0.1 substitution / site Ascidia ahodori Saccoglossus pusillus Balanoglossus carnosus Ptychodera flava Strongylocentrotus purpuratus Asterias amurensis Antedon serrata Branchiostoma floridae Petromyzon marinus Raja schmidti Xenopus laevis Danio rerio Chrysemys sp. Anolis carolinensis Homo sapiens Gallus gallus Oikopleura sp. Oikopleura labradorensis Oikopleura dioica Megalocercus huxleyi Molgula occidentalis Molgula complanata Molgula retortiformis Molgula manhattensis Molgula provisionalis Molgula arenata Molgula pugetiensis Molgula pacifica Molgula oculata Molgula citrina Molgula occulta Molgula bleizi Microcosmus squamiger Microcosmus sabatieri Microcosmus polymorphus Halocynthia roretzi Halocynthia spinosa Halocynthia igaboja Boltenia villosa Pyura dura Pyura haustor Herdmania sp. Herdmania momus Herdmania curvata Pyura gangelion Cnemidocarpa humilis Pelonaia corrugata Styela gibbsii Styela plicata Styela montereyensis Metandrocarpa taylori Symplegma viride Polycarpa pomaria Dendrodoa grossularia Polycarpa papillata Polycarpa mytiligera Cnemidocarpa finmarkiensis Botryllus schlosseri* Botryllus schlosseri Botrylloides violaceus Botryllus planus Ciona savignyi Ciona intestinalis Megalodicopia hians Chelyosoma siboja Corella inflata Corella eumyota Ascidiella sp. Ecteinascidia turbinata Perophora viridis Perophora sagamiensis Ecteinascidia herdmanni Phallusia nigra Ascidia ceratodes Phallusia mammilata Phallusia fumigata Doliolum nationalis Doliolum denticulata Pyrosomella verticillata Pyrosoma atlanticum Pyrosoma godeauxi Ihlea racovitzai Cyclosalpa quadriluminis Thalia democratica Salpa thompsoni Salpa cylindica Pycnoclavella aff. detorta Clavelina meridionalis Distaplia dubia Aplidium pliciferum Eudistoma gilboviride Cystodytes sp . Leptoclinides madara Didemnum molle Didemnum sp. AB211072 Didemnum sp. AB211073 Trididemnum paracyclops Lissoclinum punctatum Lissoclinum bistratum Lissoclinum patella Lissoclinum sp. Lissoclinum timorense Lissoclinum badium Diplosoma ooru Diplosoma simileguwa Diplosoma mitsukurii Diplosoma simile Diplosoma sp. AB211121 Diplosoma virens Diplosoma sp. AB211116 1/1/1/99 1/1/1/100 1/1/1/100 1/1/1/77 1/1/1/97 0.99/1/1/90 1/1/1/86 1/1/1/100 1/1/1/100 1/1/1/100 1/1/1/100 1/1/1/95 1/1/1/100 1/1/1/100 1/1/1/100 1/1/1/97 1/1/1/100 0.99/-/0.99/- APLOUSOBRANCHIA THALIACEA PHLEBOBRANCHIA STOLIDOBRANCHIA APPENDICULARIA 0.87/-/-/54 0.58/-/-/-

0.1 substitution / site

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Saccoglossus pusillus. Balanoglossus carnosus. Ptychodera flava. Strongylocentrotus purpuratus. Asterias amurensis. Antedon serrata. Branchiostoma floridae. Petromyzon marinus. Raja schmidti. Xenopus laevis. Danio rerio. Chrysemys sp. Anolis carolinensis. Homo sapiens. Gallus gallus. - PowerPoint PPT Presentation

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0.1 substitution / site

Ascidia ahodori

Saccoglossus pusillusBalanoglossus carnosus

Ptychodera flavaStrongylocentrotus purpuratus

Asterias amurensisAntedon serrata

Branchiostoma floridaePetromyzon marinusRaja schmidtiXenopus laevis

Danio rerioChrysemys sp.Anolis carolinensis

Homo sapiensGallus gallus

Oikopleura sp.Oikopleura labradorensisOikopleura dioicaMegalocercus huxleyiMolgula occidentalisMolgula complanataMolgula retortiformisMolgula manhattensisMolgula provisionalisMolgula arenataMolgula pugetiensisMolgula pacificaMolgula oculataMolgula citrinaMolgula occultaMolgula bleizi

Microcosmus squamigerMicrocosmus sabatieriMicrocosmus polymorphus

Halocynthia roretziHalocynthia spinosaHalocynthia igaboja

Boltenia villosaPyura dura

Pyura haustorHerdmania sp.

Herdmania momusHerdmania curvata

Pyura gangelionCnemidocarpa humilis

Pelonaia corrugataStyela gibbsiiStyela plicataStyela montereyensisMetandrocarpa tayloriSymplegma viridePolycarpa pomariaDendrodoa grossulariaPolycarpa papillataPolycarpa mytiligeraCnemidocarpa finmarkiensisBotryllus schlosseri*Botryllus schlosseriBotrylloides violaceusBotryllus planus

Ciona savignyiCiona intestinalisMegalodicopia hians

Chelyosoma sibojaCorella inflataCorella eumyota

Ascidiella sp.Ecteinascidia turbinata

Perophora viridisPerophora sagamiensisEcteinascidia herdmanni

Phallusia nigraAscidia ceratodes

Phallusia mammilataPhallusia fumigata

Doliolum nationalisDoliolum denticulata

Pyrosomella verticillataPyrosoma atlanticum

Pyrosoma godeauxiIhlea racovitzaiCyclosalpa quadriluminis

Thalia democraticaSalpa thompsoniSalpa cylindica

Pycnoclavella aff. detortaClavelina meridionalis

Distaplia dubiaAplidium pliciferum