9
-140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) 0 2000 4000 6000 8000 10000 0.0 0.2 0.4 0.6 0.8 1.0 popen Tim e (m s) 0 2000 4000 6000 8000 10000 0.0 0.2 0.4 0.6 0.8 1.0 popen Tim e (m s) 0 2000 4000 6000 8000 10000 0.0 0.2 0.4 0.6 0.8 1.0 popen Tim e (m s) 0 2000 4000 6000 8000 10000 0.0 0.2 0.4 0.6 0.8 1.0 popen Tim e (m s) (n=12 ) = ( ) ( ) × × ¿ h ¿ # of channels = 8

-140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

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Page 1: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

-140 mV to -80 mV

-140 mV to -60 mV -140 mV to -50 mV

-140 mV to -100 mV(n=12 ) (n=9)

(n=20 )(n=26 )

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

(n=12 )

𝑝𝑜𝑝𝑒𝑛=𝑇𝑜𝑡𝑎𝑙𝐶𝑢𝑟𝑟𝑒𝑛𝑡 (𝑝𝐴)

𝑐𝑢𝑟𝑟𝑒𝑛𝑡 𝑗𝑢𝑚𝑝 (𝑝𝐴 )×𝑡𝑟𝑖𝑎𝑙𝑠× ¿𝑜𝑓 h𝑐 𝑎𝑛𝑛𝑒𝑙𝑠 ¿ # of channels = 8

Page 2: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

-140 mV to -40 mV-140 mV to +30 mV

-140 mV to +40 mV -140 mV to +60 mV

(n=18 ) (n=12 )

(n=13 ) (n=13 )

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

popen

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

Page 3: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

-140 mV to +80 mV -140 mV to +90 mV

-140 mV to +100 mV-140 mV to +110 mV

(n=23 ) (n=21 )

(n=15 )(n=14 )

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

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0.8

1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

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1.0

pope

n

Time (ms)

0 2000 4000 6000 8000 100000.0

0.2

0.4

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1.0

pope

n

Time (ms)

Page 4: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

-140 mV

-100 mV

-80 mV

+40 mV

+ 80 mV+ 100 mV

-40 mV

-140 mV

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

+40 mV +80 mV +100 mV

0 2000 4000 6000 8000 100000.0

0.2

0.4

0.6

0.8

1.0

pope

n

Time (ms)

-100 mv -80 mV -40 mV

-150 -100 -50 0 50 100 1500

0.10.20.30.40.50.60.70.80.9

1

Voltage (mV)

pop

en_s

s

Page 5: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

V (V) I (pA) theoretical-0.14 -5.9 -8.0-0.1 -5 -5.6

-0.08 -4 -4.4-0.06 -3.2-0.05 -2.5 -2.6-0.04 -2.1 -2.00.03 2.30.04 3 2.90.06 4 4.10.08 6.2 5.30.09 6.6 5.90.1 7.8 6.50.11 8 7.1

-0.15 -0.1 -0.05 0 0.05 0.1 0.15

-8

-6

-4

-2

0

2

4

6

8

f(x) = 60.7008086253369 x + 0.448247978436658R² = 0.998671982935847

Voltage (V)

Cu

rren

t (p

A)

Previously reported as 89pS (20140827), we find out it is closer to be 60.7 pS (20150423). This discrepancy can be somewhat explained by the program algorithm in Clampfit which requires two consecutive flat lines. With high amount of NaChBac channels, this is difficult to observe, and when it is observed, it is generally when two channels are closed at the same time.

what the program looks for what tends to be the case

Studer (2009) reports 120 pS with 150 mM NaCl, 20mM NaCH3CO2. His bilayer was POPE:POPC (3:7).

pAms

pAms

Page 6: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

150 mM NaCl in Cis and Trans

0 10 20 30 40 50 60 70 80 90 100

40

50

60

70

40

50

60

70

20

30

40

50

60

20

30

40

50

10

20

30

40

50

0

10

20

30

40

-30

-20

-10

0

-40

-30

-20

-10

0

-30

-20

-10

0

10

0 10 20 30 40 50 60 70 80 90 100

-30

-20

-10

0

cu

rre

nt (p

A)

Time (ms)

+110 mV

pA pA

cu

rre

nt (p

A)

+100 mV

pA

+90 mV

cu

rre

nt (p

A)

pA

pA

cu

rre

nt (p

A)

+80 mV

pApA

cu

rre

nt (p

A)

+60 mV

cu

rre

nt (p

A)

+40 mV

pA

cu

rre

nt (p

A)

-50 mV -80 mV

cu

rre

nt (p

A)

pA

cu

rre

nt (p

A)

-100 mV

pA

cu

rre

nt (p

A)

Time (ms)

-140 mV

Filter: 8 pole Bessel 1000 Hz cutoffSampling interval: 50µs

-20pA/-2.5pA = 8 protein channels

Page 7: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

0 10 20 30 40 50-40

-20

0

20

40

60

0 10 20 30 40 50-40

-20

0

20

40

60curr

ent (p

A)

Time (ms)

NaCl +60 mV NaCl +40 mV NaCl -40 mV

curr

ent (p

A)

Time (ms)

KCL +60 mV KCl +40 mV KCl -40 mV

Cis and trans chamber are filled with either1) 150 mM NaCl, 10mM Tris 7.42) 150 mM KCl, 20 mM HEPES 7.4

Recorded 1 second after voltage was set

P Na/P K = 171 ± 16 (n = 8)from Ren et al., 2001

Page 8: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

40

50

60

70

0 50 100

20

30

40

50

0 50 100

-40

-30

-20

= 3.9 pA

cu

rre

nt

(pA

) +60 mV

= 5.9 pA

cu

rre

nt

(pA

) +40 mV

= - 3.4 pA

cu

rre

nt

(pA

)

Time (ms)

-40 mV

-0.06 -0.04 -0.02 0 0.02 0.04 0.06 0.08

-4

-2

0

2

4

6

8

f(x) = 92.5 x + 0.283333333333333R² = 0.999756572541383

150 mM KCl in Cis and Trans

~ 60.8pA/5.9pA = 10.3 channels

Page 9: -140 mV to -80 mV -140 mV to -60 mV -140 mV to -50 mV -140 mV to -100 mV (n=12 ) (n=9) (n=20 ) (n=26 ) (n=12 ) # of channels = 8

0 10 20 30 40 500

7

14

22

29

36

43

50

58

65

0.5mM/0mM

curr

en

t (p

A)

Time (ms)

0 10 20 30 40 500

7

14

22

29

36

43

50

58

65

0.5mM/0.5mMcurr

en

t (p

A)

Time (ms)

0 10 20 30 40 500

7

14

22

29

36

43

50

58

65

10.3mM/10.3mM

curr

en

t (p

A)

Time (ms)

0 10 20 30 40 500

5

10

15

20

25

30

35

40

45

50

55

60

65

10.3mM/10.3mM

curr

en

t (p

A)

Time (ms)

150 mM KCl Cis/TransCis / trans blocker: Ni+recorded 1 second after voltage

150 mM KCl Cis/Trans+60 and -60 mV voltage appliedover 10 seconds