Jodi Humann, Stephen Ficklin, Taein Lee, Chun-Huai Cheng, Jill Wegrzyn, David Neale and Dorrie Main...

Jodi Humann, Stephen Ficklin, Taein Lee, Chun-Huai Cheng, Jill Wegrzyn, David Neale and Dorrie Main

A web-based platform for genome annotation

GenSAS PosterP1153, Monday, 3-4:30 PM

Genome Sequence Annotation Server

http://gensas.bioinfo.wsu.edu/

GenSAS welcome tab provides users with a quick overview of what each of the three screen sections do.

Each tab has an instructions section at the top that explains the function and use of the tab.

The addition of support files increase the accuracy of the

annotation and curation

Clicking on Job Name shows user more details and allows for download of raw output files and logs

• Decide which set(s) of masking data will be included in consensus by opening WebApollo through link on right

• Masking step can also be skipped

Consensus masking job is added to Job Queue and the details list which sets of masking data were included.

• Settings for each tool can be adjusted

• Job Names for each tool can be changed to allow users to run the same tool with different settings under one project

• GenSAS provides some standard transcript and protein databases• Databases added by user under Files step will also be

available for use here

• Job status can be monitored through Job Queue

• Progress through GenSAS is automatically saved

• Users can log off GenSAS and jobs will continue running

• While jobs are running, users can look at the completed results in WebApollo/JBrowse

GenSAS exports data in GFF3 and FASTA formats

Supported by

- NRSP 10