AgArose - MAT UC Santa Barbarag.legrady/academic/... · AgArose CNsI wall project @ MAT M200a...

AgAroseCNsI wall project @ MAT M200a

YuanYi Fan | PhD student | dannyfan@mat.ucsb.edu | www.mat.ucsb.edu/dannyfan

MetaphorAgarose is a transparent solution in electrophoresis, which is the basic ele-ment in biochemistry experiment, while Biochemistry is one major research branch in CNsI building.

The appearance of CNsI building corner, when you drive by, a dysfunction wall is installed as an information barrier, leaving drivers and passengers in doubts.

By being transparent, information symmetry should be embodied virtually and physically.

Concept The idea originates from electrophoresis in both form and function.

To unfold the biological mystery, revelation of bioinformation starts from the very basic laboratory routines like protein separation.

The physicality of the proposed installation mimics electrophoresis in both its mechanism and appearance.

FunctionThe Wall, as an interface, should be visually penetrated, and that is made possible by technology of holography. Holography technology embodies the ideal wall in a physically transparent and virtually informative way.

Boundary of new knowledge can thus be transformed and expressed to cul-tivate interdisciplinary cooperation. In practice, scientific visualization fa-cilitates prevalence of knowledge and reflection upon perspectives to a phenomenon.

MAT serves a role in interpretation of scientific data.

electrophoresis mainly refers to gel electropho-resis, which is a technique for the separation of deoxyribonucleic acid(DNA), ribonucleic acid(rNA), or protein molecules using a elec-tric field applied to a gel matrix. DNA gel separation is usually per-formed for analytical purposes but may be used as a preparative tech-nique prior to other methods for further characterization.

IMeD developed by Tom soh Laboratorygenetic detection at the point of care

elements of inspiration

HolographyA technique that allows light scattered from an object to be recorded and later reconstructed so that it appears as if the object is in the same position relative to the recording medium as it was when re-corded

Holography tech specificationProduct example- Free Format by VizooDimension- 800 x 220 cmImage size- 700 x approx. 200 cmViewing angle- 180 degreeAudio- depend on player system

our wall dimension- approx. 18 x 10 mPurpose: reconstructed video or scientific visualization

3D visualization of the proposed wall

2-D Visualization of electrophoresis using Processing

MethodAs agarose in the electrophoresis container, information carriers, such as protein, penetrate through gel matrix at different speed due to molecular size, and later dyed with fluorescence materials.

In a simple case, simulated visualization of electrophoresis can be realized in Processing. Driving force can be simulated using any information flow that is representative of the building and people inside it.

reference http://www.vizoo.com/ http://en.wikipedia.org/wiki/Holography http://en.wikipedia.org/wiki/electrophoresis http://engineering.ucsb.edu/sohlab/publications.html

Acknowledgement george Legrady Andres Burbano Feedback from M200a

AgArose - MAT UC Santa Barbarag.legrady/academic/... · AgArose CNsI wall project @ MAT M200a...

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