atom octet?
F••
••
••
F
F
B••
••
••
••
••
+1
-1
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Sulfur Tetrafluoride, SF4• Central atom =
• Valence electrons = ___ or ___ pairs.• Form sigma bonds and distribute electron
pairs.
5 pairs around the S atom. A common occurrence outside the 2nd period.
MOLECULAR GEOMETRY
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VSEPR • Valence Shell Electron
Pair Repulsion theory.• Most important factor in
determining geometry is relative repulsion between electron pairs.
Molecule adopts the shape that minimizes the electron pair repulsions.
MOLECULAR GEOMETRY
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Electron Pair GeometriesActive Figure 9.8
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Electron Pair GeometriesActive Figure 9.8
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Structure Determination by
VSEPRAmmonia, NH3
1. Draw electron dot structure2. Count BP’s and LP’s = 4
H••
H
H
N
3. The 4 electron pairs are at the corners of a tetrahedron.
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Structure Determination by
VSEPRAmmonia, NH3
There are 4 electron pairs at the corners of a tetrahedron.
The ELECTRON PAIR GEOMETRY is tetrahedral.
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Ammonia, NH3
The electron pair geometry is tetrahedral.
Structure Determination by
VSEPR
The MOLECULAR GEOMETRY — the positions of the atoms — is PYRAMIDAL.
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Structure Determination by
VSEPRWater, H2O
1. Draw electron dot structure
The electron pair geometry is TETRAHEDRAL.
2. Count BP’s and LP’s = 4
3. The 4 electron pairs are at the corners of a tetrahedron.
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Structure Determination by
VSEPRWater, H2O
The electron pair geometry is TETRAHEDRAL
The molecular geometry is BENT.
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Geometries for Four Electron Pairs
Figure 9.9
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Structure Determination by
VSEPRFormaldehyde, CH2O
1. Draw electron dot structure
The electron pair geometry is PLANAR TRIGONAL with 120o bond angles.
••
C HH
O••
••
CHH
O••
2. Count BP’s and LP’s at C3. There are 3 electron “lumps” around C at the corners of a planar triangle.
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Structure Determination by
VSEPRFormaldehyde, CH2O
The electron pair geometry is PLANAR TRIGONAL
The molecular geometry is also planar trigonal.
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H-C-H = 109o
C-O-H = 109o
In both cases the atom is surrounded by 4 electron pairs.
Structure Determination by
VSEPRH
H
••
••H—C—O—H
109˚ 109˚
Methanol, CH3OH
Define H-C-H and C-O-H bond angles
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Structure Determination by
VSEPRAcetonitrile, CH3CN
••
H
H
H—C—C N
180˚109˚H-C-H = 109o C-C-N = 180o
One C is surrounded by 4 electron “lumps” and the other by 2 “lumps”
Define unique bond angles
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Phenylalanine, an amino acid
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Phenylalanine
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Structures with Central Atoms with More Than or Less Than 4 Electron Pairs
Often occurs with Group 3A elements and with those of 3rd period and higher.
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Boron Compounds
Consider boron trifluoride, BF3
Geometry described as
planar trigonal
The B atom is surrounded by only 3 electron pairs.
Bond angles are 120o
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5 electron pairs
Compounds with 5 or 6 Pairs Around the Central Atom
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Molecular Geometries for Five Electron
PairsFigure 9.11
All based on trigonal bipyramid
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• Number of valence electrons = 34
• Central atom = S• Dot structure
Sulfur Tetrafluoride, SF4
Electron pair geometry--> trigonal bipyramid (because there are 5 pairs around the S)
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Lone pair is in the equator because it requires more room.
Sulfur Tetrafluoride, SF4
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Molecular Geometries
for Six Electron
PairsFigure 9.14
All are based on the 8-sided octahedron
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6 electron pairs
Compounds with 5 or 6 Pairs Around the Central Atom
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Bond Properties• What is the effect of bonding and structure on
molecular properties?
Free rotation around C–C single bond
No rotation around C=C double bond
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Bond Order # of bonds between a pair of atoms
Double bondSingle bond
Triple bond
Acrylonitrile
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Bond OrderFractional bond orders occur in molecules with resonance
structures.
Consider NO2-
The N—O bond order = 1.5
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Bond OrderBond order is proportional to two important bond
properties:
(a) bond strength(b) bond length
745 kJ
414 kJ
110 pm
123 pm
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Bond LengthBond length depends on
size of bonded atoms.
