Protein Denaturation

Protein Denaturation

FDSC400

Goals

• Denaturation• Balance of forces• Consequences of denaturation

Effect of Temperature on Rate of Enzyme Action

rate

denaturant

Denaturation

• Denaturation is a phenomenon that involves transformation of a well-defined, folded structure of a protein, formed under physiological conditions, to an unfolded state under non-physiological conditions.– Occurs suddenly and completely over a narrow

range of conditions– Slowly reversible (if at all)

Hydrophobic Interactions““Clathrate” Clathrate” waterwater

Peptide chainPeptide chain

Increased chain entropy

Increased solvent entropy

Chain Entropy

S=k ln

Increased chain entropy

One native state

Many denatured states

Other Factors

• Hydrogen bonds• Electrostatic interactions

Consider how the total number and strength of these bonds changes as a result of denaturation

Balance of Forces

Chain entropy

Solvent entropy

other forces

G=H-TS

G=H-TS

Effect of T on Balance of Forces

Free

ene

rgy

chan

ge fo

r den

atur

atio

n

T

+ (oppose)

- (favor)Chain entropy effect

Solvent entropy effect

Thermal Denaturation

• Trypsinogen 55°C• Pepsinogen 60°C• Lysozyme 72°C• Myoglobin 79°C• Soy Glycinin 92°C• Oat globulin 108°C

Table 11

Affected by pH, water, solutes

Why is Denaturation Sudden?

Concentration of denaturant or temperature

100%

0%

Nat

ive

Stru

ctur

e

Critical value

COOPERATIVE PROCESS

Partly denatured structure is weaker so begins to change faster

Types of Denaturation

• Temperature• Organic solvents• Surface• pH• Shear

Reversibility?One native form

Many denatured forms

Refolding is a complex process – particularly for large proteins or complex proteins

Energy Surface

Changes in Conformation

Free

ene

rgy

One native state (true energy minimum)

Many secondary minima amongst denatured states

Behavior of Denatured ProteinHydrophobic core

Hydrophilic surface

NATIVE

AGGREGATEDor other ingredient interactions

DENATURED

Unfolding forces some hydrophobic AA to surface

Fast under non-physiological conditions

Slow under physiological conditions

Consequences of Denaturation

• Loss of enzymatic activity (death)• Destruction of toxins• Improved digestibility• Loss of solubility• Changes in texture

Denaturation

• The conversion of a biologically functional molecule into a non-functional form

• There are many denatured states but one native state

• Proteins can regenerate to their native state but slowly

• Denatured proteins have a greater tendency to aggregate.