H—F
H—Cl
H—I
Bond distances measured in Angstrom units where 1 A = 10-2 pm.
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Bond length depends on bond order.
Bond distances measured in Angstrom units where 1 A = 10-2 pm.
Bond Length
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• —measured by the energy req’d to break a bond. See Table 9.10.
• BOND STRENGTH (kJ/mol) H—H 436 C—C 346 C=C 602 CC 835 NN 945
The GREATER the number of bonds (bond order) the HIGHER the bond strength and the SHORTER the bond.
Bond Strength
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Bond Order Length Strength
HO—OH
O=O
1 142 pm 210 kJ/mol
2 121 498
1.5 128 ?
Bond Strength
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Molecular Polarity
Why do ionic compounds dissolve in water?
WaterBoiling point =
100 ˚C
MethaneBoiling point
= -161 ˚C
Why do water and methane differ so much in their
boiling points?
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Bond Polarity
HCl is POLAR because it has a positive end and a negative end.
Cl has a greater share in bonding electrons than does H.
Cl has slight negative charge (-d) and H has slight positive charge (+ d)
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Bond Polarity
• Three molecules with polar, covalent bonds.
• Each bond has one atom with a slight negative charge (-d) and and another with a slight positive charge (+ d)
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This model, calc’d using CAChe
software for molecular
calculations, shows that H is +
(red) and Cl is - (yellow). Calc’d
charge is + or - 0.20.
Bond Polarity
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Due to the bond polarity, the H—Cl bond energy is GREATER than expected for a “pure” covalent bond.
BOND ENERGY“pure” bond339 kJ/mol calc’dreal bond 432 kJ/mol measured
Difference = 92 kJ. This difference is proportional to the difference in
ELECTRONEGATIVITY, .
Bond Polarity
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Electronegativity, is a measure of the ability of an atom in a
molecule to attract electrons to itself.
Concept proposed by Linus Pauling 1901-1994
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Linus Pauling, 1901-1994
The only person to receive two unshared Nobel prizes (for Peace and Chemistry).
Chemistry areas: bonding, electronegativity, protein structure
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ElectronegativityFigure 9.14
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• F has maximum .• Atom with lowest is the center atom in
most molecules.• Relative values of determine BOND
POLARITY (and point of attack on a molecule).
Electronegativity,
See Figure 9.14
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Bond PolarityWhich bond is more polar (or DIPOLAR)? O—H O—F 3.5 - 2.1 3.5 - 4.0 1.4 0.5 OH is more polar than OF
and polarity is “reversed.”
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Molecular PolarityMolecules—such as HI and H2O—
can be POLAR (or dipolar).
They have a DIPOLE MOMENT. The polar HCl molecule will turn to align with an electric field.
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Molecular PolarityThe magnitude of the dipole is
given in Debye units.
Named for Peter Debye
(1884 - 1966). Rec’d 1936
Nobel prize for work on x-
ray diffraction and dipole
moments.
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Dipole Moments
Why are some molecules polar but others are not?
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Molecular PolarityMolecules will be polar ifa)bonds are polar ANDb) the molecule is NOT “symmetric”
All above are NOT polar
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Polar or Nonpolar?Compare CO2 and H2O. Which one is polar?
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Carbon Dioxide
• CO2 is NOT polar even though the CO bonds are polar.
• CO2 is symmetrical.
+1.5 -0.75-0.75
Positive C atom is reason CO2 and H2O react to give H2CO3
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Polar or Nonpolar?• Consider AB3 molecules: BF3, Cl2CO, and NH3.
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Molecular Polarity, BF3
B atom is positive and F atoms are negative.
B—F bonds in BF3 are polar.
But molecule is symmetrical and NOT polar
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Molecular Polarity, HBF2
B atom is positive but H & F atoms are negative.
B—F and B—H bonds in HBF2 are polar. But molecule is NOT symmetrical and is polar.
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Is Methane, CH4, Polar?
Methane is symmetrical and is NOT polar.
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Is CH3F Polar?
C—F bond is very polar. Molecule is not symmetrical and so is polar.
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CH4 … CCl4
Polar or Not?
• Only CH4 and CCl4 are NOT polar. These are the only two molecules that are “symmetrical.”
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Substituted Ethylene
• C—F bonds are MUCH more polar than C—H bonds.
• Because both C—F bonds are on same side of molecule, molecule is POLAR.
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Substituted Ethylene
• C—F bonds are MUCH more polar than C—H bonds.
• Because both C—F bonds are on opposing ends of molecule, molecule is NOT POLAR.